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CAN33_54405-T1, CAN33_54405-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_54405-T1
Unique NameCAN33_54405-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2812254..2815300-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_54405-T1 ID=CAN33_54405-T1|Name=CAN33_54405-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=3047bp|location=Sequence derived from alignment at NKJJ01000020.1:2812254..2815300- (Aspergillus niger FDAARGOS_311)
ATGCCCCCATACGTCCCCCGAAAGCGTCTCTCTTCCGAGGATCCGCCCGC
CGCCAAACGCCGTCATGCGACGCCTCCCATCGCCGCCGTCATCGAAGACA
CTGACACCGAATCGTCCCTGAGCGATGTTCCCGAAGAGACGGAAACTCCC
CAGGCACTGGATGGATCGGATGAGGAAAGCAGCGACTCCGACGAGGTTGA
TTGGGAGGACGCCATCGAGTCCAATGCCAACGCCACCCCAGCCACGCCTT
CCATCCTCAACCCCGACCAGCACCAGGACCTGGAGTTGACACTAGACAAG
AACGAGATCCACCTCACTGATCTGCTCGAAGGGAAAAAGGGCCCGTCAAA
GATCGAACGCCAAATCCGCATCCAAACCCATTGTCTACATGTGCAGTTTC
TGCTCCACCACAACGCCATCCGCAATGTCTGGGCCAACGACACCCAGCTC
CACGAGATCCTGCGCCGCAAGCTACCCCAACCCATACACAAAGAGGTCAA
GAAATGGCGCATTGCATCCGGCCTCGAGGCTCCAGAGCCACCGCCCGAGA
AGAAGTCGAAGAAAGGAAAAGGGAAGCAGCGTCGTCAATCAGAACGGGAT
TGGGCTGAAGGCTCGTCGCGACTTGAACCCGGCCAACCTGACATGAGCAG
CGGTGACCCCATTATCATCCTTCTCAAGGTCCTCGCTGCCTACTGGAAGA
GCAAGTTCAAGATCACCGCTCCTGGGCTACGTAAGCAGGGGTATCGCCCC
ATGGCTCAGTTGGAGGCTCAGATCAAGTCCTTCCAGAAGGACGACCACGA
TCCCGAGAAACACGGCGAAAGAATAGCCAGCATTGAGGAGTTCCGCCAGG
CTGCCGAGAACATGCAGGGCTCGCGTGACGTAGGCGCCCAGCTGTTCACG
GCTCTGCTGCGTGCTCTCGACATCGAAGCTCGACTAGTCGCCAGTCTGCA
GCCCCTTGGCTTCGGCTGGACCAAGAGCGAAACCTACACAACCAAGCCAA
GCGCAGACACCGAGCCATCGACGGAGAATGCGGAAACCGAAGACGCCATT
GACGTAGAGTCAGACAGCAGTGAAGACGACACAAAGCCCGCCCGTAGCAA
GTACTTCAGCAAATACGACGAAGACCTGCCCTTCCCCATCTACTGGACCG
AAGTCGCCTCTCCCATCACCCACCAAATCATCCCCGTCGACCCGCTTATC
CTCCGCAACCCTGTCGCCACCACCCCCGAGCTCCAAGCAGCCTTCGAACC
TCGCGGCGGCAAAGCCGAAAAAGCCAAGCAAGTTATCTGCTACGTCGTGG
CCTACTCGTCCGATAAGACTGCCAAAGACGTGACAACACGCTATCTCCGC
CGCCGCACCTGGCCTGGCAAAACCAAAGGCTACCGGATCCCCGTCGAGAA
GATCCCCATACCAGGCCGCAAAGGCAAATACTACGAAGTCGACTGGTTCC
GCGTAATCCTCCGCGTCTACCAACGCGCCCAACCTCAACGCACCGCCGTC
