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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:3067719..3071033- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_54820-T1 ID=CAN33_54820-T1|Name=CAN33_54820-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=3315bp|location=Sequence derived from alignment at NKJJ01000020.1:3067719..3071033- (Aspergillus niger FDAARGOS_311)
ATGGCCGGCTCGAAAGCACAAGCGGACACTGCAGATATATCATTAGGTCG
GAAACGTGCCCAAGATGAGCCAGATCCAGACCAAGATGCCTCCGAGCATC
CCGACCCCATATCCAACAGCGCGTCGACAGACCTAGCGCCAAAGAAAAGG
CAACGCCGCCAGCCCCCTTTGAAGTCACTGGTAGAGACGCCAGAGACGGA
AGACAGCGCCAGTGCTAGCTCAACCGCAGAGAAATCTCGCAAAGGAAAAC
GCAAACCCGCTCAACCGAAGCGAACTCCGTCCGCCCCATGGCCCGAGGCG
TTCAAGAGCCTCTCCCGGACACACCGCGCCCTGAACCTCGTGTATACCTT
CTGCTGCACGCGAAAGCACTTTGCCACCACATTCGGCAACATTAAGAATG
CGGTGCAGGCGCAATTGCAAGGTCAAGAGCTGACAGTGGAGGATGTTGCG
CGGGTGAAAGTCCTCGTGCCACGCGCGGTGCGCTTCGAGTATGTCGATGA
AGCCAAGCTGGAGGTCATGACGACTGGAGAGCGTGAAGCAGCACAAATAG
GCTTTGGAAGGGATACACCCGGTGATGCGGGCATGCCCACAACAAAGACG
CTCCTCTTCGAGCTGCTGGACGGAGATTTGAAGAGACAAGTGAGGCATCC
GCAGACGGGGGAGCCAACCAAGCCCGTGCGGCGCATGAAGAACGAGGATC
TGAAGATGCCGGTATACAGCCAGAAGCAGATGCTAGACTTGATCGAGAAG
CGAAACAAGAAGTTCACGGATGCAATCGATGCCTTTCTCGTCCAGTGCGA
AGACGAAGCCGTCGACCCAGTCGAGAAACTGGAGACGGAAAAGAACGCCT
GGATTCCTCAGCAGCCGGAGGAAGATACCACCATCACTGCACCCTCCACT
CTCCCACAGCAAATCCCCAAAGAACGCAAATCTATGTCAGAGATTGTGGA
GGAGATCCGCCAAATGGACTGGTACACAGCGCAGATCGTTCCCGAAGGAC
ACCGAGTCTTCGACCCCCAGCCAGCCATCTACGGCGAACTCACCTTCCCA
CTCTCCCAGAACCTAGTTAACGCCCTATACAACACCAAGAACATCACACA
ATTCTACTCCCACCAAGCAGAGGCCATCAACCACCTCCAAGCCGGCCACC
ACGTCATCGTATCCACCTCCACCAGCTCCGGCAAATCCCTCATCTACCAA
GTCCCCATGCTGCACGAACTCGAAAAGGACCCCTCCAGCCGCGGCCTATA
CATTTTTCCAACCAAAGCCCTAGCACAAGACCAACGCCGCAGCATGCAAG
AGCTCCTTCAATTCATGGACGGCCTACAAGGCACCCTAGTCGAGACCTTC
GACGGCGACACTCCAATGCCCAGCCGCAACCTCATCCGCGACGAAGCCCG
CATCATCTTCACCAACCCCGACATGCTGCACATTACCATTCTCCCCCAAG
AAGCCGCCTGGCGGACCTTTCTCCAGAACCTTAAATTCGTCGTTGTCGAC
GAACTCCACGTCTACAACGGCCTCTTCGGCACCCACGTCGCCTTCATCAT
GCGTCGTCTCCGCCGCATCTGTGCCGCCGTCGGCAACCACACCGTCCAAT
TCATCTCCTGCTCCGCCACCGTCGCTAACCCTTCCCAACACATGCGCGCC
ATCTTCGGTGTTGACCCCAACTCCATCCATCTCATCGACTCCGACGGCTC
CCCCTCCGGCCGCAAGGAATTCCTCTGCTGGAACACCCCCTACAAAGACC
CCAACGACCCCTCTTCCGGCCGCGCCGACAGCGTCACCGAAACAGCCCGC
