You are here

Home

CAN33_54250-T1, CAN33_54250-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_54250-T1
Unique NameCAN33_54250-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2696059..2697402-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_54250-T1 ID=CAN33_54250-T1|Name=CAN33_54250-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1344bp|location=Sequence derived from alignment at NKJJ01000020.1:2696059..2697402- (Aspergillus niger FDAARGOS_311)
ATGGAGGGACTCTTCACTTTGCTCGCATTGAGCATTGTGATGGCCATTAC
GTGAGTCGACTGCCCTTTGGAACTTGTCGCCTGCTTGGTGCGAATTGCCA
ATGCTAATTTTCTTTCCCCCGCTACGTCACATAGATCATTTGTCGTGGGA
TCACTACCGCTCGCTTTCACACTTTCCCCTTCTCAGCTGAGATTAATATC
CTCCCTTGGTATGGGAGTTTTGGTTGGGACATCTTTGATCGTTATAATTC
CGGAGGGAGTCGAAACTCTATACAGCGCAAACTCGCTTAGCAACCGGAAA
GAACTTAGCAGCCGATCGACGACTGCCGTCAATTGGCAACACCAGGCTGT
ACCGGTGACCACTGTCCCGAGGGCATTGGAAGAACCAGACTCCTCAGACG
TCCAGCTCACGCCTCGATCGGTACTATCCGATCTGCCATCCGCACCTGTC
ACGGTACCTACAATCCATTCCACACAAGATGAAAAGCTCAGACTACTGGG
ACGCAAGGACGATACATCGGGCGATCACGCAGACGAGGATCACGATGAAG
ATAACTCGCCCCATGCTTGGATAGGTATTGCACTCATCAGTGGCTTTATC
CTGATGTACCTGATCGATAAATTGCCCGTTTTCGCATCATCCTCCAAACA
GGAGCGAATTCCCTATCATATATCGCTAGATAACTTGGGCTCTGGTCTGC
GGCGCAATTCGTCGCCGTCACGCGAGGGGGGCTTGCTCGATGCCGGTAAT
ATTCCCAGGAGAAGCCACAGCTTTGCAACGACAACTGGACTTGTCATTCA
TGCCGCCGCCGATGGAATTGCATTGGGTGCATCTAGCTCCGACACTGGTC
TGAGCTTCATCATCTTCCTGGCCATCATGGTTCACAAGGCCCCAGCATCA
TTTGGCCTCACCTCGGTGCTACTGAAGCAGGGCCTTTCTAGTCGTACCGC
TAGAGCGCATCTATTGATTTTCAGTCTGGCTGCTCCTGTGGGTGCTCTCA
TGACATTCTTGTTTGTGCAAATCATGGGCTCGGGGTCGGGAGGTGATGAC
GTCGGGAACCGCTGGCGAACCGGTGTACTCCTCTTGTTCTCTGCTGGCAC
ATTCCTGTAAGTTCTTCCTTGGCTCAATTATACGGTACAGGGTGATACTG
ATGTCTTTAGATACGTTGCTATGCACACGATGCAGGAAAACAGCCCGAAC
TCATCTTCACGTGAGTCTCAGGTCAACGGATACGGCGATCATAGAGAAGC
ACCATCAGCATCGGACAAGTCTATGAGGGACCTGATCGCTTCTGTTGTTG
GCATGGTTCTTCCACTGTTCCTACAGATCGGCCATGCCCACTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:2696059..2697402-

>CAN33_54250-T1 ID=CAN33_54250-T1|Name=CAN33_54250-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3618bp|location=Sequence derived from alignment at NKJJ01000020.1:2696059..2697402- (Aspergillus niger FDAARGOS_311)
ATACGTTGCTATGCACACGATGCAGGAAAACAGCCCGAACTCATCTTCAC
