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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:2181827..2182488- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_53465-T1 ID=CAN33_53465-T1|Name=CAN33_53465-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=662bp|location=Sequence derived from alignment at NKJJ01000020.1:2181827..2182488- (Aspergillus niger FDAARGOS_311)
ATGGCCCAACTCAACTACCGCACAATCAACATCGATGTCCTGGACCCCGA
GTCCTCGATCAACTTCCCCATGGACACTCTCCTGCCGCCTACCCTCCCAG
CCCCGACGACCTCCGGCGCTGCGGCCTCCGTCGTTAACCAGGTGCGCCAG
CTCCTCCGCAGCGGCGACAACGAGGGAGCTCTGCGGTACGTGCTCGAGAC
GGCGCCGCTGGGCGGCGATGACCGCGCGAAGGAGGTGCATCTGGCAGCTG
TCGTGGAGGTCTTGCAGGGTATTCGTCAAGGGGAGATGAGTCGCGTGTTG
GAGGCTGTGTGTACCGGTGAGGGTGGGTCGGAGAGAGCGGATTGTTTGAT
GAAGTATTTGTATGGCTCCCTCTTCTTTGCTAGATGATGAGAAGTGGTTG
TTTTGGTGGTTGTGGATGTGCATGCTAATGACCTTTGTTGTATAGGTACA
AGGGCATGGCGGCGCCGACTCCTAGTAACGCGGCACAGTCGCCTCGCATG
TCGCCGCAGAGCACGGGATTTTCGCAGATTCAGGCCCGCAATCTGGGTGA
GGGAGGTGGCGGACAGCAGATGAGTGTGTTGTTGAACTGGCATGAGAAGT
TGGTGGAGGTTGCGGGGACGGGGTCCATTGTTAGGGTCATGACGGATCGG
AGGACTGTTTAA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:2181827..2182488- >CAN33_53465-T1 ID=CAN33_53465-T1|Name=CAN33_53465-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1152bp|location=Sequence derived from alignment at NKJJ01000020.1:2181827..2182488- (Aspergillus niger FDAARGOS_311)
GTACAAGGGCATGGCGGCGCCGACTCCTAGTAACGCGGCACAGTCGCCTC
GCATGTCGCCGCAGAGCACGGGATTTTCGCAGATTCAGGCCCGCAATCTG
GGTGAGGGAGGTGGCGGACAGCAGATGAGTGTGTTGTTGAACTGGCATGA
GAAGTTGGTGGAGGTTGCGGGGACGGGGTCCATTGTTAGGGTCATGACGG
ATCGGAGGACTGTTTAAATGGCCCAACTCAACTACCGCACAATCAACATC
GATGTCCTGGACCCCGAGTCCTCGATCAACTTCCCCATGGACACTCTCCT
GCCGCCTACCCTCCCAGCCCCGACGACCTCCGGCGCTGCGGCCTCCGTCG
TTAACCAGGTGCGCCAGCTCCTCCGCAGCGGCGACAACGAGGGAGCTCTG
CGGTACGTGCTCGAGACGGCGCCGCTGGGCGGCGATGACCGCGCGAAGGA
GGTGCATCTGGCAGCTGTCGTGGAGGTCTTGCAGGGTATTCGTCAAGGGG
AGATGAGTCGCGTGTTGGAGGCTGTGTGTACCGGTGAGGGTGGGTCGGAG
AGAGCGGATTGTTTGATGAAGTATTTGTACAAGGGCATGGCGGCGCCGAC
TCCTAGTAACGCGGCACAGTCGCCTCGCATGTCGCCGCAGAGCACGGGAT
TTTCGCAGATTCAGGCCCGCAATCTGGGTGAGGGAGGTGGCGGACAGCAG
ATGAGTGTGTTGTTGAACTGGCATGAGAAGTTGGTGGAGGTTGCGGGGAC
GGGGTCCATTGTTAGGGTCATGACGGATCGGAGGACTGTTTAAATGGCCC
AACTCAACTACCGCACAATCAACATCGATGTCCTGGACCCCGAGTCCTCG
ATCAACTTCCCCATGGACACTCTCCTGCCGCCTACCCTCCCAGCCCCGAC
GACCTCCGGCGCTGCGGCCTCCGTCGTTAACCAGGTGCGCCAGCTCCTCC
GCAGCGGCGACAACGAGGGAGCTCTGCGGTACGTGCTCGAGACGGCGCCG
CTGGGCGGCGATGACCGCGCGAAGGAGGTGCATCTGGCAGCTGTCGTGGA
GGTCTTGCAGGGTATTCGTCAAGGGGAGATGAGTCGCGTGTTGGAGGCTG
TGTGTACCGGTGAGGGTGGGTCGGAGAGAGCGGATTGTTTGATGAAGTAT
TT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0015629 | actin cytoskeleton |
| GO:0005885 | Arp2/3 protein complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0034314 | Arp2/3 complex-mediated actin nucleation |
| GO:0030833 | regulation of actin filament polymerization |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264V51 |
| DBxref | InterPro:IPR036743 |
| DBxref | InterPro:IPR006789 |
| DBxref | PFAM:PF04699 |
| Product | ARP2/3 complex 16 kDa subunit (p16-Arc) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:2181827..2182488 - |
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