CTCTTCTCCCAACTCATCCTGCGCGGCGCCCGTGTCATCGCGTTCTGCCG
CATCCGCAAGCTCTGCGAAGTCCTTCTCCAAGCCGTCCGCACCGAACTCA
CCTCCCTTGAGCGTCCCGAAATCGCCAACATGGTCATGGGCTACCGCGGC
GGCTACAGCCCGCAAGACCGCCGCAATATCGAGAAAGACATGTTCGAGGG
CCGTCTCCTCGGCATCGTAGCCACCAATGCCCTAGAGCTAGGAGTCGACA
TCGGCTCCCTCGACGCAGTCATCACCCTGGGCTTTCCCTACTCCATCTCC
AATCTCCGCCAACAGAGCGGCCGCGCCGGCCGACGTAACAAGGACTCCCT
GTCTATCCTCGTCGGTGACCGCTACGCCACAGACCAGCATTACATGCGTA
ACCCGGACGAACTGTTCACGAAACCAAACACAGAGCTACAAATCGACCTG
TCGAACGACCTCATCCTCGAAGCGCATCTCCAATGCGCGGCTTACGAAAA
GCCCCTTTCCCTTGCCCTCGACGAAACCTACTTCGGTCCTCAGCTCCCTT
CCCTCCTAGAAACCCGCCTCCTCCAAGATAAATACATCCCCTCCCTCTAC
CACACCCACCCGCGCTTCCTCCCCTCTCCATCCCGATCCATCGCCATCCG
CGATACCGAGGACCAGCACTTCGCCGTCATAGACACCACAAACGCCCGCA
ACACCGTCCTCGAAGAAGTCGAGGCCTCTCGCGCCTTCTTCACCATCTAC
GAGGGCGGCATCTTCCTCCACCAGGGGCAGACGTATCTCGTGCACGAACT
AAACACATCGATGTACTTCGCCCGCGTCTCCCGTGTCCATGTGGACTATA
CGACCCAGCAACGCGATTACACTGATATCGACCCCATCGAGACGGAGAAC
ATCCGTCTGCTTTCTTCCCCCACCACACCCACATCCACCTCATCCTCAGA
CTCAACCTCTACTTCACAAACCAATACCAAAAGTAACCATACCACCGTAA
GTAAAGCCTACTTCGGCTCCATCCTCATCCACGCCGTGGTGTACGGCTTC
TTCAAAATCGACAAACGAGGGCGTATCCTCGACGCCGTACCGGTGGACAA
CAACCCACCGATCGACATCCACACGAAAGGCATGTGGATCGACATACCCC
CGCTAGCTCTGGAAATCCTCCAATCAAGAAACCTAAACATAGCAGCGGCG
ATACACGCAGCCGAGCACGCGATCTTATCACTCTTACCGACCTTCGTGGT
ATCTTCGCCCGGGGACGTGCGCACGGAATGTAAGGTTGCGAAGAAGGAGT
TGGGGAGGAAGTTACAAATGGCTGTGCAAGAGGCAGGAGGGGTAGGTGGG
CTGGATAATAAGCAGAAGAAGGAAAAGTTGCAGAAGATTCTACAGCCCCC
TGCGAGACAGCGGCCCGCGAGATTGACGTTCTACGATGCCAAGGGGGAGC
CTGTGGGTCGGGGATTGCGGCTAAGGCGTTTGAGTTTGTGGATGTGTTGT
TGGAAAGGGCTGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:3067719..3071033- >CAN33_54820-T1 ID=CAN33_54820-T1|Name=CAN33_54820-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6426bp|location=Sequence derived from alignment at NKJJ01000020.1:3067719..3071033- (Aspergillus niger FDAARGOS_311)
CCTACTTCGGCTCCATCCTCATCCACGCCGTGGTGTACGGCTTCTTCAAA
ATCGACAAACGAGGGCGTATCCTCGACGCCGTACCGGTGGACAACAACCC
ACCGATCGACATCCACACGAAAGGCATGTGGATCGACATACCCCCGCTAG
CTCTGGAAATCCTCCAATCAAGAAACCTAAACATAGCAGCGGCGATACAC
GCAGCCGAGCACGCGATCTTATCACTCTTACCGACCTTCGTGGTATCTTC
GCCCGGGGACGTGCGCACGGAATGTAAGGTTGCGAAGAAGGAGTTGGGGA
GGAAGTTACAAATGGCTGTGCAAGAGGCAGGAGGGGTAGGTGGGCTGGAT
AATAAGCAGAAGAAGGAAAAGTTGCAGAAGATTCTACAGCCCCCTGCGAG
