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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:3165496..3166397- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_54920-T1 ID=CAN33_54920-T1|Name=CAN33_54920-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=902bp|location=Sequence derived from alignment at NKJJ01000020.1:3165496..3166397- (Aspergillus niger FDAARGOS_311)
ATGGCAAAACTCGAACCTTTTAGCGGCGACTACTATCTATGGGACTATGT
CCCTTCCATAGCCGCCTCGATCATCTTCTTCCTCATCTACCTCGCTCTGA
CTCTATTCCATGTCTGGAAGGCCTGGATAACCCGCGCACGCTTCTGCATC
CCCTTCATCATCGGTGGATTCTGTACGTCCTTCCTCTTTTTACCTGTCCC
TGCCATCTCGTTCACCATGACCCCTAACCATATGCAATCCACGCAGTTGA
AGTAATCGGCTTCGCCGTCCGCGCCGCGTGCACCAACGCAACCGCCAACC
TAATCCTCTACATCCTGCAAAGCGTCTTCATCCTAATCGGCCCCGTTCTC
TTCTCCGCAAGCGTATACATGGTCCTAGGCCGTCTGATTCGCAGCGTCAA
CGCAGAAAAGTACTCCCTCATCCGCATCACCCGAGTAACCAAAGTCTTCG
TCACCGGCGACATCCTCTCATTCCTAGTACAGGGCCAAGGCTCAGGGTTA
ATGGCCACGGACGGCCTAGAGAACATAGCAAAAGCCATCGTGATCATTGG
ATTGATGATCCAGATCATCATGTTTGGATTCTTCATCGTCGTGGCTACGG
TCTTTGAGAAGAGGATGAAGCGCGCGCCGACGAGTCAGGCGCCGTACACG
CATCATCTGTACCCTTTGTATGCGGTTAGTTGGCTGATTATGCTCCGCTC
TATCTTTCGGGTTTTTGAGTATGCGTTGGGGCAGAAGGGCTATCTTTTGG
CGCATGAGTGGCCGCTTTTTGTGTTTGATGCGGTGCCGATGTCTGCTGTG
ATGGTTGTCTGGGGGTATTGGCATCCTGGGACGTTGAAGGCAGAGGGGGG
TCTGGGGGCGCAGCAGGAGGTGGGGATGGGCTGGTATCGGAGTATGGCAT
AG back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:3165496..3166397- >CAN33_54920-T1 ID=CAN33_54920-T1|Name=CAN33_54920-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1656bp|location=Sequence derived from alignment at NKJJ01000020.1:3165496..3166397- (Aspergillus niger FDAARGOS_311)
TTGAAGTAATCGGCTTCGCCGTCCGCGCCGCGTGCACCAACGCAACCGCC
AACCTAATCCTCTACATCCTGCAAAGCGTCTTCATCCTAATCGGCCCCGT
TCTCTTCTCCGCAAGCGTATACATGGTCCTAGGCCGTCTGATTCGCAGCG
TCAACGCAGAAAAGTACTCCCTCATCCGCATCACCCGAGTAACCAAAGTC
TTCGTCACCGGCGACATCCTCTCATTCCTAGTACAGGGCCAAGGCTCAGG
GTTAATGGCCACGGACGGCCTAGAGAACATAGCAAAAGCCATCGTGATCA
TTGGATTGATGATCCAGATCATCATGTTTGGATTCTTCATCGTCGTGGCT
ACGGTCTTTGAGAAGAGGATGAAGCGCGCGCCGACGAGTCAGGCGCCGTA
CACGCATCATCTGTACCCTTTGTATGCGGTTAGTTGGCTGATTATGCTCC
GCTCTATCTTTCGGGTTTTTGAGTATGCGTTGGGGCAGAAGGGCTATCTT
TTGGCGCATGAGTGGCCGCTTTTTGTGTTTGATGCGGTGCCGATGTCTGC
TGTGATGGTTGTCTGGGGGTATTGGCATCCTGGGACGTTGAAGGCAGAGG
GGGGTCTGGGGGCGCAGCAGGAGGTGGGGATGGGCTGGTATCGGAGTATG
GCATAGATGGCAAAACTCGAACCTTTTAGCGGCGACTACTATCTATGGGA
CTATGTCCCTTCCATAGCCGCCTCGATCATCTTCTTCCTCATCTACCTCG
CTCTGACTCTATTCCATGTCTGGAAGGCCTGGATAACCCGCGCACGCTTC
TGCATCCCCTTCATCATCGGTGGATTCTTTGAAGTAATCGGCTTCGCCGT
CCGCGCCGCGTGCACCAACGCAACCGCCAACCTAATCCTCTACATCCTGC
AAAGCGTCTTCATCCTAATCGGCCCCGTTCTCTTCTCCGCAAGCGTATAC
ATGGTCCTAGGCCGTCTGATTCGCAGCGTCAACGCAGAAAAGTACTCCCT
CATCCGCATCACCCGAGTAACCAAAGTCTTCGTCACCGGCGACATCCTCT
CATTCCTAGTACAGGGCCAAGGCTCAGGGTTAATGGCCACGGACGGCCTA
GAGAACATAGCAAAAGCCATCGTGATCATTGGATTGATGATCCAGATCAT
CATGTTTGGATTCTTCATCGTCGTGGCTACGGTCTTTGAGAAGAGGATGA
AGCGCGCGCCGACGAGTCAGGCGCCGTACACGCATCATCTGTACCCTTTG
TATGCGGTTAGTTGGCTGATTATGCTCCGCTCTATCTTTCGGGTTTTTGA
GTATGCGTTGGGGCAGAAGGGCTATCTTTTGGCGCATGAGTGGCCGCTTT
TTGTGTTTGATGCGGTGCCGATGTCTGCTGTGATGGTTGTCTGGGGGTAT
TGGCATCCTGGGACGTTGAAGGCAGAGGGGGGTCTGGGGGCGCAGCAGGA
GGTGGGGATGGGCTGGTATCGGAGTATGGCATAGATGGCAAAACTCGAAC
CTTTTAGCGGCGACTACTATCTATGGGACTATGTCCCTTCCATAGCCGCC
TCGATCATCTTCTTCCTCATCTACCTCGCTCTGACTCTATTCCATGTCTG
GAAGGCCTGGATAACCCGCGCACGCTTCTGCATCCCCTTCATCATCGGTG
GATTCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | RTA1 like protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:3165496..3166397 - |
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