GTGAGTCTCAGGTCAACGGATACGGCGATCATAGAGAAGCACCATCAGCA
TCGGACAAGTCTATGAGGGACCTGATCGCTTCTGTTGTTGGCATGGTTCT
TCCACTGTTCCTACAGATCGGCCATGCCCACTAGATCATTTGTCGTGGGA
TCACTACCGCTCGCTTTCACACTTTCCCCTTCTCAGCTGAGATTAATATC
CTCCCTTGGTATGGGAGTTTTGGTTGGGACATCTTTGATCGTTATAATTC
CGGAGGGAGTCGAAACTCTATACAGCGCAAACTCGCTTAGCAACCGGAAA
GAACTTAGCAGCCGATCGACGACTGCCGTCAATTGGCAACACCAGGCTGT
ACCGGTGACCACTGTCCCGAGGGCATTGGAAGAACCAGACTCCTCAGACG
TCCAGCTCACGCCTCGATCGGTACTATCCGATCTGCCATCCGCACCTGTC
ACGGTACCTACAATCCATTCCACACAAGATGAAAAGCTCAGACTACTGGG
ACGCAAGGACGATACATCGGGCGATCACGCAGACGAGGATCACGATGAAG
ATAACTCGCCCCATGCTTGGATAGGTATTGCACTCATCAGTGGCTTTATC
CTGATGTACCTGATCGATAAATTGCCCGTTTTCGCATCATCCTCCAAACA
GGAGCGAATTCCCTATCATATATCGCTAGATAACTTGGGCTCTGGTCTGC
GGCGCAATTCGTCGCCGTCACGCGAGGGGGGCTTGCTCGATGCCGGTAAT
ATTCCCAGGAGAAGCCACAGCTTTGCAACGACAACTGGACTTGTCATTCA
TGCCGCCGCCGATGGAATTGCATTGGGTGCATCTAGCTCCGACACTGGTC
TGAGCTTCATCATCTTCCTGGCCATCATGGTTCACAAGGCCCCAGCATCA
TTTGGCCTCACCTCGGTGCTACTGAAGCAGGGCCTTTCTAGTCGTACCGC
TAGAGCGCATCTATTGATTTTCAGTCTGGCTGCTCCTGTGGGTGCTCTCA
TGACATTCTTGTTTGTGCAAATCATGGGCTCGGGGTCGGGAGGTGATGAC
GTCGGGAACCGCTGGCGAACCGGTGTACTCCTCTTGTTCTCTGCTGGCAC
ATTCCTATGGAGGGACTCTTCACTTTGCTCGCATTGAGCATTGTGATGGC
CATTACATACGTTGCTATGCACACGATGCAGGAAAACAGCCCGAACTCAT
CTTCACGTGAGTCTCAGGTCAACGGATACGGCGATCATAGAGAAGCACCA
TCAGCATCGGACAAGTCTATGAGGGACCTGATCGCTTCTGTTGTTGGCAT
GGTTCTTCCACTGTTCCTACAGATCGGCCATGCCCACTAGATCATTTGTC
GTGGGATCACTACCGCTCGCTTTCACACTTTCCCCTTCTCAGCTGAGATT
AATATCCTCCCTTGGTATGGGAGTTTTGGTTGGGACATCTTTGATCGTTA
TAATTCCGGAGGGAGTCGAAACTCTATACAGCGCAAACTCGCTTAGCAAC
CGGAAAGAACTTAGCAGCCGATCGACGACTGCCGTCAATTGGCAACACCA
GGCTGTACCGGTGACCACTGTCCCGAGGGCATTGGAAGAACCAGACTCCT
CAGACGTCCAGCTCACGCCTCGATCGGTACTATCCGATCTGCCATCCGCA
CCTGTCACGGTACCTACAATCCATTCCACACAAGATGAAAAGCTCAGACT
ACTGGGACGCAAGGACGATACATCGGGCGATCACGCAGACGAGGATCACG
ATGAAGATAACTCGCCCCATGCTTGGATAGGTATTGCACTCATCAGTGGC
TTTATCCTGATGTACCTGATCGATAAATTGCCCGTTTTCGCATCATCCTC
CAAACAGGAGCGAATTCCCTATCATATATCGCTAGATAACTTGGGCTCTG
GTCTGCGGCGCAATTCGTCGCCGTCACGCGAGGGGGGCTTGCTCGATGCC
GGTAATATTCCCAGGAGAAGCCACAGCTTTGCAACGACAACTGGACTTGT
CATTCATGCCGCCGCCGATGGAATTGCATTGGGTGCATCTAGCTCCGACA
CTGGTCTGAGCTTCATCATCTTCCTGGCCATCATGGTTCACAAGGCCCCA
GCATCATTTGGCCTCACCTCGGTGCTACTGAAGCAGGGCCTTTCTAGTCG
TACCGCTAGAGCGCATCTATTGATTTTCAGTCTGGCTGCTCCTGTGGGTG
