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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:2522597..2524731- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_53950-T1 ID=CAN33_53950-T1|Name=CAN33_53950-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2135bp|location=Sequence derived from alignment at NKJJ01000020.1:2522597..2524731- (Aspergillus niger FDAARGOS_311)
ATGACGTCCGCTTCCTACCTCGCTGTCTCCGTCGAGGGACTCTCCATCCA
GTCGACCTCCGAGACCTCCAAGTTCCCCAACTGCTTCCCCTCCCTGAACC
CCGTCGACGTTTACAGAGAGCACATTGCGGAGGAGCTTGCCAAGATCACC
GGTCTGGACGCGGAGAAGATCTTCTCCCGTATCGCATGGACGAACTCGTT
GGACAAGGGTGACCTGGTGTTGCCGGTACGCGACCATCATAAAAACACAA
TTGGATTGGATTTTGTTGGGCCACATGACACCGACTAATGGAGCATGTTA
TCTCTAGGTCCCCTCTCTTCAGATCAAGAAGAACCCCCAGGAGCTGTGCA
AGGAACTCGTCGAGAAGTTCCCCGAGTCCGACCTCATCCTCCCCCCCGTT
GCCTTCGGTCCTCACATGCAGTTCTTCTTCCGGCCGGAACGTCTCACCAC
CAACGTCGTTAGCCGTATCTTGAAGGAGAAGTCTGCCTTTGGTACCAATG
GCAACGTTGGTCTGCGCGACCCCGCTGACCCCTCCAAGGGTCGCAAGCGG
ATCATCGTCGAGTTCTCGTCTCCCAACATCGCCAAGCCCTTCCATGCTGG
TCACCTGCGCAGTACCATCATCGGTGGTTTCCTTGCCAACCTCTACACGG
TCATGGGATGGGACGTCATCAAGATGAACTACCTTGGTGATTGGGGTAAG
CAGTACGGTCTGCTTGCCAATGGTTTCAAGATGTTCGGTAGCGAGGAGGA
GCTGACCAAGGACCCCATCAACCACCTGTTCAACGTCTACGTCAAGATCA
ACGGCATTGTCTCCGAGCAGGAGGGCCCCATCAAGGAGCTCAAGGAGCAG
ATCAAGGCCAAGAAGGAGAAGGGCGAGGACGCCGCCGAGCAAGAGAAGGA
GCTTGCCAAGCTTGTTGATGCCAGTGAGGACGAGAACGCCCGCCGTTACT
TCAAGAGCATGGAGGATGGTAACCAGGAGGCTCTTGCTCTCTGGCGCCGG
TTCCGTGAGCTCAGTATCGAGAAGTACAGACAGACCTATGCTCGTTTGAA
CATTGACTTTGACGTCTACTCTGGAGAGTCTCAGATCAAGCAGGAGAGCA
TGACCTCCGCTTACGAGACCATGGAGAAGGTCGGCGTGTCCGAGAAGTCC
GAAGGTGCTGTCATCGTCGACTTCACCAAGCACGGCGCCAAGAAGCTTGG
AAAGGCCATCATTGTCCGCAAGGACGGCACTCCTCTCTACCTGACCCGTG
ATATTGGTGCCATCCTCGAGCGTGAGGAGGCCTACAAGTTTGACAAGATG
ATCTACGTCGTTGCCGCTCAGCAGGACCTCCACTTGGCTCAGCTGTTCAA
GATCACTGAACTCATGGGCTACAAGGATCTGGCCAGCCGCTGCCAGCACA
TCAACTTCGGTATGGTGCGCGGTATGAGCACCCGTAAGGGTACTGTCAAG
TTCTTGGACGACATCCTCCAGGATGTCCGTGACAAGATGCACGAAGTCAT
