CAN33_53185-T1, CAN33_53185-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview


Name	CAN33_53185-T1
Unique Name	CAN33_53185-T1
Type	mRNA
Organism	Aspergillus niger FDAARGOS_311

Sequences

The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1975306..1977344+
coding sequence from alignment at NKJJ01000020.1:1975306..1977344+

mRNA from alignment at NKJJ01000020.1:1975306..1977344+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>CAN33_53185-T1 ID=CAN33_53185-T1|Name=CAN33_53185-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2039bp|location=Sequence derived from alignment at NKJJ01000020.1:1975306..1977344+ (Aspergillus niger FDAARGOS_311)
ATGTCTGCGGCTGTTACTTCGACCGTTTCGACCAGTCTAACTAATCATAC
CGATACTCGTAATTCTACCCCAATGGATGCGAAAAAGGCGGGTCTAGACG
AAGGTGAGTGTTGTGCATCTTTATGAAAAAACTGTTTCGATCCTTCGTTT
TGCGCGCGTGGAACTCTGGTACCTCCCATGCCCCAAACTCCCGAATATCT
GCTGTATCTTGCACTTCCTTACTTCATCATCGACCCTTGACCTGTTCTGG
CTTGGTTGTACGCCACTGTTCCCCCAAATGTTCTGTTGACTACCCGCCGC
CGTCGGGATGACCTCACAATTGGCGTCATCGATGGGGGGTCACTGTTATC
AGATCCCCTTCCTCTCAGACTTCGGCCTGGACCGCCTCATTTGGCCAACC
TCTTTCATTCTACCCCTGTTTCAGATAACCTCACTGTCGCGTACTTCATC
ATCGTCATTGTTATTGTCGTTGTCGGTGTTGTCATACTAACGCGCACATT
TGCTCCGGATACAGACTCCCGGGCGACCTCTTCGGATCTTAAAGATACCA
AGCCTGATGTAGATCCTCAAACCTCGTTGGCGCCGCCTCCGCGACCAGCC
ATAACAAGCGCGACTGATACCCCCGATTACTTCAACTCCGTCCACAACCC
TTTCTCTCTGGAACCCAATCCCTTCGAGCAATCTTTCGGCAGTGGTGGTT
CCTCGGGCGAAACACCCGGAAAGTCGATCCTTCCTCCTGTTGCAGCACTT
ACTTCTCCTGCCCTGCCGGGCACAAGCTCTGCCGGTGGCGGCTACGGCTG
GTCCAACTCTCTGCGCTCCGGGCCGCTGAGTCCTGCTATGCTCGCCGGCC
CGACTGGCACGAGCGATTATTTTGACAGTATTGGCAGGGGCTTCCCTACC
CCTAACGAGTCTTCTCTCCGCACTGGATTGACCCCGGGCGGAGGGGGGTC
TATGTTTCCTGCTCCTAGCCCCAACTCTCAGGCACTCCTGCAGCAGCTGC
AGAGTGGTGGTGCGACACCGTCGACCATTGAGTTTCACCGTACTGCTCTT
AACGCTGCCAAGAAGAACAGCTTAGGTGGCCCAACCTCTAACCCCACTTC
CGAACCTGATCCAGCGACGCAAAACTCCAATATGGATATTAAGCCGAACC
CGCCTGCAGGTTCCGACCCATTTGGTCATCATGACGCTGCTGATGCGGCT
AACGGGCTTTTCATGCTGGCCAAGGGCGGACAGGCGAACCCCAATCAGTT
CACTGTATCGAACCAAGCATCGATTCAGCCACAAAGTATTCAGGCCAATG
ACCAGCAACTTGATGCTGGCGCCGATAGACGTAACTCGCAAAACATGAAT
GGTGTATCAGGCAGAGAGACCAGCGGTGACGCCTCTGACATGCAGGGTGA
GCAGACGAAGCCCGCTGCCAAGGGCAAAGCCAAAAAGAACACTGGCACAA
AAGCCAGCACCGCAGCAAACAACAGGCGCAAAGCAGAAGATGCACCTAAG
GGTTCAAACAAGAAGGCCAAAACGAGTAACGGGTCTGGTAGTGTTGAGCC
TCCTTCCGATGTTGGGGATTCCGAAGACGATGAAGATGATATGAAGAGAA
AGAACTCGACAGACACGAAGAAAATGACTGATGAAGAGAAGAGAAAGAAC
TTTCTCGAGAGGAACAGGTAAGAAGCGCTTTTTACCATTTGGTGCGTTCA
AGTTATTGGCTTGGTGCTAACGTTCTTTGTAGGGTTGCGGCGCTCAAGTG
TCGCCAGCGAAAGAAGCAGTGGCTTGCCAACCTTCAAGCGAAGGTGGAAT
TGTTCACCTCCGAGAATGATGCGCTTACCGCCACTGTCACGCAGCTCCGT
GAGGAAATCGTCAATCTCAAGACTTTGTTGCTTGCGCATAAAGACTGCCC
AGTCTCCCAGGCCCAAGGTTTAGGCCCTCTCATGATGAATGGCATGTCGG
CAGGATTTGATGCGCATCCATACAACATCCCTAACGGTATGGCAATGCAA
CCTGGAGCACCTATCCCTGCTCAGGGGCTACGACGGTAA

