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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:2837631..2838728+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_54460-T1 ID=CAN33_54460-T1|Name=CAN33_54460-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1098bp|location=Sequence derived from alignment at NKJJ01000020.1:2837631..2838728+ (Aspergillus niger FDAARGOS_311)
ATGGACTTTCTGACAAAACATCTGGACTGCCTGTCCAACTGGCAGTTGAA
CCTGCAGCCTGGCTGGCAGACGGTGGGCGCCTCGGCTCTTCTCGCCGCTG
GCAGCTTGTTCGTCGTCTCTCGGGCACTCGTTTTCGTCAGGGTCCTCCTG
AGCTTGTTCGTGCTCCCTGGCAAGCCCGTATGTTGTCCCTGACAATCTCA
ATTGGAGACTATATCACTGACTTCCAATCTGCCAGCTCCGCTCCTTCGGC
CCTAAGGGCAGCTGGGCCGTGGTCACAGGTGCCTCCGATGGACTCGGCAA
GGAATTCGCTCTTCAGCTCGCCCGCGCTGACTTCAACATCCTCCTCGTTT
CCCGTACTGCATCCAAGCTTGATACCCTTTCCAATGAAATCACAACCAAG
TTCCCCTCCGTGCAGACCAAGACCTTGGCGATGGACTTCGCCCGCAACCA
GGACAGCGACTACGAGAAGCTGAAGGAATTGGTGGATGAATTGGACGTGT
CCGTCCTGGTCAACAACGTTGGAAAGAGTCACAGCATCCCCACTCCCTTC
GCTCTGACCCCGAGGATGAGATGACTGATATCGTGACCATCAACTGCCTG
GGTACCTTGCGGGCCACCCAGCTGGTCGTTCCGGGTATGATGCAGCGCAA
GCGCGGATTGGTCTTGACTATGGGCTCGTTCGGTGGACTTCTCCCCACTC
CTCTTCTTGCTACCTACTCCGGCAGCAAGGCTTTCCTGCAGCAATGGTCC
ACTTCCCTTGGTTCGGAGCTCGAGCCTTACGGAATTACTGTCGAGTTGGT
CCAGGCCTACCTTATCACCTCTGCTATGTCCAAGATCCGCCGGACCAGTG
CTACGATCCCCGACCCCCGCTCATTCGTGAAGTCGGTCCTGACTAAGATT
GGCCGCAACGGCGGATCTCCCACGTACGCGTACAGCTCTTCCCCTTACTG
GAGCCACGGATTGATGGCCTGGTTCTTGACCTGCGTCACTGGTACCATGG
GCAAGATTGTCGTTAGCCAGAACAAGGGCATGCACGAGTCTATCCGGAAG
CGTGCTCTGCGCAAGGCCGAGCGCGAGAAGGGCAAGAAGAGCACCTAA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:2837631..2838728+ >CAN33_54460-T1 ID=CAN33_54460-T1|Name=CAN33_54460-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2979bp|location=Sequence derived from alignment at NKJJ01000020.1:2837631..2838728+ (Aspergillus niger FDAARGOS_311)
ATGGACTTTCTGACAAAACATCTGGACTGCCTGTCCAACTGGCAGTTGAA
CCTGCAGCCTGGCTGGCAGACGGTGGGCGCCTCGGCTCTTCTCGCCGCTG
GCAGCTTGTTCGTCGTCTCTCGGGCACTCGTTTTCGTCAGGGTCCTCCTG
AGCTTGTTCGTGCTCCCTGGCAAGCCCCTCCGCTCCTTCGGCCCTAAGGG
CAGCTGGGCCGTGGTCACAGGTGCCTCCGATGGACTCGGCAAGGAATTCG
CTCTTCAGCTCGCCCGCGCTGACTTCAACATCCTCCTCGTTTCCCGTACT
GCATCCAAGCTTGATACCCTTTCCAATGAAATCACAACCAAGTTCCCCTC
CGTGCAGACCAAGACCTTGGCGATGGACTTCGCCCGCAACCAGGACAGCG
ACTACGAGAAGCTGAAGGAATTGGTGGATGAATTGGACGTGTCCGTCCTG
GTCAACAACGATGAGATGACTGATATCGTGACCATCAACTGCCTGGGTAC
CTTGCGGGCCACCCAGCTGGTCGTTCCGGGTATGATGCAGCGCAAGCGCG
GATTGGTCTTGACTATGGGCTCGTTCGGTGGACTTCTCCCCACTCCTCTT
CTTGCTACCTACTCCGGCAGCAAGGCTTTCCTGCAGCAATGGTCCACTTC
CCTTGGTTCGGAGCTCGAGCCTTACGGAATTACTGTCGAGTTGGTCCAGG
CCTACCTTATCACCTCTGCTATGTCCAAGATCCGCCGGACCAGTGCTACG
ATCCCCGACCCCCGCTCATTCGTGAAGTCGGTCCTGACTAAGATTGGCCG
CAACGGCGGATCTCCCACGTACGCGTACAGCTCTTCCCCTTACTGGAGCC