GACGACCTCGAAGACACCAAGGACCTCCTCCCAAACCAACCCGAACGCAA
ACCCGGCAAAGAAGGTGACACGCTCCAAAGCCTGCGCACATCCACGGAAT
TCGTCCTCGAACGCTTCCTCCGGCGCGAAGAAGCTCTCAAACCCGGTGCG
CGACATGTCCGCACCTTCAAGACAGGCAAAGGGGCCAAAGCCAAAGAAGA
GAAAGTCTTCCGACGCAAAGACGTCCTGAAATGTCTATCCGCAGAGAGCT
GGCACAAAGAAGGCCGAAGACCCAAGGCTGGCGAGATGCCCCTGAAACGC
GTGCCCATCCGCGCCGTCACTCTCCTCCGCAAACGCGAAGTCGACGAATT
CGAGCGCCAGAACGGCGAAAAGCCAAAACAGGGCCTCTACGCCATCCATC
AAACGGAATACATCATTCCAGACCCCATCTGTGACGGTGTCATACCTAAA
AACGAATACGGCAATATCGACTGCTTCGTCCCTAGCATGGTGCCCCGCGG
TGCGGTCCATATTCCCTGGCCTGGAACTGTGCGCGTATGCAAGAAACTCG
GCGTCGATTATGCAGAAGCAGTCACAGGCTTCGAGTTCGGGTCGAAGATG
GCTGTCCCTGTTATCCAGGGCGTGGTTGTCGCTGCGGAAAACGAGGACCT
CGTTAAAGATGCCTGGTTAGTGGATGACGCAGAGAAACGTAAGCGGGAGC
AGCGCAAAGCCGAGGCGCGTATTCTGCAGACTTGGCGGAAGTTTCTCTTC
GGGTTGCGGATTAAGCAGCGTGTACAGGAGGAGTATGGTGGGAATGCGGA
CGACGGGGTGGATCATGAGCGTGATGCTCATAATCCGTTTACAAATCGTC
GTGGTCGTTTGCCTGATCCAGATGCTTCTGCTTCTGCTTCTGCCCCTGCT
CCGGATGAGCACGACGAGGAAGTCCATGGTGGCGGGTTCCTACTTCCTGG
TGAGGATGAGGACGGGGCGGATGTAGATCGGGGCGGTGGATTCCTTCTTC
CTGGGCAGGAGGGAGATGATCATGATGATGGGGGATTGATTGTTGATCAT
CATGAGCAACAGCAGCAGCATGTACCGACTGAGCCTGCCACACCGGAGGT
TGTTGATGCGGAGATTGCTGATAGTGATGACGATGACGATGGCAAGGTGG
AGAATCCGATCTCGTTAAGTTCTGACTCGGAGCTCTCGTCTCCCGTAGAG
ATACCGGATTCAGAGGAGTCAGATGCAGAGTCCGAGTCGGAATATGAGCC
GGAGCCGCGGCCGACGCGGAGAAGTACGAGGAGGGGTGGTCGTCGATAGA
TATTGTGTTGTTTTGTTAACTCATGTATGTATAATTGTCTGTATGTTTTC
ATGTTTGGCGTTGGTGGTATGTACCAGGCACAGGGACGGAGGTACTGGAC
GACATAATGACATAGATAGGGATTGCTGATCAATTGCAGAAAAGCATGAT
GATAGTGTATTCGTATCTCACTAAAATAATAATCAATTGCTGTATCGTGT
ACTGCTTTCATCCAGGATCTATAAACATTAATCATATGTAGGTATAG
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Coding sequence (CDS) from alignment at NKJJ01000020.1:2812254..2815300-

>CAN33_54405-T1 ID=CAN33_54405-T1|Name=CAN33_54405-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5400bp|location=Sequence derived from alignment at NKJJ01000020.1:2812254..2815300- (Aspergillus niger FDAARGOS_311)
GTATAGATGCCCCCATACGTCCCCCGAAAGCGTCTCTCTTCCGAGGATCC
GCCCGCCGCCAAACGCCGTCATGCGACGCCTCCCATCGCCGCCGTCATCG
AAGACACTGACACCGAATCGTCCCTGAGCGATGTTCCCGAAGAGACGGAA