ACAGCGGCCCGCGAGATTGACGTTCTACGATGCCAAGGGGGAGCCTGTGG
GTCGGGGATTGCGGCTAAGGCGTTTGAGTTTGTGGATGTGTTGTTGGAAA
GGGCTGTGAATGGCCGGCTCGAAAGCACAAGCGGACACTGCAGATATATC
ATTAGGTCGGAAACGTGCCCAAGATGAGCCAGATCCAGACCAAGATGCCT
CCGAGCATCCCGACCCCATATCCAACAGCGCGTCGACAGACCTAGCGCCA
AAGAAAAGGCAACGCCGCCAGCCCCCTTTGAAGTCACTGGTAGAGACGCC
AGAGACGGAAGACAGCGCCAGTGCTAGCTCAACCGCAGAGAAATCTCGCA
AAGGAAAACGCAAACCCGCTCAACCGAAGCGAACTCCGTCCGCCCCATGG
CCCGAGGCGTTCAAGAGCCTCTCCCGGACACACCGCGCCCTGAACCTCGT
GTATACCTTCTGCTGCACGCGAAAGCACTTTGCCACCACATTCGGCAACA
TTAAGAATGCGGTGCAGGCGCAATTGCAAGGTCAAGAGCTGACAGTGGAG
GATGTTGCGCGGGTGAAAGTCCTCGTGCCACGCGCGGTGCGCTTCGAGTA
TGTCGATGAAGCCAAGCTGGAGGTCATGACGACTGGAGAGCGTGAAGCAG
CACAAATAGGCTTTGGAAGGGATACACCCGGTGATGCGGGCATGCCCACA
ACAAAGACGCTCCTCTTCGAGCTGCTGGACGGAGATTTGAAGAGACAAGT
GAGGCATCCGCAGACGGGGGAGCCAACCAAGCCCGTGCGGCGCATGAAGA
ACGAGGATCTGAAGATGCCGGTATACAGCCAGAAGCAGATGCTAGACTTG
ATCGAGAAGCGAAACAAGAAGTTCACGGATGCAATCGATGCCTTTCTCGT
CCAGTGCGAAGACGAAGCCGTCGACCCAGTCGAGAAACTGGAGACGGAAA
AGAACGCCTGGATTCCTCAGCAGCCGGAGGAAGATACCACCATCACTGCA
CCCTCCACTCTCCCACAGCAAATCCCCAAAGAACGCAAATCTATGTCAGA
GATTGTGGAGGAGATCCGCCAAATGGACTGGTACACAGCGCAGATCGTTC
CCGAAGGACACCGAGTCTTCGACCCCCAGCCAGCCATCTACGGCGAACTC
ACCTTCCCACTCTCCCAGAACCTAGTTAACGCCCTATACAACACCAAGAA
CATCACACAATTCTACTCCCACCAAGCAGAGGCCATCAACCACCTCCAAG
CCGGCCACCACGTCATCGTATCCACCTCCACCAGCTCCGGCAAATCCCTC
ATCTACCAAGTCCCCATGCTGCACGAACTCGAAAAGGACCCCTCCAGCCG
CGGCCTATACATTTTTCCAACCAAAGCCCTAGCACAAGACCAACGCCGCA
GCATGCAAGAGCTCCTTCAATTCATGGACGGCCTACAAGGCACCCTAGTC
GAGACCTTCGACGGCGACACTCCAATGCCCAGCCGCAACCTCATCCGCGA
CGAAGCCCGCATCATCTTCACCAACCCCGACATGCTGCACATTACCATTC
TCCCCCAAGAAGCCGCCTGGCGGACCTTTCTCCAGAACCTTAAATTCGTC
GTTGTCGACGAACTCCACGTCTACAACGGCCTCTTCGGCACCCACGTCGC
CTTCATCATGCGTCGTCTCCGCCGCATCTGTGCCGCCGTCGGCAACCACA
CCGTCCAATTCATCTCCTGCTCCGCCACCGTCGCTAACCCTTCCCAACAC
ATGCGCGCCATCTTCGGTGTTGACCCCAACTCCATCCATCTCATCGACTC
CGACGGCTCCCCCTCCGGCCGCAAGGAATTCCTCTGCTGGAACACCCCCT
ACAAAGACCCCAACGACCCCTCTTCCGGCCGCGCCGACAGCGTCACCGAA
ACAGCCCGCCTCTTCTCCCAACTCATCCTGCGCGGCGCCCGTGTCATCGC
GTTCTGCCGCATCCGCAAGCTCTGCGAAGTCCTTCTCCAAGCCGTCCGCA
CCGAACTCACCTCCCTTGAGCGTCCCGAAATCGCCAACATGGTCATGGGC
TACCGCGGCGGCTACAGCCCGCAAGACCGCCGCAATATCGAGAAAGACAT
GTTCGAGGGCCGTCTCCTCGGCATCGTAGCCACCAATGCCCTAGAGCTAG