Coding sequence (CDS) from alignment at NKJJ01000020.1:1975306..1977344+

>CAN33_53185-T1 ID=CAN33_53185-T1|Name=CAN33_53185-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4554bp|location=Sequence derived from alignment at NKJJ01000020.1:1975306..1977344+ (Aspergillus niger FDAARGOS_311)
ATGTCTGCGGCTGTTACTTCGACCGTTTCGACCAGTCTAACTAATCATAC
CGATACTCGTAATTCTACCCCAATGGATGCGAAAAAGGCGGGTCTAGACG
AAGATAACCTCACTGTCGCGTACTTCATCATCGTCATTGTTATTGTCGTT
GTCGGTGTTGTCATACTAACGCGCACATTTGCTCCGGATACAGACTCCCG
GGCGACCTCTTCGGATCTTAAAGATACCAAGCCTGATGTAGATCCTCAAA
CCTCGTTGGCGCCGCCTCCGCGACCAGCCATAACAAGCGCGACTGATACC
CCCGATTACTTCAACTCCGTCCACAACCCTTTCTCTCTGGAACCCAATCC
CTTCGAGCAATCTTTCGGCAGTGGTGGTTCCTCGGGCGAAACACCCGGAA
AGTCGATCCTTCCTCCTGTTGCAGCACTTACTTCTCCTGCCCTGCCGGGC
ACAAGCTCTGCCGGTGGCGGCTACGGCTGGTCCAACTCTCTGCGCTCCGG
GCCGCTGAGTCCTGCTATGCTCGCCGGCCCGACTGGCACGAGCGATTATT
TTGACAGTATTGGCAGGGGCTTCCCTACCCCTAACGAGTCTTCTCTCCGC
ACTGGATTGACCCCGGGCGGAGGGGGGTCTATGTTTCCTGCTCCTAGCCC
CAACTCTCAGGCACTCCTGCAGCAGCTGCAGAGTGGTGGTGCGACACCGT
CGACCATTGAGTTTCACCGTACTGCTCTTAACGCTGCCAAGAAGAACAGC
TTAGGTGGCCCAACCTCTAACCCCACTTCCGAACCTGATCCAGCGACGCA
AAACTCCAATATGGATATTAAGCCGAACCCGCCTGCAGGTTCCGACCCAT
TTGGTCATCATGACGCTGCTGATGCGGCTAACGGGCTTTTCATGCTGGCC
AAGGGCGGACAGGCGAACCCCAATCAGTTCACTGTATCGAACCAAGCATC
GATTCAGCCACAAAGTATTCAGGCCAATGACCAGCAACTTGATGCTGGCG
CCGATAGACGTAACTCGCAAAACATGAATGGTGTATCAGGCAGAGAGACC
AGCGGTGACGCCTCTGACATGCAGGGTGAGCAGACGAAGCCCGCTGCCAA
GGGCAAAGCCAAAAAGAACACTGGCACAAAAGCCAGCACCGCAGCAAACA
ACAGGCGCAAAGCAGAAGATGCACCTAAGGGTTCAAACAAGAAGGCCAAA
ACGAGTAACGGGGTTGCGGCGCTCAAGTGTCGCCAGCGAAAGAAGCAGTG
GCTTGCCAACCTTCAAGCGAAGGTGGAATTGTTCACCTCCGAGAATGATG
CGCTTACCGCCACTGTCACGCAGCTCCGTGAGGAAATCGTCAATCTCAAG
ACTTTGTTGCTTGCGCATAAAGACTGCCCAGTCTCCCAGGCCCAAGGTTT
AGGCCCTCTCATGATGAATGGCATGTCGGCAGGATTTGATGCGCATCCAT
ACAACATCCCTAACGGTATGGCAATGCAACCTGGAGCACCTATCCCTGCT
CAGGGGCTACGACGGTAAATGTCTGCGGCTGTTACTTCGACCGTTTCGAC
CAGTCTAACTAATCATACCGATACTCGTAATTCTACCCCAATGGATGCGA
AAAAGGCGGGTCTAGACGAAGATAACCTCACTGTCGCGTACTTCATCATC
GTCATTGTTATTGTCGTTGTCGGTGTTGTCATACTAACGCGCACATTTGC
TCCGGATACAGACTCCCGGGCGACCTCTTCGGATCTTAAAGATACCAAGC