ACTCCCCAGGCACTGGATGGATCGGATGAGGAAAGCAGCGACTCCGACGA
GGTTGATTGGGAGGACGCCATCGAGTCCAATGCCAACGCCACCCCAGCCA
CGCCTTCCATCCTCAACCCCGACCAGCACCAGGACCTGGAGTTGACACTA
GACAAGAACGAGATCCACCTCACTGATCTGCTCGAAGGGAAAAAGGGCCC
GTCAAAGATCGAACGCCAAATCCGCATCCAAACCCATTGTCTACATGTGC
AGTTTCTGCTCCACCACAACGCCATCCGCAATGTCTGGGCCAACGACACC
CAGCTCCACGAGATCCTGCGCCGCAAGCTACCCCAACCCATACACAAAGA
GGTCAAGAAATGGCGCATTGCATCCGGCCTCGAGGCTCCAGAGCCACCGC
CCGAGAAGAAGTCGAAGAAAGGAAAAGGGAAGCAGCGTCGTCAATCAGAA
CGGGATTGGGCTGAAGGCTCGTCGCGACTTGAACCCGGCCAACCTGACAT
GAGCAGCGGTGACCCCATTATCATCCTTCTCAAGGTCCTCGCTGCCTACT
GGAAGAGCAAGTTCAAGATCACCGCTCCTGGGCTACGTAAGCAGGGGTAT
CGCCCCATGGCTCAGTTGGAGGCTCAGATCAAGTCCTTCCAGAAGGACGA
CCACGATCCCGAGAAACACGGCGAAAGAATAGCCAGCATTGAGGAGTTCC
GCCAGGCTGCCGAGAACATGCAGGGCTCGCGTGACGTAGGCGCCCAGCTG
TTCACGGCTCTGCTGCGTGCTCTCGACATCGAAGCTCGACTAGTCGCCAG
TCTGCAGCCCCTTGGCTTCGGCTGGACCAAGAGCGAAACCTACACAACCA
AGCCAAGCGCAGACACCGAGCCATCGACGGAGAATGCGGAAACCGAAGAC
GCCATTGACGTAGAGTCAGACAGCAGTGAAGACGACACAAAGCCCGCCCG
TAGCAAGTACTTCAGCAAATACGACGAAGACCTGCCCTTCCCCATCTACT
GGACCGAAGTCGCCTCTCCCATCACCCACCAAATCATCCCCGTCGACCCG
CTTATCCTCCGCAACCCTGTCGCCACCACCCCCGAGCTCCAAGCAGCCTT
CGAACCTCGCGGCGGCAAAGCCGAAAAAGCCAAGCAAGTTATCTGCTACG
TCGTGGCCTACTCGTCCGATAAGACTGCCAAAGACGTGACAACACGCTAT
CTCCGCCGCCGCACCTGGCCTGGCAAAACCAAAGGCTACCGGATCCCCGT
CGAGAAGATCCCCATACCAGGCCGCAAAGGCAAATACTACGAAGTCGACT
GGTTCCGCGTAATCCTCCGCGTCTACCAACGCGCCCAACCTCAACGCACC
GCCGTCGACGACCTCGAAGACACCAAGGACCTCCTCCCAAACCAACCCGA
ACGCAAACCCGGCAAAGAAGGTGACACGCTCCAAAGCCTGCGCACATCCA
CGGAATTCGTCCTCGAACGCTTCCTCCGGCGCGAAGAAGCTCTCAAACCC
GGTGCGCGACATGTCCGCACCTTCAAGACAGGCAAAGGGGCCAAAGCCAA
AGAAGAGAAAGTCTTCCGACGCAAAGACGTCCTGAAATGTCTATCCGCAG
AGAGCTGGCACAAAGAAGGCCGAAGACCCAAGGCTGGCGAGATGCCCCTG
AAACGCGTGCCCATCCGCGCCGTCACTCTCCTCCGCAAACGCGAAGTCGA
CGAATTCGAGCGCCAGAACGGCGAAAAGCCAAAACAGGGCCTCTACGCCA
TCCATCAAACGGAATACATCATTCCAGACCCCATCTGTGACGGTGTCATA
CCTAAAAACGAATACGGCAATATCGACTGCTTCGTCCCTAGCATGGTGCC
CCGCGGTGCGGTCCATATTCCCTGGCCTGGAACTGTGCGCGTATGCAAGA
AACTCGGCGTCGATTATGCAGAAGCAGTCACAGGCTTCGAGTTCGGGTCG
AAGATGGCTGTCCCTGTTATCCAGGGCGTGGTTGTCGCTGCGGAAAACGA