GAAGAAGAACACCGAGAAGTACGAGCAGGTCGCCGACCCTGAGGGCACTG
CTGACATCCTGGGTATGTCCTCCGTCATGGTTCAGGACATGACCGGAAAG
CGGTACGTACATCCCTTTGCCCCATGATAGCCTCTCAATTTGCTAACGAA
ACACAGTATCAACGGCTATGACTTCAACCTGGATGCCATGACCTCTTTCG
AGGGTGACACCGGTCCTTACCTGCAATACGCTCACGCCCGTCTCTGCTCC
ATTGTGCGCAAGTCCGGCCTGAACGTCGACGAGCTCGACACGGCCAACCT
GAGCCTCCTGACCGAGACCCACGCTACCGACCTTGCTCGTCTGCTCGCCC
AGTGGCCCGATGTGCTGCTCAACACGACCCGCACCCTGGAGCCCACTACT
ATCCTCACCTACCTGTTCCGCATGACCCACGTGCTTAGCTCCAGCTACGA
TGTGCTCAAGGTTGTTGGTAGCGAGCCTGAGCTCAAGAAGGCCCGTATGG
CTCTGTACGAGTCCGCCCGCCAGGTGCTGCACAACGGTATGCGCATCCTG
GGTCTCAGCCCTGTCAACCGGTACGTTTAGCCCCGATTCCCACGCCTAAT
ATGCACAATACTAATGAATCATCTATAGTATGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:2522597..2524731- >CAN33_53950-T1 ID=CAN33_53950-T1|Name=CAN33_53950-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7764bp|location=Sequence derived from alignment at NKJJ01000020.1:2522597..2524731- (Aspergillus niger FDAARGOS_311)
TATGTAATATCAACGGCTATGACTTCAACCTGGATGCCATGACCTCTTTC
GAGGGTGACACCGGTCCTTACCTGCAATACGCTCACGCCCGTCTCTGCTC
CATTGTGCGCAAGTCCGGCCTGAACGTCGACGAGCTCGACACGGCCAACC
TGAGCCTCCTGACCGAGACCCACGCTACCGACCTTGCTCGTCTGCTCGCC
CAGTGGCCCGATGTGCTGCTCAACACGACCCGCACCCTGGAGCCCACTAC
TATCCTCACCTACCTGTTCCGCATGACCCACGTGCTTAGCTCCAGCTACG
ATGTGCTCAAGGTTGTTGGTAGCGAGCCTGAGCTCAAGAAGGCCCGTATG
GCTCTGTACGAGTCCGCCCGCCAGGTGCTGCACAACGGTATGCGCATCCT
GGGTCTCAGCCCTGTCAACCGGTCCCCTCTCTTCAGATCAAGAAGAACCC
CCAGGAGCTGTGCAAGGAACTCGTCGAGAAGTTCCCCGAGTCCGACCTCA
TCCTCCCCCCCGTTGCCTTCGGTCCTCACATGCAGTTCTTCTTCCGGCCG
GAACGTCTCACCACCAACGTCGTTAGCCGTATCTTGAAGGAGAAGTCTGC
CTTTGGTACCAATGGCAACGTTGGTCTGCGCGACCCCGCTGACCCCTCCA
AGGGTCGCAAGCGGATCATCGTCGAGTTCTCGTCTCCCAACATCGCCAAG
CCCTTCCATGCTGGTCACCTGCGCAGTACCATCATCGGTGGTTTCCTTGC
CAACCTCTACACGGTCATGGGATGGGACGTCATCAAGATGAACTACCTTG
GTGATTGGGGTAAGCAGTACGGTCTGCTTGCCAATGGTTTCAAGATGTTC
GGTAGCGAGGAGGAGCTGACCAAGGACCCCATCAACCACCTGTTCAACGT
CTACGTCAAGATCAACGGCATTGTCTCCGAGCAGGAGGGCCCCATCAAGG
AGCTCAAGGAGCAGATCAAGGCCAAGAAGGAGAAGGGCGAGGACGCCGCC