ACGGATTGATGGCCTGGTTCTTGACCTGCGTCACTGGTACCATGGGCAAG
ATTGTCGTTAGCCAGAACAAGGGCATGCACGAGTCTATCCGGAAGCGTGC
TCTGCGCAAGGCCGAGCGCGAGAAGGGCAAGAAGAGCACCTAAATGGACT
TTCTGACAAAACATCTGGACTGCCTGTCCAACTGGCAGTTGAACCTGCAG
CCTGGCTGGCAGACGGTGGGCGCCTCGGCTCTTCTCGCCGCTGGCAGCTT
GTTCGTCGTCTCTCGGGCACTCGTTTTCGTCAGGGTCCTCCTGAGCTTGT
TCGTGCTCCCTGGCAAGCCCCTCCGCTCCTTCGGCCCTAAGGGCAGCTGG
GCCGTGGTCACAGGTGCCTCCGATGGACTCGGCAAGGAATTCGCTCTTCA
GCTCGCCCGCGCTGACTTCAACATCCTCCTCGTTTCCCGTACTGCATCCA
AGCTTGATACCCTTTCCAATGAAATCACAACCAAGTTCCCCTCCGTGCAG
ACCAAGACCTTGGCGATGGACTTCGCCCGCAACCAGGACAGCGACTACGA
GAAGCTGAAGGAATTGGTGGATGAATTGGACGTGTCCGTCCTGGTCAACA
ACGATGAGATGACTGATATCGTGACCATCAACTGCCTGGGTACCTTGCGG
GCCACCCAGCTGGTCGTTCCGGGTATGATGCAGCGCAAGCGCGGATTGGT
CTTGACTATGGGCTCGTTCGGTGGACTTCTCCCCACTCCTCTTCTTGCTA
CCTACTCCGGCAGCAAGGCTTTCCTGCAGCAATGGTCCACTTCCCTTGGT
TCGGAGCTCGAGCCTTACGGAATTACTGTCGAGTTGGTCCAGGCCTACCT
TATCACCTCTGCTATGTCCAAGATCCGCCGGACCAGTGCTACGATCCCCG
ACCCCCGCTCATTCGTGAAGTCGGTCCTGACTAAGATTGGCCGCAACGGC
GGATCTCCCACGTACGCGTACAGCTCTTCCCCTTACTGGAGCCACGGATT
GATGGCCTGGTTCTTGACCTGCGTCACTGGTACCATGGGCAAGATTGTCG
TTAGCCAGAACAAGGGCATGCACGAGTCTATCCGGAAGCGTGCTCTGCGC
AAGGCCGAGCGCGAGAAGGGCAAGAAGAGCACCTAAATGGACTTTCTGAC
AAAACATCTGGACTGCCTGTCCAACTGGCAGTTGAACCTGCAGCCTGGCT
GGCAGACGGTGGGCGCCTCGGCTCTTCTCGCCGCTGGCAGCTTGTTCGTC
GTCTCTCGGGCACTCGTTTTCGTCAGGGTCCTCCTGAGCTTGTTCGTGCT
CCCTGGCAAGCCCCTCCGCTCCTTCGGCCCTAAGGGCAGCTGGGCCGTGG
TCACAGGTGCCTCCGATGGACTCGGCAAGGAATTCGCTCTTCAGCTCGCC
CGCGCTGACTTCAACATCCTCCTCGTTTCCCGTACTGCATCCAAGCTTGA
TACCCTTTCCAATGAAATCACAACCAAGTTCCCCTCCGTGCAGACCAAGA
CCTTGGCGATGGACTTCGCCCGCAACCAGGACAGCGACTACGAGAAGCTG
AAGGAATTGGTGGATGAATTGGACGTGTCCGTCCTGGTCAACAACGATGA
GATGACTGATATCGTGACCATCAACTGCCTGGGTACCTTGCGGGCCACCC
AGCTGGTCGTTCCGGGTATGATGCAGCGCAAGCGCGGATTGGTCTTGACT
ATGGGCTCGTTCGGTGGACTTCTCCCCACTCCTCTTCTTGCTACCTACTC
CGGCAGCAAGGCTTTCCTGCAGCAATGGTCCACTTCCCTTGGTTCGGAGC
TCGAGCCTTACGGAATTACTGTCGAGTTGGTCCAGGCCTACCTTATCACC
TCTGCTATGTCCAAGATCCGCCGGACCAGTGCTACGATCCCCGACCCCCG
CTCATTCGTGAAGTCGGTCCTGACTAAGATTGGCCGCAACGGCGGATCTC
CCACGTACGCGTACAGCTCTTCCCCTTACTGGAGCCACGGATTGATGGCC
TGGTTCTTGACCTGCGTCACTGGTACCATGGGCAAGATTGTCGTTAGCCA
GAACAAGGGCATGCACGAGTCTATCCGGAAGCGTGCTCTGCGCAAGGCCG
AGCGCGAGAAGGGCAAGAAGAGCACCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005783 | endoplasmic reticulum |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0030497 | fatty acid elongation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0045703 | ketoreductase activity |
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926310O |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR027533 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:2837631..2838728 + |
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