GGACCTCGTTAAAGATGCCTGGTTAGTGGATGACGCAGAGAAACGTAAGC
GGGAGCAGCGCAAAGCCGAGGCGCGTATTCTGCAGACTTGGCGGAAGTTT
CTCTTCGGGTTGCGGATTAAGCAGCGTGTACAGGAGGAGTATGGTGGGAA
TGCGGACGACGGGGTGGATCATGAGCGTGATGCTCATAATCCGTTTACAA
ATCGTCGTGGTCGTTTGCCTGATCCAGATGCTTCTGCTTCTGCTTCTGCC
CCTGCTCCGGATGAGCACGACGAGGAAGTCCATGGTGGCGGGTTCCTACT
TCCTGGTGAGGATGAGGACGGGGCGGATGTAGATCGGGGCGGTGGATTCC
TTCTTCCTGGGCAGGAGGGAGATGATCATGATGATGGGGGATTGATTGTT
GATCATCATGAGCAACAGCAGCAGCATGTACCGACTGAGCCTGCCACACC
GGAGGTTGTTGATGCGGAGATTGCTGATAGTGATGACGATGACGATGGCA
AGGTGGAGAATCCGATCTCGTTAAGTTCTGACTCGGAGCTCTCGTCTCCC
GTATAGATGCCCCCATACGTCCCCCGAAAGCGTCTCTCTTCCGAGGATCC
GCCCGCCGCCAAACGCCGTCATGCGACGCCTCCCATCGCCGCCGTCATCG
AAGACACTGACACCGAATCGTCCCTGAGCGATGTTCCCGAAGAGACGGAA
ACTCCCCAGGCACTGGATGGATCGGATGAGGAAAGCAGCGACTCCGACGA
GGTTGATTGGGAGGACGCCATCGAGTCCAATGCCAACGCCACCCCAGCCA
CGCCTTCCATCCTCAACCCCGACCAGCACCAGGACCTGGAGTTGACACTA
GACAAGAACGAGATCCACCTCACTGATCTGCTCGAAGGGAAAAAGGGCCC
GTCAAAGATCGAACGCCAAATCCGCATCCAAACCCATTGTCTACATGTGC
AGTTTCTGCTCCACCACAACGCCATCCGCAATGTCTGGGCCAACGACACC
CAGCTCCACGAGATCCTGCGCCGCAAGCTACCCCAACCCATACACAAAGA
GGTCAAGAAATGGCGCATTGCATCCGGCCTCGAGGCTCCAGAGCCACCGC
CCGAGAAGAAGTCGAAGAAAGGAAAAGGGAAGCAGCGTCGTCAATCAGAA
CGGGATTGGGCTGAAGGCTCGTCGCGACTTGAACCCGGCCAACCTGACAT
GAGCAGCGGTGACCCCATTATCATCCTTCTCAAGGTCCTCGCTGCCTACT
GGAAGAGCAAGTTCAAGATCACCGCTCCTGGGCTACGTAAGCAGGGGTAT
CGCCCCATGGCTCAGTTGGAGGCTCAGATCAAGTCCTTCCAGAAGGACGA
CCACGATCCCGAGAAACACGGCGAAAGAATAGCCAGCATTGAGGAGTTCC
GCCAGGCTGCCGAGAACATGCAGGGCTCGCGTGACGTAGGCGCCCAGCTG
TTCACGGCTCTGCTGCGTGCTCTCGACATCGAAGCTCGACTAGTCGCCAG
TCTGCAGCCCCTTGGCTTCGGCTGGACCAAGAGCGAAACCTACACAACCA
AGCCAAGCGCAGACACCGAGCCATCGACGGAGAATGCGGAAACCGAAGAC
GCCATTGACGTAGAGTCAGACAGCAGTGAAGACGACACAAAGCCCGCCCG
TAGCAAGTACTTCAGCAAATACGACGAAGACCTGCCCTTCCCCATCTACT
GGACCGAAGTCGCCTCTCCCATCACCCACCAAATCATCCCCGTCGACCCG
CTTATCCTCCGCAACCCTGTCGCCACCACCCCCGAGCTCCAAGCAGCCTT
CGAACCTCGCGGCGGCAAAGCCGAAAAAGCCAAGCAAGTTATCTGCTACG
TCGTGGCCTACTCGTCCGATAAGACTGCCAAAGACGTGACAACACGCTAT
CTCCGCCGCCGCACCTGGCCTGGCAAAACCAAAGGCTACCGGATCCCCGT
CGAGAAGATCCCCATACCAGGCCGCAAAGGCAAATACTACGAAGTCGACT