GAGCAAGAGAAGGAGCTTGCCAAGCTTGTTGATGCCAGTGAGGACGAGAA
CGCCCGCCGTTACTTCAAGAGCATGGAGGATGGTAACCAGGAGGCTCTTG
CTCTCTGGCGCCGGTTCCGTGAGCTCAGTATCGAGAAGTACAGACAGACC
TATGCTCGTTTGAACATTGACTTTGACGTCTACTCTGGAGAGTCTCAGAT
CAAGCAGGAGAGCATGACCTCCGCTTACGAGACCATGGAGAAGGTCGGCG
TGTCCGAGAAGTCCGAAGGTGCTGTCATCGTCGACTTCACCAAGCACGGC
GCCAAGAAGCTTGGAAAGGCCATCATTGTCCGCAAGGACGGCACTCCTCT
CTACCTGACCCGTGATATTGGTGCCATCCTCGAGCGTGAGGAGGCCTACA
AGTTTGACAAGATGATCTACGTCGTTGCCGCTCAGCAGGACCTCCACTTG
GCTCAGCTGTTCAAGATCACTGAACTCATGGGCTACAAGGATCTGGCCAG
CCGCTGCCAGCACATCAACTTCGGTATGGTGCGCGGTATGAGCACCCGTA
AGGGTACTGTCAAGTTCTTGGACGACATCCTCCAGGATGTCCGTGACAAG
ATGCACGAAGTCATGAAGAAGAACACCGAGAAGTACGAGCAGGTCGCCGA
CCCTGAGGGCACTGCTGACATCCTGGGTATGTCCTCCGTCATGGTTCAGG
ACATGACCGGAAAGCGATGACGTCCGCTTCCTACCTCGCTGTCTCCGTCG
AGGGACTCTCCATCCAGTCGACCTCCGAGACCTCCAAGTTCCCCAACTGC
TTCCCCTCCCTGAACCCCGTCGACGTTTACAGAGAGCACATTGCGGAGGA
GCTTGCCAAGATCACCGGTCTGGACGCGGAGAAGATCTTCTCCCGTATCG
CATGGACGAACTCGTTGGACAAGGGTGACCTGGTGTTGCCGTATGTAATA
TCAACGGCTATGACTTCAACCTGGATGCCATGACCTCTTTCGAGGGTGAC
ACCGGTCCTTACCTGCAATACGCTCACGCCCGTCTCTGCTCCATTGTGCG
CAAGTCCGGCCTGAACGTCGACGAGCTCGACACGGCCAACCTGAGCCTCC
TGACCGAGACCCACGCTACCGACCTTGCTCGTCTGCTCGCCCAGTGGCCC
GATGTGCTGCTCAACACGACCCGCACCCTGGAGCCCACTACTATCCTCAC
CTACCTGTTCCGCATGACCCACGTGCTTAGCTCCAGCTACGATGTGCTCA
AGGTTGTTGGTAGCGAGCCTGAGCTCAAGAAGGCCCGTATGGCTCTGTAC
GAGTCCGCCCGCCAGGTGCTGCACAACGGTATGCGCATCCTGGGTCTCAG
CCCTGTCAACCGGTCCCCTCTCTTCAGATCAAGAAGAACCCCCAGGAGCT
GTGCAAGGAACTCGTCGAGAAGTTCCCCGAGTCCGACCTCATCCTCCCCC
CCGTTGCCTTCGGTCCTCACATGCAGTTCTTCTTCCGGCCGGAACGTCTC
ACCACCAACGTCGTTAGCCGTATCTTGAAGGAGAAGTCTGCCTTTGGTAC
CAATGGCAACGTTGGTCTGCGCGACCCCGCTGACCCCTCCAAGGGTCGCA
AGCGGATCATCGTCGAGTTCTCGTCTCCCAACATCGCCAAGCCCTTCCAT
GCTGGTCACCTGCGCAGTACCATCATCGGTGGTTTCCTTGCCAACCTCTA
CACGGTCATGGGATGGGACGTCATCAAGATGAACTACCTTGGTGATTGGG
GTAAGCAGTACGGTCTGCTTGCCAATGGTTTCAAGATGTTCGGTAGCGAG
GAGGAGCTGACCAAGGACCCCATCAACCACCTGTTCAACGTCTACGTCAA
GATCAACGGCATTGTCTCCGAGCAGGAGGGCCCCATCAAGGAGCTCAAGG
