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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:2598674..2601247- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_54090-T1 ID=CAN33_54090-T1|Name=CAN33_54090-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2574bp|location=Sequence derived from alignment at NKJJ01000020.1:2598674..2601247- (Aspergillus niger FDAARGOS_311)
ATGCCCTCAGACATCCAGGTTTTCGTGAAATGGAAGGATCAAACGATATT
CGCCGGGGAAGATGTGGAATGTATCATTACCTTCAAGAACGTTGCGGAGA
CGAACGGAGACCCCCGGAACGGGGGGCAGTCCTCGCATCAGAGACATCCA
TCGCGAGCTACCAGCTCACATTCAGAGTCACTGTTTTCGCTCCGATCACC
TCAGAAATTCTTCTTCAGTCCACATCGCCGCTCATACTCTAGCGTATCCA
AAAAGAGCCCGTCGCATCGCCCCTCTTCATCAGTGAGCTCACCGTTGATC
GGTTCTCACAGCTTTCCGCCCCCGTCCACCCCTCGCAGTGGTCCACCAGC
TGGTGGAAAGCACAAGCGCTCAGTATCTATTCTTTCTATCGATAGCGAAA
CAACAGGAGAGCCGACTCCCAGAACATCTTCACAATTCAGTCGATCGAGG
CCGGTCAGGGGTCATGGGCGCGCTGCGAGTCTACAAGTTCTTCCGCGAAG
GAATGAGTTCTACGAAGAATCATTTGCAAAAGGTACCTCCAATAGATAGC
GCGATCGGGGATGGTTCGATCATTAGGCTGACTACAGTCAATTGCTAGCA
GGACGCAACACGTATCGTGCCTTTCCACCCCCAGAGTCCCCGGTCAATTC
GTCTCCTGCAAACCCACGAATAGACATCGATGATGTAGGAGGGCCTACTT
CTCAGCCCCCATTCGAGTCACCTCGTACACCTGCGCGTCGGCCTCAATTG
CCACCTCTCGAGTTCAAATTTCCGCCTTCACCGGGGGCTGATACACACTC
GCGTTCTACTCTATCTCCCCTCGCAACACCCTTCGAAGAGACTGCCGGAC
AGACAAAGCCCAATGGAAGGGAGTCAGCAACACTAGCTGCCCCAGGCCAT
CTGCCTCAGCTCACCAGAATCATGTCAACCTCCAGTCTCACTGGTAGTCA
TAGAAGCAGCAATGAGTATAACTCTGTTAGCGACAATTCTACAGAAACTC
TGCAATCCGAGTACACGAACTACTCGACGGCGATGCCGCGTCAGAATATC
CCTCGCCACGCGCGACACATGTCGAGTATTGAGTCTCCGGGCATAGCGCC
CAAGAGCCAGACTCTACTCATGGGATATGCCCAGATCAGTGCATCTTTCA
CTGTTGACGGTTCGTTGATCCATCAGTCACATTTTGAGGAAGTGAAGCGA
AAAGGTGTTGTTGGTGGTGCAGGGTCTGCGTCGGGTATGAACAGCGGGAG
ACCAGCTATGCATAACGATAAGAATCGCAAGGGCGGCGGTTTCTGGGGCG
CGTTCAAATGGAACGCGATCGAAGAGTCTCTGAGCGGTTTGCTCTCCAAT
AATGAGTTGGATGGCTTGCGAGATATGCGAGGAGTTTCTTCTTCGAAATC
CATACCGTTGCTGTCTACTACCCAGTCCCTTCTCTTCGTGGACCTACGAC