CTCTCATGACATTCTTGTTTGTGCAAATCATGGGCTCGGGGTCGGGAGGT
GATGACGTCGGGAACCGCTGGCGAACCGGTGTACTCCTCTTGTTCTCTGC
TGGCACATTCCTATGGAGGGACTCTTCACTTTGCTCGCATTGAGCATTGT
GATGGCCATTACATACGTTGCTATGCACACGATGCAGGAAAACAGCCCGA
ACTCATCTTCACGTGAGTCTCAGGTCAACGGATACGGCGATCATAGAGAA
GCACCATCAGCATCGGACAAGTCTATGAGGGACCTGATCGCTTCTGTTGT
TGGCATGGTTCTTCCACTGTTCCTACAGATCGGCCATGCCCACTAGATCA
TTTGTCGTGGGATCACTACCGCTCGCTTTCACACTTTCCCCTTCTCAGCT
GAGATTAATATCCTCCCTTGGTATGGGAGTTTTGGTTGGGACATCTTTGA
TCGTTATAATTCCGGAGGGAGTCGAAACTCTATACAGCGCAAACTCGCTT
AGCAACCGGAAAGAACTTAGCAGCCGATCGACGACTGCCGTCAATTGGCA
ACACCAGGCTGTACCGGTGACCACTGTCCCGAGGGCATTGGAAGAACCAG
ACTCCTCAGACGTCCAGCTCACGCCTCGATCGGTACTATCCGATCTGCCA
TCCGCACCTGTCACGGTACCTACAATCCATTCCACACAAGATGAAAAGCT
CAGACTACTGGGACGCAAGGACGATACATCGGGCGATCACGCAGACGAGG
ATCACGATGAAGATAACTCGCCCCATGCTTGGATAGGTATTGCACTCATC
AGTGGCTTTATCCTGATGTACCTGATCGATAAATTGCCCGTTTTCGCATC
ATCCTCCAAACAGGAGCGAATTCCCTATCATATATCGCTAGATAACTTGG
GCTCTGGTCTGCGGCGCAATTCGTCGCCGTCACGCGAGGGGGGCTTGCTC
GATGCCGGTAATATTCCCAGGAGAAGCCACAGCTTTGCAACGACAACTGG
ACTTGTCATTCATGCCGCCGCCGATGGAATTGCATTGGGTGCATCTAGCT
CCGACACTGGTCTGAGCTTCATCATCTTCCTGGCCATCATGGTTCACAAG
GCCCCAGCATCATTTGGCCTCACCTCGGTGCTACTGAAGCAGGGCCTTTC
TAGTCGTACCGCTAGAGCGCATCTATTGATTTTCAGTCTGGCTGCTCCTG
TGGGTGCTCTCATGACATTCTTGTTTGTGCAAATCATGGGCTCGGGGTCG
GGAGGTGATGACGTCGGGAACCGCTGGCGAACCGGTGTACTCCTCTTGTT
CTCTGCTGGCACATTCCTATGGAGGGACTCTTCACTTTGCTCGCATTGAG
CATTGTGATGGCCATTAC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0030001metal ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0046873metal ion transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_54250CAN33_54250Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54250-T1CAN33_54250-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54250-T1.cdsCAN33_54250-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54250-T1.exon3CAN33_54250-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_54250-T1.exon2CAN33_54250-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_54250-T1.exon1CAN33_54250-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR003689
DBxrefPFAM:PF02535
ProductZIP Zinc transporter family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2696059..2697402 -
Powered by Drupal