GAGTCGACATCGGCTCCCTCGACGCAGTCATCACCCTGGGCTTTCCCTAC
TCCATCTCCAATCTCCGCCAACAGAGCGGCCGCGCCGGCCGACGTAACAA
GGACTCCCTGTCTATCCTCGTCGGTGACCGCTACGCCACAGACCAGCATT
ACATGCGTAACCCGGACGAACTGTTCACGAAACCAAACACAGAGCTACAA
ATCGACCTGTCGAACGACCTCATCCTCGAAGCGCATCTCCAATGCGCGGC
TTACGAAAAGCCCCTTTCCCTTGCCCTCGACGAAACCTACTTCGGTCCTC
AGCTCCCTTCCCTCCTAGAAACCCGCCTCCTCCAAGATAAATACATCCCC
TCCCTCTACCACACCCACCCGCGCTTCCTCCCCTCTCCATCCCGATCCAT
CGCCATCCGCGATACCGAGGACCAGCACTTCGCCGTCATAGACACCACAA
ACGCCCGCAACACCGTCCTCGAAGAAGTCGAGGCCTCTCGCGCCTTCTTC
ACCATCTACGAGGGCGGCATCTTCCTCCACCAGGGGCAGACGTATCTCGT
GCACGAACTAAACACATCGATGTACTTCGCCCGCGTCTCCCGTGTCCATG
TGGACTATACGACCCAGCAACGCGATTACACTGATATCGACCCCATCGAG
ACGGAGAACATCCCCTACTTCGGCTCCATCCTCATCCACGCCGTGGTGTA
CGGCTTCTTCAAAATCGACAAACGAGGGCGTATCCTCGACGCCGTACCGG
TGGACAACAACCCACCGATCGACATCCACACGAAAGGCATGTGGATCGAC
ATACCCCCGCTAGCTCTGGAAATCCTCCAATCAAGAAACCTAAACATAGC
AGCGGCGATACACGCAGCCGAGCACGCGATCTTATCACTCTTACCGACCT
TCGTGGTATCTTCGCCCGGGGACGTGCGCACGGAATGTAAGGTTGCGAAG
AAGGAGTTGGGGAGGAAGTTACAAATGGCTGTGCAAGAGGCAGGAGGGGT
AGGTGGGCTGGATAATAAGCAGAAGAAGGAAAAGTTGCAGAAGATTCTAC
AGCCCCCTGCGAGACAGCGGCCCGCGAGATTGACGTTCTACGATGCCAAG
GGGGAGCCTGTGGGTCGGGGATTGCGGCTAAGGCGTTTGAGTTTGTGGAT
GTGTTGTTGGAAAGGGCTGTGAATGGCCGGCTCGAAAGCACAAGCGGACA
CTGCAGATATATCATTAGGTCGGAAACGTGCCCAAGATGAGCCAGATCCA
GACCAAGATGCCTCCGAGCATCCCGACCCCATATCCAACAGCGCGTCGAC
AGACCTAGCGCCAAAGAAAAGGCAACGCCGCCAGCCCCCTTTGAAGTCAC
TGGTAGAGACGCCAGAGACGGAAGACAGCGCCAGTGCTAGCTCAACCGCA
GAGAAATCTCGCAAAGGAAAACGCAAACCCGCTCAACCGAAGCGAACTCC
GTCCGCCCCATGGCCCGAGGCGTTCAAGAGCCTCTCCCGGACACACCGCG
CCCTGAACCTCGTGTATACCTTCTGCTGCACGCGAAAGCACTTTGCCACC
ACATTCGGCAACATTAAGAATGCGGTGCAGGCGCAATTGCAAGGTCAAGA
GCTGACAGTGGAGGATGTTGCGCGGGTGAAAGTCCTCGTGCCACGCGCGG
TGCGCTTCGAGTATGTCGATGAAGCCAAGCTGGAGGTCATGACGACTGGA
GAGCGTGAAGCAGCACAAATAGGCTTTGGAAGGGATACACCCGGTGATGC
GGGCATGCCCACAACAAAGACGCTCCTCTTCGAGCTGCTGGACGGAGATT
TGAAGAGACAAGTGAGGCATCCGCAGACGGGGGAGCCAACCAAGCCCGTG
CGGCGCATGAAGAACGAGGATCTGAAGATGCCGGTATACAGCCAGAAGCA
GATGCTAGACTTGATCGAGAAGCGAAACAAGAAGTTCACGGATGCAATCG
ATGCCTTTCTCGTCCAGTGCGAAGACGAAGCCGTCGACCCAGTCGAGAAA
CTGGAGACGGAAAAGAACGCCTGGATTCCTCAGCAGCCGGAGGAAGATAC
CACCATCACTGCACCCTCCACTCTCCCACAGCAAATCCCCAAAGAACGCA
AATCTATGTCAGAGATTGTGGAGGAGATCCGCCAAATGGACTGGTACACA
GCGCAGATCGTTCCCGAAGGACACCGAGTCTTCGACCCCCAGCCAGCCAT