TGGCACCGGGAGAAGAGCAGTCTTACTCCTTTACATTTACCCTGCCATCG
GGACTTCCAGCCAGTCATAAGGGGAAAGCCATTAAGATATCTTACAATCT
CGTCATTGGTACACAGCGGCCGAGTGGCCATCATGAACCCCAACGAGTCA
ATCGTATCAGTATACCTTTCCGCGTTTTCAGCGGCGTCAATGGTGAGCTC
GTCGTTGTTTCCCTGCGCAGCAAAGTGTCACTAATTCCTTCTATAGGTCA
TGGGGAGATAATGGGTCATGACCTGATGAACCCGTATGTGCTCCTTCGCG
ACGAGGCGCGAGTGCAGAAGGTTGGCCCAAACCCGCCGCCGGCAGTCAAG
CCCAAAAGCATCAGTGGGCCGACTTGGACATCAGCCCCAGACTTCTTGTC
GTATGTGGATGACATCCTGGAGCAGAGTGCACGCCAAAACTCGCTGCAAC
CACCCGAGGCGACGCCCGAGAAGCGCGCAAGTCGCGACACATCTACCGGG
CACCTTACTTGCAAAGACGCTATTGATCTTGCCATTCTCCGAAGCAACCA
GGCGCTCGGTTCCTCGCGCAGTCCTAACCGGTTTGAGATTGCCCGAGACG
GGCGCCGAATTGCTGTTGTGGTACTCAACCGTCCCGCGCACAGGCTGGGC
GAAACCATCATCGCCACCGTCAACTTTGCAGACGCGGCACTTCCCTGCTA
CGCCCTGCGGGCGACATTAGAAAGTTCAGAGAGGGTTGCAGGGCATCTAG
CAGTACGATCAAACGCCAGTATTCGTCGTGCGACTCGAAAGATCCATGCC
TCCTATTTCGAAAACACCCTGTATGCAACGCGCGTTATTTTCAGTCCGGC
TGTTCCGGTATCGGCGACGCCGACCGTCATAACAACTGGGGTCAATCATG
AGTGGGAACTTCGGTTCGAGTTTGTTACTAGCAGTGTTCACGATGGTTCA
GCCCCTTCGGGAGCTCGCTTGCTCGAAACCGTATCGGAAGACGATCGCGG
GCGCATCATGTCCGCGTTGGAGAACTTGGGCTGCGAATCGTTCGAAATTG
CCATCCCTATCACGATTTACGGAGAGACAGTCCGGGAGCGATTGCCAGAG
GAGAATGAAGGATACTCTATATGA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:2598674..2601247- >CAN33_54090-T1 ID=CAN33_54090-T1|Name=CAN33_54090-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7362bp|location=Sequence derived from alignment at NKJJ01000020.1:2598674..2601247- (Aspergillus niger FDAARGOS_311)
GTCATGGGGAGATAATGGGTCATGACCTGATGAACCCGTATGTGCTCCTT
CGCGACGAGGCGCGAGTGCAGAAGGTTGGCCCAAACCCGCCGCCGGCAGT
CAAGCCCAAAAGCATCAGTGGGCCGACTTGGACATCAGCCCCAGACTTCT
TGTCGTATGTGGATGACATCCTGGAGCAGAGTGCACGCCAAAACTCGCTG
CAACCACCCGAGGCGACGCCCGAGAAGCGCGCAAGTCGCGACACATCTAC
CGGGCACCTTACTTGCAAAGACGCTATTGATCTTGCCATTCTCCGAAGCA
ACCAGGCGCTCGGTTCCTCGCGCAGTCCTAACCGGTTTGAGATTGCCCGA
GACGGGCGCCGAATTGCTGTTGTGGTACTCAACCGTCCCGCGCACAGGCT
