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CAN33_53060-T1, CAN33_53060-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_53060-T1
Unique NameCAN33_53060-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1899640..1900109-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_53060-T1 ID=CAN33_53060-T1|Name=CAN33_53060-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=470bp|location=Sequence derived from alignment at NKJJ01000020.1:1899640..1900109- (Aspergillus niger FDAARGOS_311)
ATGCCCAAGGAGAAGACCACCCGCAAGACCAAGCCCCGTGGCACTGAGCG CAGAAAGAAGGGTATGTATGCCTTGCTCTATCTTCGGAACTCATGCTAAT GCATAGCTCAGACCCCAACGCTCCCAAGCGTGGTCTCTCTGCCTACATGT TCTTCGCCAACGACAACCGTGAGAAGGTTCGCGAGGAGAACCCTGGCATC TCTTTCGGTAAGTCACTTCTGGACCTTGAATGGGAATGTAGGCGTCTAAC TTCATGCAGGCCAAGTCGGCAAGATGCTCGGAGAGCGGTGGAAGGCTCTG AGCGACACTGACCGTCGCCCTTACGAGGAGAAGGCTGCCGCTGATAAGAA GCGTTACGAAGACGAGAAGGCCAGCTACAACGTAAGTTGACACTCCTGCC GTTTCTTTGTCAGCCAATGCTAATGAACTTTGAACAGGCGGCTGCTGAGG AGGACGAGGAATCATCCTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:1899640..1900109-

>CAN33_53060-T1 ID=CAN33_53060-T1|Name=CAN33_53060-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1248bp|location=Sequence derived from alignment at NKJJ01000020.1:1899640..1900109- (Aspergillus niger FDAARGOS_311)
GCGGCTGCTGAGGAGGACGAGGAATCATCCTAAGCCAAGTCGGCAAGATG
CTCGGAGAGCGGTGGAAGGCTCTGAGCGACACTGACCGTCGCCCTTACGA
GGAGAAGGCTGCCGCTGATAAGAAGCGTTACGAAGACGAGAAGGCCAGCT
ACAACACCCCAACGCTCCCAAGCGTGGTCTCTCTGCCTACATGTTCTTCG
CCAACGACAACCGTGAGAAGGTTCGCGAGGAGAACCCTGGCATCTCTTTC
GATGCCCAAGGAGAAGACCACCCGCAAGACCAAGCCCCGTGGCACTGAGC
GCAGAAAGAAGGGCGGCTGCTGAGGAGGACGAGGAATCATCCTAAGCCAA
GTCGGCAAGATGCTCGGAGAGCGGTGGAAGGCTCTGAGCGACACTGACCG
TCGCCCTTACGAGGAGAAGGCTGCCGCTGATAAGAAGCGTTACGAAGACG
AGAAGGCCAGCTACAACACCCCAACGCTCCCAAGCGTGGTCTCTCTGCCT
ACATGTTCTTCGCCAACGACAACCGTGAGAAGGTTCGCGAGGAGAACCCT
GGCATCTCTTTCGATGCCCAAGGAGAAGACCACCCGCAAGACCAAGCCCC
GTGGCACTGAGCGCAGAAAGAAGGGCGGCTGCTGAGGAGGACGAGGAATC
ATCCTAAGCCAAGTCGGCAAGATGCTCGGAGAGCGGTGGAAGGCTCTGAG
CGACACTGACCGTCGCCCTTACGAGGAGAAGGCTGCCGCTGATAAGAAGC
GTTACGAAGACGAGAAGGCCAGCTACAACACCCCAACGCTCCCAAGCGTG
GTCTCTCTGCCTACATGTTCTTCGCCAACGACAACCGTGAGAAGGTTCGC
GAGGAGAACCCTGGCATCTCTTTCGATGCCCAAGGAGAAGACCACCCGCA
AGACCAAGCCCCGTGGCACTGAGCGCAGAAAGAAGGGCGGCTGCTGAGGA
GGACGAGGAATCATCCTAAGCCAAGTCGGCAAGATGCTCGGAGAGCGGTG
GAAGGCTCTGAGCGACACTGACCGTCGCCCTTACGAGGAGAAGGCTGCCG
CTGATAAGAAGCGTTACGAAGACGAGAAGGCCAGCTACAACACCCCAACG
CTCCCAAGCGTGGTCTCTCTGCCTACATGTTCTTCGCCAACGACAACCGT
GAGAAGGTTCGCGAGGAGAACCCTGGCATCTCTTTCGATGCCCAAGGAGA
AGACCACCCGCAAGACCAAGCCCCGTGGCACTGAGCGCAGAAAGAAGG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NHP6CAN33_53060Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53060-T1CAN33_53060-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53060-T1.cdsCAN33_53060-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53060-T1.exon4CAN33_53060-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_53060-T1.exon3CAN33_53060-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_53060-T1.exon2CAN33_53060-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_53060-T1.exon1CAN33_53060-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036910
DBxrefInterPro:IPR009071
DBxrefPFAM:PF09011
DBxrefPFAM:PF00505
ProductNon-histone chromosomal protein 6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1899640..1900109 -