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CAN33_54485-T1, CAN33_54485-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_54485-T1
Unique NameCAN33_54485-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2854271..2855689+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_54485-T1 ID=CAN33_54485-T1|Name=CAN33_54485-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1419bp|location=Sequence derived from alignment at NKJJ01000020.1:2854271..2855689+ (Aspergillus niger FDAARGOS_311)
ATGCCCATCTGCATCGAGTGCTCCTACCCGGTCTCTCATTTATACAGCAC
ATACAGTCGCGCCGATGACCGATCCCTGGGCAAAGGAGTGCGTCTGACGC
AATGTCCGCGCTGCCAGCGGTTCGCGGACAAATACGTCGAGCATGATTTC
GTCGTGATCTTCATTGATCTCGTCCTTATCAAGCCGCAGGTATGTGAATT
GCACGCATAGGTAATAGTCTCGCTGACGGATTACCAAGGTGTATCGCCAT
CTGCTTTTCAATCGGCTAGGGGGAGACGACAACCAATTCGATGTAAGCGC
ACGCTATCTACGTCCACCTACGACATTGCAGACTGCGACTAACACATCTC
ATTTGCTCAGCGCTCCATAATCCGTCTAGGGATTCTACTACTCCTATTTG
ACGTCTACTTGACATGGGCACGGATTGAGAAATCTCCATCACTCGCAACC
ACCTTCCTTTCGCGCGCGCCCATCATCGTCCAATACCTCTTCTTCCTGAG
CCTGAATGCGCTGGCGACTCTTGCCCACCACCTTACCATCCGTCTTCTGG
CATCGATCCTGGCCCCAACGCCCCGCGGATATATTGGCTCTTCTCAGCAT
GGCAATGCGACAGAGGCGCCTATCTTCTCCAATCCCTCCACACCCATACT
CCCATCATTCCCGTCGCAGACCAACAACAGCCAAACGCAGCTCTCGCCTA
CGCCAGCATCGACACTGAGTCCGCCGAAGCTTACCCCACAAGGCTCCTCC
AACGATGTATCAACAGTAGCGAGCGCTTCAGGCAGTGACATCCACCACCT
CCCTCCTACAACCCCACAAGGATCTTTCACCACCCTCCCACCACCTCTCC
GACGTGCCTCCACCGCCCCAGCACAAAGCATCAGACCCCTTCCGCCCCCC
TCACCAGCCAGCCCAACCGCTATCAGCACCGCCTTGCTTGTCAGCAGTTG
CGCGAAGCTCTTCCCCATCCTTCTGGTCATATGGGGCCCGGACGGCAGCG
GAAATGCGTCCAATGTTTCCGGCTCTAACAATACTTTGCTCAGCGCCGGT
AGCCAGACAACCGTCATGCAGCAGACATTGGATGGCAGCGGCCTCGCTCC
CACGGCGACCCTCACCGCAGCTCACCCGACTGCCACGGGGACTTCGTCTC
TGCCTGGTTCGTCCTCGCTGCTGGAAAGTCTTCTCAGGATTATGCCCGAG
TCTGTACCTACCAGCTATCTGGCTAGCTTTATTGACCTGCTTGGACCGCT
ACTCTCTCTGGGCGCGGCGGACACGCATCTCGTGCTGCTAAGCAACATCG
AAGCATTGTATATCCTGCTTGGGTGCGGGTACCTGCGCGCGGTGGCATTA
GCAGTGGCAGGGTTGGCTGCTCGGTGGACTGTACAGAGGGTGATATTGGG
GGCAGTTGGAGTTGGTTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:2854271..2855689+

>CAN33_54485-T1 ID=CAN33_54485-T1|Name=CAN33_54485-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3906bp|location=Sequence derived from alignment at NKJJ01000020.1:2854271..2855689+ (Aspergillus niger FDAARGOS_311)
ATGCCCATCTGCATCGAGTGCTCCTACCCGGTCTCTCATTTATACAGCAC
ATACAGTCGCGCCGATGACCGATCCCTGGGCAAAGGAGTGCGTCTGACGC