GGGCGAAACCATCATCGCCACCGTCAACTTTGCAGACGCGGCACTTCCCT
GCTACGCCCTGCGGGCGACATTAGAAAGTTCAGAGAGGGTTGCAGGGCAT
CTAGCAGTACGATCAAACGCCAGTATTCGTCGTGCGACTCGAAAGATCCA
TGCCTCCTATTTCGAAAACACCCTGTATGCAACGCGCGTTATTTTCAGTC
CGGCTGTTCCGGTATCGGCGACGCCGACCGTCATAACAACTGGGGTCAAT
CATGAGTGGGAACTTCGGTTCGAGTTTGTTACTAGCAGTGTTCACGATGG
TTCAGCCCCTTCGGGAGCTCGCTTGCTCGAAACCGTATCGGAAGACGATC
GCGGGCGCATCATGTCCGCGTTGGAGAACTTGGGCTGCGAATCGTTCGAA
ATTGCCATCCCTATCACGATTTACGGAGAGACAGTCCGGGAGCGATTGCC
AGAGGAGAATGAAGGATACTCTATATGACAGGACGCAACACGTATCGTGC
CTTTCCACCCCCAGAGTCCCCGGTCAATTCGTCTCCTGCAAACCCACGAA
TAGACATCGATGATGTAGGAGGGCCTACTTCTCAGCCCCCATTCGAGTCA
CCTCGTACACCTGCGCGTCGGCCTCAATTGCCACCTCTCGAGTTCAAATT
TCCGCCTTCACCGGGGGCTGATACACACTCGCGTTCTACTCTATCTCCCC
TCGCAACACCCTTCGAAGAGACTGCCGGACAGACAAAGCCCAATGGAAGG
GAGTCAGCAACACTAGCTGCCCCAGGCCATCTGCCTCAGCTCACCAGAAT
CATGTCAACCTCCAGTCTCACTGGTAGTCATAGAAGCAGCAATGAGTATA
ACTCTGTTAGCGACAATTCTACAGAAACTCTGCAATCCGAGTACACGAAC
TACTCGACGGCGATGCCGCGTCAGAATATCCCTCGCCACGCGCGACACAT
GTCGAGTATTGAGTCTCCGGGCATAGCGCCCAAGAGCCAGACTCTACTCA
TGGGATATGCCCAGATCAGTGCATCTTTCACTGTTGACGGTTCGTTGATC
CATCAGTCACATTTTGAGGAAGTGAAGCGAAAAGGTGTTGTTGGTGGTGC
AGGGTCTGCGTCGGGTATGAACAGCGGGAGACCAGCTATGCATAACGATA
AGAATCGCAAGGGCGGCGGTTTCTGGGGCGCGTTCAAATGGAACGCGATC
GAAGAGTCTCTGAGCGGTTTGCTCTCCAATAATGAGTTGGATGGCTTGCG
AGATATGCGAGGAGTTTCTTCTTCGAAATCCATACCGTTGCTGTCTACTA
CCCAGTCCCTTCTCTTCGTGGACCTACGACTGGCACCGGGAGAAGAGCAG
TCTTACTCCTTTACATTTACCCTGCCATCGGGACTTCCAGCCAGTCATAA
GGGGAAAGCCATTAAGATATCTTACAATCTCGTCATTGGTACACAGCGGC
CGAGTGGCCATCATGAACCCCAACGAGTCAATCGTATCAGTATACCTTTC
CGCGTTTTCAGCGGCGTCAATGATGCCCTCAGACATCCAGGTTTTCGTGA
AATGGAAGGATCAAACGATATTCGCCGGGGAAGATGTGGAATGTATCATT
ACCTTCAAGAACGTTGCGGAGACGAACGGAGACCCCCGGAACGGGGGGCA
GTCCTCGCATCAGAGACATCCATCGCGAGCTACCAGCTCACATTCAGAGT
CACTGTTTTCGCTCCGATCACCTCAGAAATTCTTCTTCAGTCCACATCGC
CGCTCATACTCTAGCGTATCCAAAAAGAGCCCGTCGCATCGCCCCTCTTC
