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CAN33_54460-T1, CAN33_54460-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_54460-T1
Unique NameCAN33_54460-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2837631..2838728+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_54460-T1 ID=CAN33_54460-T1|Name=CAN33_54460-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1098bp|location=Sequence derived from alignment at NKJJ01000020.1:2837631..2838728+ (Aspergillus niger FDAARGOS_311)
ATGGACTTTCTGACAAAACATCTGGACTGCCTGTCCAACTGGCAGTTGAA
CCTGCAGCCTGGCTGGCAGACGGTGGGCGCCTCGGCTCTTCTCGCCGCTG
GCAGCTTGTTCGTCGTCTCTCGGGCACTCGTTTTCGTCAGGGTCCTCCTG
AGCTTGTTCGTGCTCCCTGGCAAGCCCGTATGTTGTCCCTGACAATCTCA
ATTGGAGACTATATCACTGACTTCCAATCTGCCAGCTCCGCTCCTTCGGC
CCTAAGGGCAGCTGGGCCGTGGTCACAGGTGCCTCCGATGGACTCGGCAA
GGAATTCGCTCTTCAGCTCGCCCGCGCTGACTTCAACATCCTCCTCGTTT
CCCGTACTGCATCCAAGCTTGATACCCTTTCCAATGAAATCACAACCAAG
TTCCCCTCCGTGCAGACCAAGACCTTGGCGATGGACTTCGCCCGCAACCA
GGACAGCGACTACGAGAAGCTGAAGGAATTGGTGGATGAATTGGACGTGT
CCGTCCTGGTCAACAACGTTGGAAAGAGTCACAGCATCCCCACTCCCTTC
GCTCTGACCCCGAGGATGAGATGACTGATATCGTGACCATCAACTGCCTG
GGTACCTTGCGGGCCACCCAGCTGGTCGTTCCGGGTATGATGCAGCGCAA
GCGCGGATTGGTCTTGACTATGGGCTCGTTCGGTGGACTTCTCCCCACTC
CTCTTCTTGCTACCTACTCCGGCAGCAAGGCTTTCCTGCAGCAATGGTCC
ACTTCCCTTGGTTCGGAGCTCGAGCCTTACGGAATTACTGTCGAGTTGGT
CCAGGCCTACCTTATCACCTCTGCTATGTCCAAGATCCGCCGGACCAGTG
CTACGATCCCCGACCCCCGCTCATTCGTGAAGTCGGTCCTGACTAAGATT
GGCCGCAACGGCGGATCTCCCACGTACGCGTACAGCTCTTCCCCTTACTG
GAGCCACGGATTGATGGCCTGGTTCTTGACCTGCGTCACTGGTACCATGG
GCAAGATTGTCGTTAGCCAGAACAAGGGCATGCACGAGTCTATCCGGAAG
CGTGCTCTGCGCAAGGCCGAGCGCGAGAAGGGCAAGAAGAGCACCTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:2837631..2838728+

>CAN33_54460-T1 ID=CAN33_54460-T1|Name=CAN33_54460-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2979bp|location=Sequence derived from alignment at NKJJ01000020.1:2837631..2838728+ (Aspergillus niger FDAARGOS_311)
ATGGACTTTCTGACAAAACATCTGGACTGCCTGTCCAACTGGCAGTTGAA
CCTGCAGCCTGGCTGGCAGACGGTGGGCGCCTCGGCTCTTCTCGCCGCTG
GCAGCTTGTTCGTCGTCTCTCGGGCACTCGTTTTCGTCAGGGTCCTCCTG
AGCTTGTTCGTGCTCCCTGGCAAGCCCCTCCGCTCCTTCGGCCCTAAGGG
CAGCTGGGCCGTGGTCACAGGTGCCTCCGATGGACTCGGCAAGGAATTCG
CTCTTCAGCTCGCCCGCGCTGACTTCAACATCCTCCTCGTTTCCCGTACT
GCATCCAAGCTTGATACCCTTTCCAATGAAATCACAACCAAGTTCCCCTC
CGTGCAGACCAAGACCTTGGCGATGGACTTCGCCCGCAACCAGGACAGCG
ACTACGAGAAGCTGAAGGAATTGGTGGATGAATTGGACGTGTCCGTCCTG
GTCAACAACGATGAGATGACTGATATCGTGACCATCAACTGCCTGGGTAC
CTTGCGGGCCACCCAGCTGGTCGTTCCGGGTATGATGCAGCGCAAGCGCG
GATTGGTCTTGACTATGGGCTCGTTCGGTGGACTTCTCCCCACTCCTCTT
CTTGCTACCTACTCCGGCAGCAAGGCTTTCCTGCAGCAATGGTCCACTTC
CCTTGGTTCGGAGCTCGAGCCTTACGGAATTACTGTCGAGTTGGTCCAGG
CCTACCTTATCACCTCTGCTATGTCCAAGATCCGCCGGACCAGTGCTACG
ATCCCCGACCCCCGCTCATTCGTGAAGTCGGTCCTGACTAAGATTGGCCG
CAACGGCGGATCTCCCACGTACGCGTACAGCTCTTCCCCTTACTGGAGCC
ACGGATTGATGGCCTGGTTCTTGACCTGCGTCACTGGTACCATGGGCAAG
ATTGTCGTTAGCCAGAACAAGGGCATGCACGAGTCTATCCGGAAGCGTGC
TCTGCGCAAGGCCGAGCGCGAGAAGGGCAAGAAGAGCACCTAAATGGACT