AATGTCCGCGCTGCCAGCGGTTCGCGGACAAATACGTCGAGCATGATTTC
GTCGTGATCTTCATTGATCTCGTCCTTATCAAGCCGCAGGTGTATCGCCA
TCTGCTTTTCAATCGGCTAGGGGGAGACGACAACCAATTCGATCGCTCCA
TAATCCGTCTAGGGATTCTACTACTCCTATTTGACGTCTACTTGACATGG
GCACGGATTGAGAAATCTCCATCACTCGCAACCACCTTCCTTTCGCGCGC
GCCCATCATCGTCCAATACCTCTTCTTCCTGAGCCTGAATGCGCTGGCGA
CTCTTGCCCACCACCTTACCATCCGTCTTCTGGCATCGATCCTGGCCCCA
ACGCCCCGCGGATATATTGGCTCTTCTCAGCATGGCAATGCGACAGAGGC
GCCTATCTTCTCCAATCCCTCCACACCCATACTCCCATCATTCCCGTCGC
AGACCAACAACAGCCAAACGCAGCTCTCGCCTACGCCAGCATCGACACTG
AGTCCGCCGAAGCTTACCCCACAAGGCTCCTCCAACGATGTATCAACAGT
AGCGAGCGCTTCAGGCAGTGACATCCACCACCTCCCTCCTACAACCCCAC
AAGGATCTTTCACCACCCTCCCACCACCTCTCCGACGTGCCTCCACCGCC
CCAGCACAAAGCATCAGACCCCTTCCGCCCCCCTCACCAGCCAGCCCAAC
CGCTATCAGCACCGCCTTGCTTGTCAGCAGTTGCGCGAAGCTCTTCCCCA
TCCTTCTGGTCATATGGGGCCCGGACGGCAGCGGAAATGCGTCCAATGTT
TCCGGCTCTAACAATACTTTGCTCAGCGCCGGTAGCCAGACAACCGTCAT
GCAGCAGACATTGGATGGCAGCGGCCTCGCTCCCACGGCGACCCTCACCG
CAGCTCACCCGACTGCCACGGGGACTTCGTCTCTGCCTGGTTCGTCCTCG
CTGCTGGAAAGTCTTCTCAGGATTATGCCCGAGTCTGTACCTACCAGCTA
TCTGGCTAGCTTTATTGACCTGCTTGGACCGCTACTCTCTCTGGGCGCGG
CGGACACGCATCTCGTGCTGCTAAGCAACATCGAAGCATTGTATATCCTG
CTTGGGTGCGGGTACCTGCGCGCGGTGGCATTAGCAGTGGCAGGGTTGGC
TGCTCGGTGGACTGTACAGAGGGTGATATTGGGGGCAGTTGGAGTTGGTT
AAATGCCCATCTGCATCGAGTGCTCCTACCCGGTCTCTCATTTATACAGC
ACATACAGTCGCGCCGATGACCGATCCCTGGGCAAAGGAGTGCGTCTGAC
GCAATGTCCGCGCTGCCAGCGGTTCGCGGACAAATACGTCGAGCATGATT
TCGTCGTGATCTTCATTGATCTCGTCCTTATCAAGCCGCAGGTGTATCGC
CATCTGCTTTTCAATCGGCTAGGGGGAGACGACAACCAATTCGATCGCTC
CATAATCCGTCTAGGGATTCTACTACTCCTATTTGACGTCTACTTGACAT
GGGCACGGATTGAGAAATCTCCATCACTCGCAACCACCTTCCTTTCGCGC
GCGCCCATCATCGTCCAATACCTCTTCTTCCTGAGCCTGAATGCGCTGGC
GACTCTTGCCCACCACCTTACCATCCGTCTTCTGGCATCGATCCTGGCCC
CAACGCCCCGCGGATATATTGGCTCTTCTCAGCATGGCAATGCGACAGAG
GCGCCTATCTTCTCCAATCCCTCCACACCCATACTCCCATCATTCCCGTC
GCAGACCAACAACAGCCAAACGCAGCTCTCGCCTACGCCAGCATCGACAC
TGAGTCCGCCGAAGCTTACCCCACAAGGCTCCTCCAACGATGTATCAACA
GTAGCGAGCGCTTCAGGCAGTGACATCCACCACCTCCCTCCTACAACCCC
ACAAGGATCTTTCACCACCCTCCCACCACCTCTCCGACGTGCCTCCACCG
CCCCAGCACAAAGCATCAGACCCCTTCCGCCCCCCTCACCAGCCAGCCCA
ACCGCTATCAGCACCGCCTTGCTTGTCAGCAGTTGCGCGAAGCTCTTCCC
CATCCTTCTGGTCATATGGGGCCCGGACGGCAGCGGAAATGCGTCCAATG
TTTCCGGCTCTAACAATACTTTGCTCAGCGCCGGTAGCCAGACAACCGTC
ATGCAGCAGACATTGGATGGCAGCGGCCTCGCTCCCACGGCGACCCTCAC
CGCAGCTCACCCGACTGCCACGGGGACTTCGTCTCTGCCTGGTTCGTCCT
