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CAN33_53305-T1, CAN33_53305-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_53305-T1
Unique NameCAN33_53305-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2067239..2068269-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_53305-T1 ID=CAN33_53305-T1|Name=CAN33_53305-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1031bp|location=Sequence derived from alignment at NKJJ01000020.1:2067239..2068269- (Aspergillus niger FDAARGOS_311)
ATGTCGGTCGTTTCTCTTCTTGGCGTGAAAATCGTCAATAATCCTGCCTC
TTTCCTCGACCCCTATCAATTTGAGATCACTTTCGAATGTCTTGAACAGC
TGCAGAAAGGTACGCTGTGAACCCCGCTCCCGTTAATTGGCCGCCACTAA
CGAGTTTCCAGATCTGGAGTGGAAGCTCACCTACGTCGGTTCGGCGACAT
CGTAAGTTGGACCTGAAGCGAGATAAAATCAGATCTATCTGCTAACCACC
TGTTTCTCTAGCTCCGAGTATGACCAGGAACTCGACTCCCTGCTGGTGGG
ACCGATCCCCGTTGGTGTCAACAAGTTCATCTTCGAGGCCGACCCCCCAG
ACCTCAAGCGCATCCCTACTTCCGAAATCCTGGGAGTTACCGTGATTCTC
CTCACTTGCAGCTATGACGGCAGAGAATTCGTTCGTGTCGGTTACTATGT
AAACAACGAATACGATTCCGAGGAGCTTATGGAGCAGCCGCCGGCTCGGC
CGATCATCGAACGCATTCGTCGGAATATCCTTGCTGAGAAGCCCAGAGTA
ACCCGGTTTGCCATCAAATGGTAGGTATCATCTATTTGTTTTTCTTGTCA
TACGATACTAATAACTACCGCCTAGGGACTCGGAGGAATCTGCCCCCGCT
GAATACCCGCCAGATCAGCCCGAAGCCGACCAGGAGGGAGATGACAGTGC
CGCCTACGGTGCAGAGGAAGCAGAGCTTGAAGCAGCCCTCTTCAAGGAGC
TCAACGAGCTGGAGCCTAAGACCGAAGATCAGGAGATGGAGGGAACCGAA
GGCCCTGCCACCAAGGAAGAAGAGGAGGAAGATATCTCGGATGCCGAGTC
TGAGGACATCGAAGATGAGAGTGACGAAGATGAGGAGGAACTCGACGAGG
AAGAGGGCGACGACGGCGATGAGGACGTCGAAATGGGCGATGATTCCGAG
CAGAAGGATGAATCAGCCGGAGGCGCCAGCAACAACAACCCGGCGGCCCA
TCAACAACAGCCCGAGTTGATGGTGCACTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:2067239..2068269-

>CAN33_53305-T1 ID=CAN33_53305-T1|Name=CAN33_53305-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3840bp|location=Sequence derived from alignment at NKJJ01000020.1:2067239..2068269- (Aspergillus niger FDAARGOS_311)
CCGGAGGCGCCAGCAACAACAACCCGGCGGCCCATCAACAACAGCCCGAG
TTGATGGTGCACTAAGGACTCGGAGGAATCTGCCCCCGCTGAATACCCGC
CAGATCAGCCCGAAGCCGACCAGGAGGGAGATGACAGTGCCGCCTACGGT
GCAGAGGAAGCAGAGCTTGAAGCAGCCCTCTTCAAGGAGCTCAACGAGCT
GGAGCCTAAGACCGAAGATCAGGAGATGGAGGGAACCGAAGGCCCTGCCA
CCAAGGAAGAAGAGGAGGAAGATATCTCGGATGCCGAGTCTGAGGACATC
GAAGATGAGACTCCGAGTATGACCAGGAACTCGACTCCCTGCTGGTGGGA
CCGATCCCCGTTGGTGTCAACAAGTTCATCTTCGAGGCCGACCCCCCAGA
CCTCAAGCGCATCCCTACTTCCGAAATCCTGGGAGTTACCGTGATTCTCC