ATCAGTGAGCTCACCGTTGATCGGTTCTCACAGCTTTCCGCCCCCGTCCA
CCCCTCGCAGTGGTCCACCAGCTGGTGGAAAGCACAAGCGCTCAGTATCT
ATTCTTTCTATCGATAGCGAAACAACAGGAGAGCCGACTCCCAGAACATC
TTCACAATTCAGTCGATCGAGGCCGGTCAGGGGTCATGGGCGCGCTGCGA
GTCTACAAGTTCTTCCGCGAAGGAATGAGTTCTACGAAGAATCATTTGCA
AAAGGTCATGGGGAGATAATGGGTCATGACCTGATGAACCCGTATGTGCT
CCTTCGCGACGAGGCGCGAGTGCAGAAGGTTGGCCCAAACCCGCCGCCGG
CAGTCAAGCCCAAAAGCATCAGTGGGCCGACTTGGACATCAGCCCCAGAC
TTCTTGTCGTATGTGGATGACATCCTGGAGCAGAGTGCACGCCAAAACTC
GCTGCAACCACCCGAGGCGACGCCCGAGAAGCGCGCAAGTCGCGACACAT
CTACCGGGCACCTTACTTGCAAAGACGCTATTGATCTTGCCATTCTCCGA
AGCAACCAGGCGCTCGGTTCCTCGCGCAGTCCTAACCGGTTTGAGATTGC
CCGAGACGGGCGCCGAATTGCTGTTGTGGTACTCAACCGTCCCGCGCACA
GGCTGGGCGAAACCATCATCGCCACCGTCAACTTTGCAGACGCGGCACTT
CCCTGCTACGCCCTGCGGGCGACATTAGAAAGTTCAGAGAGGGTTGCAGG
GCATCTAGCAGTACGATCAAACGCCAGTATTCGTCGTGCGACTCGAAAGA
TCCATGCCTCCTATTTCGAAAACACCCTGTATGCAACGCGCGTTATTTTC
AGTCCGGCTGTTCCGGTATCGGCGACGCCGACCGTCATAACAACTGGGGT
CAATCATGAGTGGGAACTTCGGTTCGAGTTTGTTACTAGCAGTGTTCACG
ATGGTTCAGCCCCTTCGGGAGCTCGCTTGCTCGAAACCGTATCGGAAGAC
GATCGCGGGCGCATCATGTCCGCGTTGGAGAACTTGGGCTGCGAATCGTT
CGAAATTGCCATCCCTATCACGATTTACGGAGAGACAGTCCGGGAGCGAT
TGCCAGAGGAGAATGAAGGATACTCTATATGACAGGACGCAACACGTATC
GTGCCTTTCCACCCCCAGAGTCCCCGGTCAATTCGTCTCCTGCAAACCCA
CGAATAGACATCGATGATGTAGGAGGGCCTACTTCTCAGCCCCCATTCGA
GTCACCTCGTACACCTGCGCGTCGGCCTCAATTGCCACCTCTCGAGTTCA
AATTTCCGCCTTCACCGGGGGCTGATACACACTCGCGTTCTACTCTATCT
CCCCTCGCAACACCCTTCGAAGAGACTGCCGGACAGACAAAGCCCAATGG
AAGGGAGTCAGCAACACTAGCTGCCCCAGGCCATCTGCCTCAGCTCACCA
GAATCATGTCAACCTCCAGTCTCACTGGTAGTCATAGAAGCAGCAATGAG
TATAACTCTGTTAGCGACAATTCTACAGAAACTCTGCAATCCGAGTACAC
GAACTACTCGACGGCGATGCCGCGTCAGAATATCCCTCGCCACGCGCGAC
ACATGTCGAGTATTGAGTCTCCGGGCATAGCGCCCAAGAGCCAGACTCTA
CTCATGGGATATGCCCAGATCAGTGCATCTTTCACTGTTGACGGTTCGTT
GATCCATCAGTCACATTTTGAGGAAGTGAAGCGAAAAGGTGTTGTTGGTG
GTGCAGGGTCTGCGTCGGGTATGAACAGCGGGAGACCAGCTATGCATAAC