TTCTGACAAAACATCTGGACTGCCTGTCCAACTGGCAGTTGAACCTGCAG
CCTGGCTGGCAGACGGTGGGCGCCTCGGCTCTTCTCGCCGCTGGCAGCTT
GTTCGTCGTCTCTCGGGCACTCGTTTTCGTCAGGGTCCTCCTGAGCTTGT
TCGTGCTCCCTGGCAAGCCCCTCCGCTCCTTCGGCCCTAAGGGCAGCTGG
GCCGTGGTCACAGGTGCCTCCGATGGACTCGGCAAGGAATTCGCTCTTCA
GCTCGCCCGCGCTGACTTCAACATCCTCCTCGTTTCCCGTACTGCATCCA
AGCTTGATACCCTTTCCAATGAAATCACAACCAAGTTCCCCTCCGTGCAG
ACCAAGACCTTGGCGATGGACTTCGCCCGCAACCAGGACAGCGACTACGA
GAAGCTGAAGGAATTGGTGGATGAATTGGACGTGTCCGTCCTGGTCAACA
ACGATGAGATGACTGATATCGTGACCATCAACTGCCTGGGTACCTTGCGG
GCCACCCAGCTGGTCGTTCCGGGTATGATGCAGCGCAAGCGCGGATTGGT
CTTGACTATGGGCTCGTTCGGTGGACTTCTCCCCACTCCTCTTCTTGCTA
CCTACTCCGGCAGCAAGGCTTTCCTGCAGCAATGGTCCACTTCCCTTGGT
TCGGAGCTCGAGCCTTACGGAATTACTGTCGAGTTGGTCCAGGCCTACCT
TATCACCTCTGCTATGTCCAAGATCCGCCGGACCAGTGCTACGATCCCCG
ACCCCCGCTCATTCGTGAAGTCGGTCCTGACTAAGATTGGCCGCAACGGC
GGATCTCCCACGTACGCGTACAGCTCTTCCCCTTACTGGAGCCACGGATT
GATGGCCTGGTTCTTGACCTGCGTCACTGGTACCATGGGCAAGATTGTCG
TTAGCCAGAACAAGGGCATGCACGAGTCTATCCGGAAGCGTGCTCTGCGC
AAGGCCGAGCGCGAGAAGGGCAAGAAGAGCACCTAAATGGACTTTCTGAC
AAAACATCTGGACTGCCTGTCCAACTGGCAGTTGAACCTGCAGCCTGGCT
GGCAGACGGTGGGCGCCTCGGCTCTTCTCGCCGCTGGCAGCTTGTTCGTC
GTCTCTCGGGCACTCGTTTTCGTCAGGGTCCTCCTGAGCTTGTTCGTGCT
CCCTGGCAAGCCCCTCCGCTCCTTCGGCCCTAAGGGCAGCTGGGCCGTGG
TCACAGGTGCCTCCGATGGACTCGGCAAGGAATTCGCTCTTCAGCTCGCC
CGCGCTGACTTCAACATCCTCCTCGTTTCCCGTACTGCATCCAAGCTTGA
TACCCTTTCCAATGAAATCACAACCAAGTTCCCCTCCGTGCAGACCAAGA
CCTTGGCGATGGACTTCGCCCGCAACCAGGACAGCGACTACGAGAAGCTG
AAGGAATTGGTGGATGAATTGGACGTGTCCGTCCTGGTCAACAACGATGA
GATGACTGATATCGTGACCATCAACTGCCTGGGTACCTTGCGGGCCACCC
AGCTGGTCGTTCCGGGTATGATGCAGCGCAAGCGCGGATTGGTCTTGACT
ATGGGCTCGTTCGGTGGACTTCTCCCCACTCCTCTTCTTGCTACCTACTC
CGGCAGCAAGGCTTTCCTGCAGCAATGGTCCACTTCCCTTGGTTCGGAGC
TCGAGCCTTACGGAATTACTGTCGAGTTGGTCCAGGCCTACCTTATCACC
TCTGCTATGTCCAAGATCCGCCGGACCAGTGCTACGATCCCCGACCCCCG
CTCATTCGTGAAGTCGGTCCTGACTAAGATTGGCCGCAACGGCGGATCTC
CCACGTACGCGTACAGCTCTTCCCCTTACTGGAGCCACGGATTGATGGCC
TGGTTCTTGACCTGCGTCACTGGTACCATGGGCAAGATTGTCGTTAGCCA
GAACAAGGGCATGCACGAGTCTATCCGGAAGCGTGCTCTGCGCAAGGCCG
AGCGCGAGAAGGGCAAGAAGAGCACCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
Vocabulary: Biological Process
TermDefinition
GO:0030497fatty acid elongation
Vocabulary: Molecular Function
TermDefinition
GO:0045703ketoreductase activity
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_54460CAN33_54460Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54460-T1.exon1CAN33_54460-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_54460-T1.exon2CAN33_54460-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_54460-T1.exon3CAN33_54460-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54460-T1.cdsCAN33_54460-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54460-T1CAN33_54460-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926310O
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR027533
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2837631..2838728 +
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