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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:1962388..1963169- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_53165-T1 ID=CAN33_53165-T1|Name=CAN33_53165-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=782bp|location=Sequence derived from alignment at NKJJ01000020.1:1962388..1963169- (Aspergillus niger FDAARGOS_311)
ATGGCATCCTTCATGCAGTCTCTGCCGGTCTGCTCGGCCACTCGCAAGCA
GTCAACCGCTGTTCCCTTTTATTTGCAAAAAGCTTCACAGTCCAGAGTCT
CGTCAGGGACGCGTAGCTCCTTCTCTTCGCTATGTTCTTCCGCTAGATTG
ACCCCCTCTCGTAAGTCGCGACCCTTTCCGTCCGTTCCACCCACGGCCTA
TCCCATCGGGATAGTAAGCATGGCTGTTTCTGAGCAGCAAATACCTGGAG
GGTAACAAAAAGAATCCGTCGAGCTTTTCCTGACTTGCTCTTAGAACTCG
CTTCTCGTCACTCCTCCCAAATCACCTCTCAGCCCCAAGTTGCCGCCCAG
CAATGTCGGACTTTCCTCGTTCAACTCAAGCGGCAATCTCAGACTCTTAA
GGAAACCCCGGTATCGCAACCGCCGCCCAACCTGCAACTCACAAACCTCC
CTTATTTCATCCGTCGCACAGCCTCCAACCAACTCCCCGTATATCTTGTT
ACCAAGGCCGGCGGTACCAAGCAACAAACCAAGCTCCAGAAGACTGAAGG
CGATTTGGATGCCCTGAGGAACGATCTGGCGCAGTACCTGGGACTGGAGT
CGGGTGACCCCCGCGCTCCCAAGAGCCCGGATGTCACTATTAACCGTCTT
AACGGTCACATCATTGTCAAGGTACGTCCTCTACGATCTGCCAGTTGATC
ACGGCCGAGCTAACCGGATTGCTTTACTTAGGGCTGGCGCAAACCTGAGA
TCCTGAAGTTCCTTCAGGAACGCAACTTCTAA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:1962388..1963169- >CAN33_53165-T1 ID=CAN33_53165-T1|Name=CAN33_53165-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1764bp|location=Sequence derived from alignment at NKJJ01000020.1:1962388..1963169- (Aspergillus niger FDAARGOS_311)
GGCTGGCGCAAACCTGAGATCCTGAAGTTCCTTCAGGAACGCAACTTCTA
AAACTCGCTTCTCGTCACTCCTCCCAAATCACCTCTCAGCCCCAAGTTGC
CGCCCAGCAATGTCGGACTTTCCTCGTTCAACTCAAGCGGCAATCTCAGA
CTCTTAAGGAAACCCCGGTATCGCAACCGCCGCCCAACCTGCAACTCACA
AACCTCCCTTATTTCATCCGTCGCACAGCCTCCAACCAACTCCCCGTATA
TCTTGTTACCAAGGCCGGCGGTACCAAGCAACAAACCAAGCTCCAGAAGA
CTGAAGGCGATTTGGATGCCCTGAGGAACGATCTGGCGCAGTACCTGGGA
CTGGAGTCGGGTGACCCCCGCGCTCCCAAGAGCCCGGATGTCACTATTAA
CCGTCTTAACGGTCACATCATTGTCAAGATGGCATCCTTCATGCAGTCTC
TGCCGGTCTGCTCGGCCACTCGCAAGCAGTCAACCGCTGTTCCCTTTTAT
TTGCAAAAAGCTTCACAGTCCAGAGTCTCGTCAGGGACGCGTAGCTCCTT
CTCTTCGCTATGTTCTTCCGCTAGATTGACCCCCTCTCGGCTGGCGCAAA
CCTGAGATCCTGAAGTTCCTTCAGGAACGCAACTTCTAAAACTCGCTTCT
CGTCACTCCTCCCAAATCACCTCTCAGCCCCAAGTTGCCGCCCAGCAATG
TCGGACTTTCCTCGTTCAACTCAAGCGGCAATCTCAGACTCTTAAGGAAA
CCCCGGTATCGCAACCGCCGCCCAACCTGCAACTCACAAACCTCCCTTAT
TTCATCCGTCGCACAGCCTCCAACCAACTCCCCGTATATCTTGTTACCAA
GGCCGGCGGTACCAAGCAACAAACCAAGCTCCAGAAGACTGAAGGCGATT
TGGATGCCCTGAGGAACGATCTGGCGCAGTACCTGGGACTGGAGTCGGGT
GACCCCCGCGCTCCCAAGAGCCCGGATGTCACTATTAACCGTCTTAACGG
TCACATCATTGTCAAGATGGCATCCTTCATGCAGTCTCTGCCGGTCTGCT
CGGCCACTCGCAAGCAGTCAACCGCTGTTCCCTTTTATTTGCAAAAAGCT
TCACAGTCCAGAGTCTCGTCAGGGACGCGTAGCTCCTTCTCTTCGCTATG
TTCTTCCGCTAGATTGACCCCCTCTCGGCTGGCGCAAACCTGAGATCCTG
AAGTTCCTTCAGGAACGCAACTTCTAAAACTCGCTTCTCGTCACTCCTCC
CAAATCACCTCTCAGCCCCAAGTTGCCGCCCAGCAATGTCGGACTTTCCT
CGTTCAACTCAAGCGGCAATCTCAGACTCTTAAGGAAACCCCGGTATCGC
AACCGCCGCCCAACCTGCAACTCACAAACCTCCCTTATTTCATCCGTCGC
ACAGCCTCCAACCAACTCCCCGTATATCTTGTTACCAAGGCCGGCGGTAC
CAAGCAACAAACCAAGCTCCAGAAGACTGAAGGCGATTTGGATGCCCTGA
GGAACGATCTGGCGCAGTACCTGGGACTGGAGTCGGGTGACCCCCGCGCT
CCCAAGAGCCCGGATGTCACTATTAACCGTCTTAACGGTCACATCATTGT
CAAGATGGCATCCTTCATGCAGTCTCTGCCGGTCTGCTCGGCCACTCGCA
AGCAGTCAACCGCTGTTCCCTTTTATTTGCAAAAAGCTTCACAGTCCAGA
GTCTCGTCAGGGACGCGTAGCTCCTTCTCTTCGCTATGTTCTTCCGCTAG
ATTGACCCCCTCTC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007740 |
| DBxref | PFAM:PF05046 |
| Product | Mitochondrial large subunit ribosomal protein (Img2) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:1962388..1963169 - |
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