AGCAGATCAAGGCCAAGAAGGAGAAGGGCGAGGACGCCGCCGAGCAAGAG
AAGGAGCTTGCCAAGCTTGTTGATGCCAGTGAGGACGAGAACGCCCGCCG
TTACTTCAAGAGCATGGAGGATGGTAACCAGGAGGCTCTTGCTCTCTGGC
GCCGGTTCCGTGAGCTCAGTATCGAGAAGTACAGACAGACCTATGCTCGT
TTGAACATTGACTTTGACGTCTACTCTGGAGAGTCTCAGATCAAGCAGGA
GAGCATGACCTCCGCTTACGAGACCATGGAGAAGGTCGGCGTGTCCGAGA
AGTCCGAAGGTGCTGTCATCGTCGACTTCACCAAGCACGGCGCCAAGAAG
CTTGGAAAGGCCATCATTGTCCGCAAGGACGGCACTCCTCTCTACCTGAC
CCGTGATATTGGTGCCATCCTCGAGCGTGAGGAGGCCTACAAGTTTGACA
AGATGATCTACGTCGTTGCCGCTCAGCAGGACCTCCACTTGGCTCAGCTG
TTCAAGATCACTGAACTCATGGGCTACAAGGATCTGGCCAGCCGCTGCCA
GCACATCAACTTCGGTATGGTGCGCGGTATGAGCACCCGTAAGGGTACTG
TCAAGTTCTTGGACGACATCCTCCAGGATGTCCGTGACAAGATGCACGAA
GTCATGAAGAAGAACACCGAGAAGTACGAGCAGGTCGCCGACCCTGAGGG
CACTGCTGACATCCTGGGTATGTCCTCCGTCATGGTTCAGGACATGACCG
GAAAGCGATGACGTCCGCTTCCTACCTCGCTGTCTCCGTCGAGGGACTCT
CCATCCAGTCGACCTCCGAGACCTCCAAGTTCCCCAACTGCTTCCCCTCC
CTGAACCCCGTCGACGTTTACAGAGAGCACATTGCGGAGGAGCTTGCCAA
GATCACCGGTCTGGACGCGGAGAAGATCTTCTCCCGTATCGCATGGACGA
ACTCGTTGGACAAGGGTGACCTGGTGTTGCCGTATGTAATATCAACGGCT
ATGACTTCAACCTGGATGCCATGACCTCTTTCGAGGGTGACACCGGTCCT
TACCTGCAATACGCTCACGCCCGTCTCTGCTCCATTGTGCGCAAGTCCGG
CCTGAACGTCGACGAGCTCGACACGGCCAACCTGAGCCTCCTGACCGAGA
CCCACGCTACCGACCTTGCTCGTCTGCTCGCCCAGTGGCCCGATGTGCTG
CTCAACACGACCCGCACCCTGGAGCCCACTACTATCCTCACCTACCTGTT
CCGCATGACCCACGTGCTTAGCTCCAGCTACGATGTGCTCAAGGTTGTTG
GTAGCGAGCCTGAGCTCAAGAAGGCCCGTATGGCTCTGTACGAGTCCGCC
CGCCAGGTGCTGCACAACGGTATGCGCATCCTGGGTCTCAGCCCTGTCAA
CCGGTCCCCTCTCTTCAGATCAAGAAGAACCCCCAGGAGCTGTGCAAGGA
ACTCGTCGAGAAGTTCCCCGAGTCCGACCTCATCCTCCCCCCCGTTGCCT
TCGGTCCTCACATGCAGTTCTTCTTCCGGCCGGAACGTCTCACCACCAAC
GTCGTTAGCCGTATCTTGAAGGAGAAGTCTGCCTTTGGTACCAATGGCAA
CGTTGGTCTGCGCGACCCCGCTGACCCCTCCAAGGGTCGCAAGCGGATCA
TCGTCGAGTTCTCGTCTCCCAACATCGCCAAGCCCTTCCATGCTGGTCAC
CTGCGCAGTACCATCATCGGTGGTTTCCTTGCCAACCTCTACACGGTCAT
GGGATGGGACGTCATCAAGATGAACTACCTTGGTGATTGGGGTAAGCAGT
ACGGTCTGCTTGCCAATGGTTTCAAGATGTTCGGTAGCGAGGAGGAGCTG
ACCAAGGACCCCATCAACCACCTGTTCAACGTCTACGTCAAGATCAACGG
