You are here

Home

CAN33_54455-T1, CAN33_54455-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_54455-T1
Unique NameCAN33_54455-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2836848..2837347-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_54455-T1 ID=CAN33_54455-T1|Name=CAN33_54455-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=500bp|location=Sequence derived from alignment at NKJJ01000020.1:2836848..2837347- (Aspergillus niger FDAARGOS_311)
ATGGCCGCTCTTCTCTCCTACCTACCCCCATTCGAGGGTCTGCTGCCCAA
ATGGCTCTTCCTGGTACTAACCCCATTGTTTACACTCCCGTTCCCCGGAC
CGACCCCATGCTAACCTGCCCATTTTTCTCCATCCAGGTCTCCGTCGTCT
CCGCCGCAAACAGCATCCAAGCTTACCGATCGGAGTCCTATGCCGCAGAT
CTCTACAACGGAAAAACTGCTGATGGTCGTCCGCCCACCAACCCTCTCTC
TTCTCGGACTTTCGGTACCTGGACTTTCCTTTCCTCCGTAGTCCGCATGT
ACGCCGCCTATAACCTCAACAACCCTGCTGTCTACGATCTCGCGCTCTGG
ACTTTTGGCATTGCTCTGGTACACTTTGTCGGCGAGTGGTTGGGCTTCGG
TAGTGCGCAGCTTAAGGGGCGTTTTGTCAGCCCTCTGATTGTTGCTTCGT
CTACCCTGGCTTGGATGTTGACGCAGAGGGAGGCGTATCTGGCTGCTTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:2836848..2837347-

>CAN33_54455-T1 ID=CAN33_54455-T1|Name=CAN33_54455-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=852bp|location=Sequence derived from alignment at NKJJ01000020.1:2836848..2837347- (Aspergillus niger FDAARGOS_311)
GTCTCCGTCGTCTCCGCCGCAAACAGCATCCAAGCTTACCGATCGGAGTC
CTATGCCGCAGATCTCTACAACGGAAAAACTGCTGATGGTCGTCCGCCCA
CCAACCCTCTCTCTTCTCGGACTTTCGGTACCTGGACTTTCCTTTCCTCC
GTAGTCCGCATGTACGCCGCCTATAACCTCAACAACCCTGCTGTCTACGA
TCTCGCGCTCTGGACTTTTGGCATTGCTCTGGTACACTTTGTCGGCGAGT
GGTTGGGCTTCGGTAGTGCGCAGCTTAAGGGGCGTTTTGTCAGCCCTCTG
ATTGTTGCTTCGTCTACCCTGGCTTGGATGTTGACGCAGAGGGAGGCGTA
TCTGGCTGCTTAGATGGCCGCTCTTCTCTCCTACCTACCCCCATTCGAGG
GTCTGCTGCCCAAATGGCTCTTCCTGGTCTCCGTCGTCTCCGCCGCAAAC
AGCATCCAAGCTTACCGATCGGAGTCCTATGCCGCAGATCTCTACAACGG
AAAAACTGCTGATGGTCGTCCGCCCACCAACCCTCTCTCTTCTCGGACTT
TCGGTACCTGGACTTTCCTTTCCTCCGTAGTCCGCATGTACGCCGCCTAT
AACCTCAACAACCCTGCTGTCTACGATCTCGCGCTCTGGACTTTTGGCAT
TGCTCTGGTACACTTTGTCGGCGAGTGGTTGGGCTTCGGTAGTGCGCAGC
TTAAGGGGCGTTTTGTCAGCCCTCTGATTGTTGCTTCGTCTACCCTGGCT
TGGATGTTGACGCAGAGGGAGGCGTATCTGGCTGCTTAGATGGCCGCTCT
TCTCTCCTACCTACCCCCATTCGAGGGTCTGCTGCCCAAATGGCTCTTCC
TG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_54455CAN33_54455Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54455-T1CAN33_54455-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54455-T1.cdsCAN33_54455-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54455-T1.exon2CAN33_54455-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_54455-T1.exon1CAN33_54455-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-27)
NoteBUSCO:EOG092655IF
DBxrefInterPro:IPR005352
DBxrefPFAM:PF03694
ProductErg28 like protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2836848..2837347 -
Powered by Drupal