TCACTTGCAGCTATGACGGCAGAGAATTCGTTCGTGTCGGTTACTATGTA
AACAACGAATACGATTCCGAGGAGCTTATGGAGCAGCCGCCGGCTCGGCC
GATCATCGAACGCATTCGTCGGAATATCCTTGCTGAGAAGCCCAGAGTAA
CCCGGTTTGCCATCAAATGATCTGGAGTGGAAGCTCACCTACGTCGGTTC
GGCGACATCATGTCGGTCGTTTCTCTTCTTGGCGTGAAAATCGTCAATAA
TCCTGCCTCTTTCCTCGACCCCTATCAATTTGAGATCACTTTCGAATGTC
TTGAACAGCTGCAGAAAGCCGGAGGCGCCAGCAACAACAACCCGGCGGCC
CATCAACAACAGCCCGAGTTGATGGTGCACTAAGGACTCGGAGGAATCTG
CCCCCGCTGAATACCCGCCAGATCAGCCCGAAGCCGACCAGGAGGGAGAT
GACAGTGCCGCCTACGGTGCAGAGGAAGCAGAGCTTGAAGCAGCCCTCTT
CAAGGAGCTCAACGAGCTGGAGCCTAAGACCGAAGATCAGGAGATGGAGG
GAACCGAAGGCCCTGCCACCAAGGAAGAAGAGGAGGAAGATATCTCGGAT
GCCGAGTCTGAGGACATCGAAGATGAGACTCCGAGTATGACCAGGAACTC
GACTCCCTGCTGGTGGGACCGATCCCCGTTGGTGTCAACAAGTTCATCTT
CGAGGCCGACCCCCCAGACCTCAAGCGCATCCCTACTTCCGAAATCCTGG
GAGTTACCGTGATTCTCCTCACTTGCAGCTATGACGGCAGAGAATTCGTT
CGTGTCGGTTACTATGTAAACAACGAATACGATTCCGAGGAGCTTATGGA
GCAGCCGCCGGCTCGGCCGATCATCGAACGCATTCGTCGGAATATCCTTG
CTGAGAAGCCCAGAGTAACCCGGTTTGCCATCAAATGATCTGGAGTGGAA
GCTCACCTACGTCGGTTCGGCGACATCATGTCGGTCGTTTCTCTTCTTGG
CGTGAAAATCGTCAATAATCCTGCCTCTTTCCTCGACCCCTATCAATTTG
AGATCACTTTCGAATGTCTTGAACAGCTGCAGAAAGCCGGAGGCGCCAGC
AACAACAACCCGGCGGCCCATCAACAACAGCCCGAGTTGATGGTGCACTA
AGGACTCGGAGGAATCTGCCCCCGCTGAATACCCGCCAGATCAGCCCGAA
GCCGACCAGGAGGGAGATGACAGTGCCGCCTACGGTGCAGAGGAAGCAGA
GCTTGAAGCAGCCCTCTTCAAGGAGCTCAACGAGCTGGAGCCTAAGACCG
AAGATCAGGAGATGGAGGGAACCGAAGGCCCTGCCACCAAGGAAGAAGAG
GAGGAAGATATCTCGGATGCCGAGTCTGAGGACATCGAAGATGAGACTCC
GAGTATGACCAGGAACTCGACTCCCTGCTGGTGGGACCGATCCCCGTTGG
TGTCAACAAGTTCATCTTCGAGGCCGACCCCCCAGACCTCAAGCGCATCC
CTACTTCCGAAATCCTGGGAGTTACCGTGATTCTCCTCACTTGCAGCTAT
GACGGCAGAGAATTCGTTCGTGTCGGTTACTATGTAAACAACGAATACGA
TTCCGAGGAGCTTATGGAGCAGCCGCCGGCTCGGCCGATCATCGAACGCA
TTCGTCGGAATATCCTTGCTGAGAAGCCCAGAGTAACCCGGTTTGCCATC
AAATGATCTGGAGTGGAAGCTCACCTACGTCGGTTCGGCGACATCATGTC
GGTCGTTTCTCTTCTTGGCGTGAAAATCGTCAATAATCCTGCCTCTTTCC
TCGACCCCTATCAATTTGAGATCACTTTCGAATGTCTTGAACAGCTGCAG
AAAGCCGGAGGCGCCAGCAACAACAACCCGGCGGCCCATCAACAACAGCC
CGAGTTGATGGTGCACTAAGGACTCGGAGGAATCTGCCCCCGCTGAATAC
CCGCCAGATCAGCCCGAAGCCGACCAGGAGGGAGATGACAGTGCCGCCTA
CGGTGCAGAGGAAGCAGAGCTTGAAGCAGCCCTCTTCAAGGAGCTCAACG
AGCTGGAGCCTAAGACCGAAGATCAGGAGATGGAGGGAACCGAAGGCCCT
GCCACCAAGGAAGAAGAGGAGGAAGATATCTCGGATGCCGAGTCTGAGGA
CATCGAAGATGAGACTCCGAGTATGACCAGGAACTCGACTCCCTGCTGGT
GGGACCGATCCCCGTTGGTGTCAACAAGTTCATCTTCGAGGCCGACCCCC
CAGACCTCAAGCGCATCCCTACTTCCGAAATCCTGGGAGTTACCGTGATT