CGCTGCTGGAAAGTCTTCTCAGGATTATGCCCGAGTCTGTACCTACCAGC
TATCTGGCTAGCTTTATTGACCTGCTTGGACCGCTACTCTCTCTGGGCGC
GGCGGACACGCATCTCGTGCTGCTAAGCAACATCGAAGCATTGTATATCC
TGCTTGGGTGCGGGTACCTGCGCGCGGTGGCATTAGCAGTGGCAGGGTTG
GCTGCTCGGTGGACTGTACAGAGGGTGATATTGGGGGCAGTTGGAGTTGG
TTAAATGCCCATCTGCATCGAGTGCTCCTACCCGGTCTCTCATTTATACA
GCACATACAGTCGCGCCGATGACCGATCCCTGGGCAAAGGAGTGCGTCTG
ACGCAATGTCCGCGCTGCCAGCGGTTCGCGGACAAATACGTCGAGCATGA
TTTCGTCGTGATCTTCATTGATCTCGTCCTTATCAAGCCGCAGGTGTATC
GCCATCTGCTTTTCAATCGGCTAGGGGGAGACGACAACCAATTCGATCGC
TCCATAATCCGTCTAGGGATTCTACTACTCCTATTTGACGTCTACTTGAC
ATGGGCACGGATTGAGAAATCTCCATCACTCGCAACCACCTTCCTTTCGC
GCGCGCCCATCATCGTCCAATACCTCTTCTTCCTGAGCCTGAATGCGCTG
GCGACTCTTGCCCACCACCTTACCATCCGTCTTCTGGCATCGATCCTGGC
CCCAACGCCCCGCGGATATATTGGCTCTTCTCAGCATGGCAATGCGACAG
AGGCGCCTATCTTCTCCAATCCCTCCACACCCATACTCCCATCATTCCCG
TCGCAGACCAACAACAGCCAAACGCAGCTCTCGCCTACGCCAGCATCGAC
ACTGAGTCCGCCGAAGCTTACCCCACAAGGCTCCTCCAACGATGTATCAA
CAGTAGCGAGCGCTTCAGGCAGTGACATCCACCACCTCCCTCCTACAACC
CCACAAGGATCTTTCACCACCCTCCCACCACCTCTCCGACGTGCCTCCAC
CGCCCCAGCACAAAGCATCAGACCCCTTCCGCCCCCCTCACCAGCCAGCC
CAACCGCTATCAGCACCGCCTTGCTTGTCAGCAGTTGCGCGAAGCTCTTC
CCCATCCTTCTGGTCATATGGGGCCCGGACGGCAGCGGAAATGCGTCCAA
TGTTTCCGGCTCTAACAATACTTTGCTCAGCGCCGGTAGCCAGACAACCG
TCATGCAGCAGACATTGGATGGCAGCGGCCTCGCTCCCACGGCGACCCTC
ACCGCAGCTCACCCGACTGCCACGGGGACTTCGTCTCTGCCTGGTTCGTC
CTCGCTGCTGGAAAGTCTTCTCAGGATTATGCCCGAGTCTGTACCTACCA
GCTATCTGGCTAGCTTTATTGACCTGCTTGGACCGCTACTCTCTCTGGGC
GCGGCGGACACGCATCTCGTGCTGCTAAGCAACATCGAAGCATTGTATAT
CCTGCTTGGGTGCGGGTACCTGCGCGCGGTGGCATTAGCAGTGGCAGGGT
TGGCTGCTCGGTGGACTGTACAGAGGGTGATATTGGGGGCAGTTGGAGTT
GGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0032366intracellular sterol transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_54485CAN33_54485Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54485-T1.exon1CAN33_54485-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_54485-T1.exon2CAN33_54485-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_54485-T1.exon3CAN33_54485-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54485-T1.cdsCAN33_54485-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54485-T1CAN33_54485-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007290
DBxrefPFAM:PF04161
ProductArv1-like family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2854271..2855689 +
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