GATAAGAATCGCAAGGGCGGCGGTTTCTGGGGCGCGTTCAAATGGAACGC
GATCGAAGAGTCTCTGAGCGGTTTGCTCTCCAATAATGAGTTGGATGGCT
TGCGAGATATGCGAGGAGTTTCTTCTTCGAAATCCATACCGTTGCTGTCT
ACTACCCAGTCCCTTCTCTTCGTGGACCTACGACTGGCACCGGGAGAAGA
GCAGTCTTACTCCTTTACATTTACCCTGCCATCGGGACTTCCAGCCAGTC
ATAAGGGGAAAGCCATTAAGATATCTTACAATCTCGTCATTGGTACACAG
CGGCCGAGTGGCCATCATGAACCCCAACGAGTCAATCGTATCAGTATACC
TTTCCGCGTTTTCAGCGGCGTCAATGATGCCCTCAGACATCCAGGTTTTC
GTGAAATGGAAGGATCAAACGATATTCGCCGGGGAAGATGTGGAATGTAT
CATTACCTTCAAGAACGTTGCGGAGACGAACGGAGACCCCCGGAACGGGG
GGCAGTCCTCGCATCAGAGACATCCATCGCGAGCTACCAGCTCACATTCA
GAGTCACTGTTTTCGCTCCGATCACCTCAGAAATTCTTCTTCAGTCCACA
TCGCCGCTCATACTCTAGCGTATCCAAAAAGAGCCCGTCGCATCGCCCCT
CTTCATCAGTGAGCTCACCGTTGATCGGTTCTCACAGCTTTCCGCCCCCG
TCCACCCCTCGCAGTGGTCCACCAGCTGGTGGAAAGCACAAGCGCTCAGT
ATCTATTCTTTCTATCGATAGCGAAACAACAGGAGAGCCGACTCCCAGAA
CATCTTCACAATTCAGTCGATCGAGGCCGGTCAGGGGTCATGGGCGCGCT
GCGAGTCTACAAGTTCTTCCGCGAAGGAATGAGTTCTACGAAGAATCATT
TGCAAAAGGTCATGGGGAGATAATGGGTCATGACCTGATGAACCCGTATG
TGCTCCTTCGCGACGAGGCGCGAGTGCAGAAGGTTGGCCCAAACCCGCCG
CCGGCAGTCAAGCCCAAAAGCATCAGTGGGCCGACTTGGACATCAGCCCC
AGACTTCTTGTCGTATGTGGATGACATCCTGGAGCAGAGTGCACGCCAAA
ACTCGCTGCAACCACCCGAGGCGACGCCCGAGAAGCGCGCAAGTCGCGAC
ACATCTACCGGGCACCTTACTTGCAAAGACGCTATTGATCTTGCCATTCT
CCGAAGCAACCAGGCGCTCGGTTCCTCGCGCAGTCCTAACCGGTTTGAGA
TTGCCCGAGACGGGCGCCGAATTGCTGTTGTGGTACTCAACCGTCCCGCG
CACAGGCTGGGCGAAACCATCATCGCCACCGTCAACTTTGCAGACGCGGC
ACTTCCCTGCTACGCCCTGCGGGCGACATTAGAAAGTTCAGAGAGGGTTG
CAGGGCATCTAGCAGTACGATCAAACGCCAGTATTCGTCGTGCGACTCGA
AAGATCCATGCCTCCTATTTCGAAAACACCCTGTATGCAACGCGCGTTAT
TTTCAGTCCGGCTGTTCCGGTATCGGCGACGCCGACCGTCATAACAACTG
GGGTCAATCATGAGTGGGAACTTCGGTTCGAGTTTGTTACTAGCAGTGTT
CACGATGGTTCAGCCCCTTCGGGAGCTCGCTTGCTCGAAACCGTATCGGA
AGACGATCGCGGGCGCATCATGTCCGCGTTGGAGAACTTGGGCTGCGAAT
CGTTCGAAATTGCCATCCCTATCACGATTTACGGAGAGACAGTCCGGGAG
CGATTGCCAGAGGAGAATGAAGGATACTCTATATGACAGGACGCAACACG