CTCCTCACTTGCAGCTATGACGGCAGAGAATTCGTTCGTGTCGGTTACTA
TGTAAACAACGAATACGATTCCGAGGAGCTTATGGAGCAGCCGCCGGCTC
GGCCGATCATCGAACGCATTCGTCGGAATATCCTTGCTGAGAAGCCCAGA
GTAACCCGGTTTGCCATCAAATGATCTGGAGTGGAAGCTCACCTACGTCG
GTTCGGCGACATCATGTCGGTCGTTTCTCTTCTTGGCGTGAAAATCGTCA
ATAATCCTGCCTCTTTCCTCGACCCCTATCAATTTGAGATCACTTTCGAA
TGTCTTGAACAGCTGCAGAAAGCCGGAGGCGCCAGCAACAACAACCCGGC
GGCCCATCAACAACAGCCCGAGTTGATGGTGCACTAAGGACTCGGAGGAA
TCTGCCCCCGCTGAATACCCGCCAGATCAGCCCGAAGCCGACCAGGAGGG
AGATGACAGTGCCGCCTACGGTGCAGAGGAAGCAGAGCTTGAAGCAGCCC
TCTTCAAGGAGCTCAACGAGCTGGAGCCTAAGACCGAAGATCAGGAGATG
GAGGGAACCGAAGGCCCTGCCACCAAGGAAGAAGAGGAGGAAGATATCTC
GGATGCCGAGTCTGAGGACATCGAAGATGAGACTCCGAGTATGACCAGGA
ACTCGACTCCCTGCTGGTGGGACCGATCCCCGTTGGTGTCAACAAGTTCA
TCTTCGAGGCCGACCCCCCAGACCTCAAGCGCATCCCTACTTCCGAAATC
CTGGGAGTTACCGTGATTCTCCTCACTTGCAGCTATGACGGCAGAGAATT
CGTTCGTGTCGGTTACTATGTAAACAACGAATACGATTCCGAGGAGCTTA
TGGAGCAGCCGCCGGCTCGGCCGATCATCGAACGCATTCGTCGGAATATC
CTTGCTGAGAAGCCCAGAGTAACCCGGTTTGCCATCAAATGATCTGGAGT
GGAAGCTCACCTACGTCGGTTCGGCGACATCATGTCGGTCGTTTCTCTTC
TTGGCGTGAAAATCGTCAATAATCCTGCCTCTTTCCTCGACCCCTATCAA
TTTGAGATCACTTTCGAATGTCTTGAACAGCTGCAGAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0042393histone binding
Vocabulary: Biological Process
TermDefinition
GO:0016573histone acetylation
GO:0006337nucleosome disassembly
GO:0006334nucleosome assembly
GO:0006333chromatin assembly or disassembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASF1CAN33_53305Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53305-T1CAN33_53305-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53305-T1.cdsCAN33_53305-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53305-T1.exon5CAN33_53305-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_53305-T1.exon4CAN33_53305-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_53305-T1.exon3CAN33_53305-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_53305-T1.exon2CAN33_53305-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_53305-T1.exon1CAN33_53305-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09264COX
DBxrefInterPro:IPR006818
DBxrefInterPro:IPR017282
DBxrefInterPro:IPR036747
DBxrefPFAM:PF04729
ProductHistone chaperone asf1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2067239..2068269 -
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