CTACGGCGAACTCACCTTCCCACTCTCCCAGAACCTAGTTAACGCCCTAT
ACAACACCAAGAACATCACACAATTCTACTCCCACCAAGCAGAGGCCATC
AACCACCTCCAAGCCGGCCACCACGTCATCGTATCCACCTCCACCAGCTC
CGGCAAATCCCTCATCTACCAAGTCCCCATGCTGCACGAACTCGAAAAGG
ACCCCTCCAGCCGCGGCCTATACATTTTTCCAACCAAAGCCCTAGCACAA
GACCAACGCCGCAGCATGCAAGAGCTCCTTCAATTCATGGACGGCCTACA
AGGCACCCTAGTCGAGACCTTCGACGGCGACACTCCAATGCCCAGCCGCA
ACCTCATCCGCGACGAAGCCCGCATCATCTTCACCAACCCCGACATGCTG
CACATTACCATTCTCCCCCAAGAAGCCGCCTGGCGGACCTTTCTCCAGAA
CCTTAAATTCGTCGTTGTCGACGAACTCCACGTCTACAACGGCCTCTTCG
GCACCCACGTCGCCTTCATCATGCGTCGTCTCCGCCGCATCTGTGCCGCC
GTCGGCAACCACACCGTCCAATTCATCTCCTGCTCCGCCACCGTCGCTAA
CCCTTCCCAACACATGCGCGCCATCTTCGGTGTTGACCCCAACTCCATCC
ATCTCATCGACTCCGACGGCTCCCCCTCCGGCCGCAAGGAATTCCTCTGC
TGGAACACCCCCTACAAAGACCCCAACGACCCCTCTTCCGGCCGCGCCGA
CAGCGTCACCGAAACAGCCCGCCTCTTCTCCCAACTCATCCTGCGCGGCG
CCCGTGTCATCGCGTTCTGCCGCATCCGCAAGCTCTGCGAAGTCCTTCTC
CAAGCCGTCCGCACCGAACTCACCTCCCTTGAGCGTCCCGAAATCGCCAA
CATGGTCATGGGCTACCGCGGCGGCTACAGCCCGCAAGACCGCCGCAATA
TCGAGAAAGACATGTTCGAGGGCCGTCTCCTCGGCATCGTAGCCACCAAT
GCCCTAGAGCTAGGAGTCGACATCGGCTCCCTCGACGCAGTCATCACCCT
GGGCTTTCCCTACTCCATCTCCAATCTCCGCCAACAGAGCGGCCGCGCCG
GCCGACGTAACAAGGACTCCCTGTCTATCCTCGTCGGTGACCGCTACGCC
ACAGACCAGCATTACATGCGTAACCCGGACGAACTGTTCACGAAACCAAA
CACAGAGCTACAAATCGACCTGTCGAACGACCTCATCCTCGAAGCGCATC
TCCAATGCGCGGCTTACGAAAAGCCCCTTTCCCTTGCCCTCGACGAAACC
TACTTCGGTCCTCAGCTCCCTTCCCTCCTAGAAACCCGCCTCCTCCAAGA
TAAATACATCCCCTCCCTCTACCACACCCACCCGCGCTTCCTCCCCTCTC
CATCCCGATCCATCGCCATCCGCGATACCGAGGACCAGCACTTCGCCGTC
ATAGACACCACAAACGCCCGCAACACCGTCCTCGAAGAAGTCGAGGCCTC
TCGCGCCTTCTTCACCATCTACGAGGGCGGCATCTTCCTCCACCAGGGGC
AGACGTATCTCGTGCACGAACTAAACACATCGATGTACTTCGCCCGCGTC
TCCCGTGTCCATGTGGACTATACGACCCAGCAACGCGATTACACTGATAT
CGACCCCATCGAGACGGAGAACATCC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260DXP |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR018973 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR001650 |
| DBxref | InterPro:IPR014939 |
| DBxref | InterPro:IPR014001 |
| DBxref | PFAM:PF04851 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF09369 |
| DBxref | PFAM:PF00270 |
| Product | DEAD/DEAH box helicase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:3067719..3071033 - |
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