TATCGTGCCTTTCCACCCCCAGAGTCCCCGGTCAATTCGTCTCCTGCAAA
CCCACGAATAGACATCGATGATGTAGGAGGGCCTACTTCTCAGCCCCCAT
TCGAGTCACCTCGTACACCTGCGCGTCGGCCTCAATTGCCACCTCTCGAG
TTCAAATTTCCGCCTTCACCGGGGGCTGATACACACTCGCGTTCTACTCT
ATCTCCCCTCGCAACACCCTTCGAAGAGACTGCCGGACAGACAAAGCCCA
ATGGAAGGGAGTCAGCAACACTAGCTGCCCCAGGCCATCTGCCTCAGCTC
ACCAGAATCATGTCAACCTCCAGTCTCACTGGTAGTCATAGAAGCAGCAA
TGAGTATAACTCTGTTAGCGACAATTCTACAGAAACTCTGCAATCCGAGT
ACACGAACTACTCGACGGCGATGCCGCGTCAGAATATCCCTCGCCACGCG
CGACACATGTCGAGTATTGAGTCTCCGGGCATAGCGCCCAAGAGCCAGAC
TCTACTCATGGGATATGCCCAGATCAGTGCATCTTTCACTGTTGACGGTT
CGTTGATCCATCAGTCACATTTTGAGGAAGTGAAGCGAAAAGGTGTTGTT
GGTGGTGCAGGGTCTGCGTCGGGTATGAACAGCGGGAGACCAGCTATGCA
TAACGATAAGAATCGCAAGGGCGGCGGTTTCTGGGGCGCGTTCAAATGGA
ACGCGATCGAAGAGTCTCTGAGCGGTTTGCTCTCCAATAATGAGTTGGAT
GGCTTGCGAGATATGCGAGGAGTTTCTTCTTCGAAATCCATACCGTTGCT
GTCTACTACCCAGTCCCTTCTCTTCGTGGACCTACGACTGGCACCGGGAG
AAGAGCAGTCTTACTCCTTTACATTTACCCTGCCATCGGGACTTCCAGCC
AGTCATAAGGGGAAAGCCATTAAGATATCTTACAATCTCGTCATTGGTAC
ACAGCGGCCGAGTGGCCATCATGAACCCCAACGAGTCAATCGTATCAGTA
TACCTTTCCGCGTTTTCAGCGGCGTCAATGATGCCCTCAGACATCCAGGT
TTTCGTGAAATGGAAGGATCAAACGATATTCGCCGGGGAAGATGTGGAAT
GTATCATTACCTTCAAGAACGTTGCGGAGACGAACGGAGACCCCCGGAAC
GGGGGGCAGTCCTCGCATCAGAGACATCCATCGCGAGCTACCAGCTCACA
TTCAGAGTCACTGTTTTCGCTCCGATCACCTCAGAAATTCTTCTTCAGTC
CACATCGCCGCTCATACTCTAGCGTATCCAAAAAGAGCCCGTCGCATCGC
CCCTCTTCATCAGTGAGCTCACCGTTGATCGGTTCTCACAGCTTTCCGCC
CCCGTCCACCCCTCGCAGTGGTCCACCAGCTGGTGGAAAGCACAAGCGCT
CAGTATCTATTCTTTCTATCGATAGCGAAACAACAGGAGAGCCGACTCCC
AGAACATCTTCACAATTCAGTCGATCGAGGCCGGTCAGGGGTCATGGGCG
CGCTGCGAGTCTACAAGTTCTTCCGCGAAGGAATGAGTTCTACGAAGAAT
CATTTGCAAAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR014848 |
| DBxref | InterPro:IPR014752 |
| DBxref | PFAM:PF08737 |
| Product | Rgp1 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:2598674..2601247 - |
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