GGTTCCGCGTAATCCTCCGCGTCTACCAACGCGCCCAACCTCAACGCACC
GCCGTCGACGACCTCGAAGACACCAAGGACCTCCTCCCAAACCAACCCGA
ACGCAAACCCGGCAAAGAAGGTGACACGCTCCAAAGCCTGCGCACATCCA
CGGAATTCGTCCTCGAACGCTTCCTCCGGCGCGAAGAAGCTCTCAAACCC
GGTGCGCGACATGTCCGCACCTTCAAGACAGGCAAAGGGGCCAAAGCCAA
AGAAGAGAAAGTCTTCCGACGCAAAGACGTCCTGAAATGTCTATCCGCAG
AGAGCTGGCACAAAGAAGGCCGAAGACCCAAGGCTGGCGAGATGCCCCTG
AAACGCGTGCCCATCCGCGCCGTCACTCTCCTCCGCAAACGCGAAGTCGA
CGAATTCGAGCGCCAGAACGGCGAAAAGCCAAAACAGGGCCTCTACGCCA
TCCATCAAACGGAATACATCATTCCAGACCCCATCTGTGACGGTGTCATA
CCTAAAAACGAATACGGCAATATCGACTGCTTCGTCCCTAGCATGGTGCC
CCGCGGTGCGGTCCATATTCCCTGGCCTGGAACTGTGCGCGTATGCAAGA
AACTCGGCGTCGATTATGCAGAAGCAGTCACAGGCTTCGAGTTCGGGTCG
AAGATGGCTGTCCCTGTTATCCAGGGCGTGGTTGTCGCTGCGGAAAACGA
GGACCTCGTTAAAGATGCCTGGTTAGTGGATGACGCAGAGAAACGTAAGC
GGGAGCAGCGCAAAGCCGAGGCGCGTATTCTGCAGACTTGGCGGAAGTTT
CTCTTCGGGTTGCGGATTAAGCAGCGTGTACAGGAGGAGTATGGTGGGAA
TGCGGACGACGGGGTGGATCATGAGCGTGATGCTCATAATCCGTTTACAA
ATCGTCGTGGTCGTTTGCCTGATCCAGATGCTTCTGCTTCTGCTTCTGCC
CCTGCTCCGGATGAGCACGACGAGGAAGTCCATGGTGGCGGGTTCCTACT
TCCTGGTGAGGATGAGGACGGGGCGGATGTAGATCGGGGCGGTGGATTCC
TTCTTCCTGGGCAGGAGGGAGATGATCATGATGATGGGGGATTGATTGTT
GATCATCATGAGCAACAGCAGCAGCATGTACCGACTGAGCCTGCCACACC
GGAGGTTGTTGATGCGGAGATTGCTGATAGTGATGACGATGACGATGGCA
AGGTGGAGAATCCGATCTCGTTAAGTTCTGACTCGGAGCTCTCGTCTCCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_54405CAN33_54405Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54405-T1CAN33_54405-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54405-T1.cdsCAN33_54405-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54405-T1.exon2CAN33_54405-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_54405-T1.exon1CAN33_54405-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR038765
DBxrefInterPro:IPR042488
DBxrefInterPro:IPR018325
DBxrefInterPro:IPR018328
DBxrefInterPro:IPR018326
DBxrefInterPro:IPR018327
DBxrefPFAM:PF03835
DBxrefPFAM:PF10405
DBxrefPFAM:PF10404
DBxrefPFAM:PF10403
ProductRad4 transglutaminase-like domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2812254..2815300 -
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