CATTGTCTCCGAGCAGGAGGGCCCCATCAAGGAGCTCAAGGAGCAGATCA
AGGCCAAGAAGGAGAAGGGCGAGGACGCCGCCGAGCAAGAGAAGGAGCTT
GCCAAGCTTGTTGATGCCAGTGAGGACGAGAACGCCCGCCGTTACTTCAA
GAGCATGGAGGATGGTAACCAGGAGGCTCTTGCTCTCTGGCGCCGGTTCC
GTGAGCTCAGTATCGAGAAGTACAGACAGACCTATGCTCGTTTGAACATT
GACTTTGACGTCTACTCTGGAGAGTCTCAGATCAAGCAGGAGAGCATGAC
CTCCGCTTACGAGACCATGGAGAAGGTCGGCGTGTCCGAGAAGTCCGAAG
GTGCTGTCATCGTCGACTTCACCAAGCACGGCGCCAAGAAGCTTGGAAAG
GCCATCATTGTCCGCAAGGACGGCACTCCTCTCTACCTGACCCGTGATAT
TGGTGCCATCCTCGAGCGTGAGGAGGCCTACAAGTTTGACAAGATGATCT
ACGTCGTTGCCGCTCAGCAGGACCTCCACTTGGCTCAGCTGTTCAAGATC
ACTGAACTCATGGGCTACAAGGATCTGGCCAGCCGCTGCCAGCACATCAA
CTTCGGTATGGTGCGCGGTATGAGCACCCGTAAGGGTACTGTCAAGTTCT
TGGACGACATCCTCCAGGATGTCCGTGACAAGATGCACGAAGTCATGAAG
AAGAACACCGAGAAGTACGAGCAGGTCGCCGACCCTGAGGGCACTGCTGA
CATCCTGGGTATGTCCTCCGTCATGGTTCAGGACATGACCGGAAAGCGAT
GACGTCCGCTTCCTACCTCGCTGTCTCCGTCGAGGGACTCTCCATCCAGT
CGACCTCCGAGACCTCCAAGTTCCCCAACTGCTTCCCCTCCCTGAACCCC
GTCGACGTTTACAGAGAGCACATTGCGGAGGAGCTTGCCAAGATCACCGG
TCTGGACGCGGAGAAGATCTTCTCCCGTATCGCATGGACGAACTCGTTGG
ACAAGGGTGACCTGGTGTTGCCGTATGTAATATCAACGGCTATGACTTCA
ACCTGGATGCCATGACCTCTTTCGAGGGTGACACCGGTCCTTACCTGCAA
TACGCTCACGCCCGTCTCTGCTCCATTGTGCGCAAGTCCGGCCTGAACGT
CGACGAGCTCGACACGGCCAACCTGAGCCTCCTGACCGAGACCCACGCTA
CCGACCTTGCTCGTCTGCTCGCCCAGTGGCCCGATGTGCTGCTCAACACG
ACCCGCACCCTGGAGCCCACTACTATCCTCACCTACCTGTTCCGCATGAC
CCACGTGCTTAGCTCCAGCTACGATGTGCTCAAGGTTGTTGGTAGCGAGC
CTGAGCTCAAGAAGGCCCGTATGGCTCTGTACGAGTCCGCCCGCCAGGTG
CTGCACAACGGTATGCGCATCCTGGGTCTCAGCCCTGTCAACCGGTCCCC
TCTCTTCAGATCAAGAAGAACCCCCAGGAGCTGTGCAAGGAACTCGTCGA
GAAGTTCCCCGAGTCCGACCTCATCCTCCCCCCCGTTGCCTTCGGTCCTC
ACATGCAGTTCTTCTTCCGGCCGGAACGTCTCACCACCAACGTCGTTAGC
CGTATCTTGAAGGAGAAGTCTGCCTTTGGTACCAATGGCAACGTTGGTCT
GCGCGACCCCGCTGACCCCTCCAAGGGTCGCAAGCGGATCATCGTCGAGT
TCTCGTCTCCCAACATCGCCAAGCCCTTCCATGCTGGTCACCTGCGCAGT
ACCATCATCGGTGGTTTCCTTGCCAACCTCTACACGGTCATGGGATGGGA
CGTCATCAAGATGAACTACCTTGGTGATTGGGGTAAGCAGTACGGTCTGC
TTGCCAATGGTTTCAAGATGTTCGGTAGCGAGGAGGAGCTGACCAAGGAC