CTGATGTAGATCCTCAAACCTCGTTGGCGCCGCCTCCGCGACCAGCCATA
ACAAGCGCGACTGATACCCCCGATTACTTCAACTCCGTCCACAACCCTTT
CTCTCTGGAACCCAATCCCTTCGAGCAATCTTTCGGCAGTGGTGGTTCCT
CGGGCGAAACACCCGGAAAGTCGATCCTTCCTCCTGTTGCAGCACTTACT
TCTCCTGCCCTGCCGGGCACAAGCTCTGCCGGTGGCGGCTACGGCTGGTC
CAACTCTCTGCGCTCCGGGCCGCTGAGTCCTGCTATGCTCGCCGGCCCGA
CTGGCACGAGCGATTATTTTGACAGTATTGGCAGGGGCTTCCCTACCCCT
AACGAGTCTTCTCTCCGCACTGGATTGACCCCGGGCGGAGGGGGGTCTAT
GTTTCCTGCTCCTAGCCCCAACTCTCAGGCACTCCTGCAGCAGCTGCAGA
GTGGTGGTGCGACACCGTCGACCATTGAGTTTCACCGTACTGCTCTTAAC
GCTGCCAAGAAGAACAGCTTAGGTGGCCCAACCTCTAACCCCACTTCCGA
ACCTGATCCAGCGACGCAAAACTCCAATATGGATATTAAGCCGAACCCGC
CTGCAGGTTCCGACCCATTTGGTCATCATGACGCTGCTGATGCGGCTAAC
GGGCTTTTCATGCTGGCCAAGGGCGGACAGGCGAACCCCAATCAGTTCAC
TGTATCGAACCAAGCATCGATTCAGCCACAAAGTATTCAGGCCAATGACC
AGCAACTTGATGCTGGCGCCGATAGACGTAACTCGCAAAACATGAATGGT
GTATCAGGCAGAGAGACCAGCGGTGACGCCTCTGACATGCAGGGTGAGCA
GACGAAGCCCGCTGCCAAGGGCAAAGCCAAAAAGAACACTGGCACAAAAG
CCAGCACCGCAGCAAACAACAGGCGCAAAGCAGAAGATGCACCTAAGGGT
TCAAACAAGAAGGCCAAAACGAGTAACGGGGTTGCGGCGCTCAAGTGTCG
CCAGCGAAAGAAGCAGTGGCTTGCCAACCTTCAAGCGAAGGTGGAATTGT
TCACCTCCGAGAATGATGCGCTTACCGCCACTGTCACGCAGCTCCGTGAG
GAAATCGTCAATCTCAAGACTTTGTTGCTTGCGCATAAAGACTGCCCAGT
CTCCCAGGCCCAAGGTTTAGGCCCTCTCATGATGAATGGCATGTCGGCAG
GATTTGATGCGCATCCATACAACATCCCTAACGGTATGGCAATGCAACCT
GGAGCACCTATCCCTGCTCAGGGGCTACGACGGTAAATGTCTGCGGCTGT
TACTTCGACCGTTTCGACCAGTCTAACTAATCATACCGATACTCGTAATT
CTACCCCAATGGATGCGAAAAAGGCGGGTCTAGACGAAGATAACCTCACT
GTCGCGTACTTCATCATCGTCATTGTTATTGTCGTTGTCGGTGTTGTCAT
ACTAACGCGCACATTTGCTCCGGATACAGACTCCCGGGCGACCTCTTCGG
ATCTTAAAGATACCAAGCCTGATGTAGATCCTCAAACCTCGTTGGCGCCG
CCTCCGCGACCAGCCATAACAAGCGCGACTGATACCCCCGATTACTTCAA
CTCCGTCCACAACCCTTTCTCTCTGGAACCCAATCCCTTCGAGCAATCTT
TCGGCAGTGGTGGTTCCTCGGGCGAAACACCCGGAAAGTCGATCCTTCCT
CCTGTTGCAGCACTTACTTCTCCTGCCCTGCCGGGCACAAGCTCTGCCGG
TGGCGGCTACGGCTGGTCCAACTCTCTGCGCTCCGGGCCGCTGAGTCCTG
CTATGCTCGCCGGCCCGACTGGCACGAGCGATTATTTTGACAGTATTGGC
AGGGGCTTCCCTACCCCTAACGAGTCTTCTCTCCGCACTGGATTGACCCC
GGGCGGAGGGGGGTCTATGTTTCCTGCTCCTAGCCCCAACTCTCAGGCAC
TCCTGCAGCAGCTGCAGAGTGGTGGTGCGACACCGTCGACCATTGAGTTT
CACCGTACTGCTCTTAACGCTGCCAAGAAGAACAGCTTAGGTGGCCCAAC
