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CAN33_53560-T1, CAN33_53560-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_53560-T1
Unique NameCAN33_53560-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2256318..2257074+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_53560-T1 ID=CAN33_53560-T1|Name=CAN33_53560-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=757bp|location=Sequence derived from alignment at NKJJ01000020.1:2256318..2257074+ (Aspergillus niger FDAARGOS_311)
ATGTCGCAGACTGTTGGAAAGGTATACTTTTCCCCCTTTCCTTTTCCTTC
AAACTTCCCCTTCTTCTCTTCTTATCCATCCATTGTTGCTTTCCTTCTGC
ATCTATTCAATGTCTAACTTGATATCAAAAATAATCCCATATAGACCCGT
CTCGCCTTCTCCCGAACATGGCACTACGTCGACGTCGGCAGCGACCCTCG
CAGTCTGGGTAGACTCGCCTCCTCTATTGCCCTCACCCTCATGGGCAAGA
ACAAGCCCATCTATGACCCCTCCACGGATTGTGGTGACTATGTCGTCGCC
GTCGGCTGCCACGACCTCCGCGTCACCGGCAAGAAGCGCTTCCAGAAGAA
GTACTACACTCACAACACCCGCCCCGGTAGTCTGCGGAGCATGACTATGG
ACATGATGTTTGAGAAATGGGGCGGTGGCGAGGTTCTCCGTCGTGCTGTT
CGCGGCATGTTGCCCAAGAATCGCTTGCGGGATAAGCGCTTGGCTAGGCT
GAAGAGTGAGTATACCTTCTCTTAAGTTATATTGATATCAATTGGATATA
TATTTGTTTGCCTCCTAGTTCTGGGGGAGGCTTGGGGCATATGTTATGTC
GTTTGAGAAGGGTGTATGCTAATAACATTGTTGTATAGCTTTCGAAGGTC
TCGCGCACCCCTACAAGGAGAACATCGTCAAGCTCAACGGACAGTCGGTC
ATTGGGAACTTGCCCGAGGTGAAGGAAGCGTTTAAGGCGGCTAAGACGGA
TGCGTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:2256318..2257074+

>CAN33_53560-T1 ID=CAN33_53560-T1|Name=CAN33_53560-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1503bp|location=Sequence derived from alignment at NKJJ01000020.1:2256318..2257074+ (Aspergillus niger FDAARGOS_311)
ATGTCGCAGACTGTTGGAAAGACCCGTCTCGCCTTCTCCCGAACATGGCA
CTACGTCGACGTCGGCAGCGACCCTCGCAGTCTGGGTAGACTCGCCTCCT
CTATTGCCCTCACCCTCATGGGCAAGAACAAGCCCATCTATGACCCCTCC
ACGGATTGTGGTGACTATGTCGTCGCCGTCGGCTGCCACGACCTCCGCGT
CACCGGCAAGAAGCGCTTCCAGAAGAAGTACTACACTCACAACACCCGCC
CCGGTAGTCTGCGGAGCATGACTATGGACATGATGTTTGAGAAATGGGGC
GGTGGCGAGGTTCTCCGTCGTGCTGTTCGCGGCATGTTGCCCAAGAATCG
CTTGCGGGATAAGCGCTTGGCTAGGCTGAAGACTTTCGAAGGTCTCGCGC
ACCCCTACAAGGAGAACATCGTCAAGCTCAACGGACAGTCGGTCATTGGG
AACTTGCCCGAGGTGAAGGAAGCGTTTAAGGCGGCTAAGACGGATGCGTA
AATGTCGCAGACTGTTGGAAAGACCCGTCTCGCCTTCTCCCGAACATGGC
ACTACGTCGACGTCGGCAGCGACCCTCGCAGTCTGGGTAGACTCGCCTCC
TCTATTGCCCTCACCCTCATGGGCAAGAACAAGCCCATCTATGACCCCTC
CACGGATTGTGGTGACTATGTCGTCGCCGTCGGCTGCCACGACCTCCGCG
TCACCGGCAAGAAGCGCTTCCAGAAGAAGTACTACACTCACAACACCCGC
CCCGGTAGTCTGCGGAGCATGACTATGGACATGATGTTTGAGAAATGGGG
CGGTGGCGAGGTTCTCCGTCGTGCTGTTCGCGGCATGTTGCCCAAGAATC
GCTTGCGGGATAAGCGCTTGGCTAGGCTGAAGACTTTCGAAGGTCTCGCG
CACCCCTACAAGGAGAACATCGTCAAGCTCAACGGACAGTCGGTCATTGG
GAACTTGCCCGAGGTGAAGGAAGCGTTTAAGGCGGCTAAGACGGATGCGT
AAATGTCGCAGACTGTTGGAAAGACCCGTCTCGCCTTCTCCCGAACATGG
CACTACGTCGACGTCGGCAGCGACCCTCGCAGTCTGGGTAGACTCGCCTC
CTCTATTGCCCTCACCCTCATGGGCAAGAACAAGCCCATCTATGACCCCT
CCACGGATTGTGGTGACTATGTCGTCGCCGTCGGCTGCCACGACCTCCGC
GTCACCGGCAAGAAGCGCTTCCAGAAGAAGTACTACACTCACAACACCCG
CCCCGGTAGTCTGCGGAGCATGACTATGGACATGATGTTTGAGAAATGGG
GCGGTGGCGAGGTTCTCCGTCGTGCTGTTCGCGGCATGTTGCCCAAGAAT
CGCTTGCGGGATAAGCGCTTGGCTAGGCTGAAGACTTTCGAAGGTCTCGC
GCACCCCTACAAGGAGAACATCGTCAAGCTCAACGGACAGTCGGTCATTG
GGAACTTGCCCGAGGTGAAGGAAGCGTTTAAGGCGGCTAAGACGGATGCG
TAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_53560CAN33_53560Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53560-T1.exon1CAN33_53560-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_53560-T1.exon2CAN33_53560-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_53560-T1.exon3CAN33_53560-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53560-T1.cdsCAN33_53560-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53560-T1CAN33_53560-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092654LJ
DBxrefInterPro:IPR005823
DBxrefInterPro:IPR036899
DBxrefInterPro:IPR005822
DBxrefPFAM:PF00572
ProductRibosomal protein L13 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2256318..2257074 +
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