CCCATCAACCACCTGTTCAACGTCTACGTCAAGATCAACGGCATTGTCTC
CGAGCAGGAGGGCCCCATCAAGGAGCTCAAGGAGCAGATCAAGGCCAAGA
AGGAGAAGGGCGAGGACGCCGCCGAGCAAGAGAAGGAGCTTGCCAAGCTT
GTTGATGCCAGTGAGGACGAGAACGCCCGCCGTTACTTCAAGAGCATGGA
GGATGGTAACCAGGAGGCTCTTGCTCTCTGGCGCCGGTTCCGTGAGCTCA
GTATCGAGAAGTACAGACAGACCTATGCTCGTTTGAACATTGACTTTGAC
GTCTACTCTGGAGAGTCTCAGATCAAGCAGGAGAGCATGACCTCCGCTTA
CGAGACCATGGAGAAGGTCGGCGTGTCCGAGAAGTCCGAAGGTGCTGTCA
TCGTCGACTTCACCAAGCACGGCGCCAAGAAGCTTGGAAAGGCCATCATT
GTCCGCAAGGACGGCACTCCTCTCTACCTGACCCGTGATATTGGTGCCAT
CCTCGAGCGTGAGGAGGCCTACAAGTTTGACAAGATGATCTACGTCGTTG
CCGCTCAGCAGGACCTCCACTTGGCTCAGCTGTTCAAGATCACTGAACTC
ATGGGCTACAAGGATCTGGCCAGCCGCTGCCAGCACATCAACTTCGGTAT
GGTGCGCGGTATGAGCACCCGTAAGGGTACTGTCAAGTTCTTGGACGACA
TCCTCCAGGATGTCCGTGACAAGATGCACGAAGTCATGAAGAAGAACACC
GAGAAGTACGAGCAGGTCGCCGACCCTGAGGGCACTGCTGACATCCTGGG
TATGTCCTCCGTCATGGTTCAGGACATGACCGGAAAGCGATGACGTCCGC
TTCCTACCTCGCTGTCTCCGTCGAGGGACTCTCCATCCAGTCGACCTCCG
AGACCTCCAAGTTCCCCAACTGCTTCCCCTCCCTGAACCCCGTCGACGTT
TACAGAGAGCACATTGCGGAGGAGCTTGCCAAGATCACCGGTCTGGACGC
GGAGAAGATCTTCTCCCGTATCGCATGGACGAACTCGTTGGACAAGGGTG
ACCTGGTGTTGCCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004812 | aminoacyl-tRNA ligase activity |
| GO:0000166 | nucleotide binding |
| GO:0005524 | ATP binding |
| GO:0004814 | arginine-tRNA ligase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006418 | tRNA aminoacylation for protein translation |
| GO:0006420 | arginyl-tRNA aminoacylation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009080 |
| DBxref | InterPro:IPR001412 |
| DBxref | InterPro:IPR036695 |
| DBxref | InterPro:IPR035684 |
| DBxref | InterPro:IPR014729 |
| DBxref | InterPro:IPR008909 |
| DBxref | InterPro:IPR005148 |
| DBxref | InterPro:IPR001278 |
| DBxref | PFAM:PF00750 |
| DBxref | PFAM:PF05746 |
| DBxref | PFAM:PF03485 |
| Product | arginine--tRNA ligase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:2522597..2524731 - |
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