CTCTAACCCCACTTCCGAACCTGATCCAGCGACGCAAAACTCCAATATGG
ATATTAAGCCGAACCCGCCTGCAGGTTCCGACCCATTTGGTCATCATGAC
GCTGCTGATGCGGCTAACGGGCTTTTCATGCTGGCCAAGGGCGGACAGGC
GAACCCCAATCAGTTCACTGTATCGAACCAAGCATCGATTCAGCCACAAA
GTATTCAGGCCAATGACCAGCAACTTGATGCTGGCGCCGATAGACGTAAC
TCGCAAAACATGAATGGTGTATCAGGCAGAGAGACCAGCGGTGACGCCTC
TGACATGCAGGGTGAGCAGACGAAGCCCGCTGCCAAGGGCAAAGCCAAAA
AGAACACTGGCACAAAAGCCAGCACCGCAGCAAACAACAGGCGCAAAGCA
GAAGATGCACCTAAGGGTTCAAACAAGAAGGCCAAAACGAGTAACGGGGT
TGCGGCGCTCAAGTGTCGCCAGCGAAAGAAGCAGTGGCTTGCCAACCTTC
AAGCGAAGGTGGAATTGTTCACCTCCGAGAATGATGCGCTTACCGCCACT
GTCACGCAGCTCCGTGAGGAAATCGTCAATCTCAAGACTTTGTTGCTTGC
GCATAAAGACTGCCCAGTCTCCCAGGCCCAAGGTTTAGGCCCTCTCATGA
TGAATGGCATGTCGGCAGGATTTGATGCGCATCCATACAACATCCCTAAC
GGTATGGCAATGCAACCTGGAGCACCTATCCCTGCTCAGGGGCTACGACG
GTAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	DNA-binding transcription factor activity
GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CAN33_53185	CAN33_53185	Aspergillus niger FDAARGOS_311	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_53185-T1.exon1	CAN33_53185-T1.exon1	Aspergillus niger FDAARGOS_311	exon
CAN33_53185-T1.exon2	CAN33_53185-T1.exon2	Aspergillus niger FDAARGOS_311	exon
CAN33_53185-T1.exon3	CAN33_53185-T1.exon3	Aspergillus niger FDAARGOS_311	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_53185-T1.cds	CAN33_53185-T1.cds	Aspergillus niger FDAARGOS_311	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_53185-T1	CAN33_53185-T1-protein	Aspergillus niger FDAARGOS_311	polypeptide

Properties


Property Name	Value
DBxref	InterPro:IPR021756
DBxref	InterPro:IPR021755
DBxref	InterPro:IPR020956
DBxref	InterPro:IPR004827
DBxref	InterPro:IPR002112
DBxref	PFAM:PF00170
DBxref	PFAM:PF11785
DBxref	PFAM:PF11787
DBxref	PFAM:PF11786
Product	Aft1 HRA domain family protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger FDAARGOS_311 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NKJJ01000020.1	supercontig	NKJJ01000020.1:1975306..1977344 +

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CAN33_53185-T1, CAN33_53185-T1 (mRNA) Aspergillus niger FDAARGOS_311