|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:3467417..3468433+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_55425-T1 ID=CAN33_55425-T1|Name=CAN33_55425-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1017bp|location=Sequence derived from alignment at NKJJ01000020.1:3467417..3468433+ (Aspergillus niger FDAARGOS_311)
ATGTCTCCTCATTCATCGCTCCCAGTAGGTTCCAAGCTCTGGGTAAGCGT
TGACCTATCCTTATCATTTGGAAAAGGACACCCACAGAAGCTAACCGCAC
GAAGCTTCTCGACTCAGGAACTCTGGATATCGACGCCTCGTATGTCCTCT
CTGGTGCCAACGTCCCGAAAAGCAACCAACCGTCCCAGATCCATGACACT
CGCCAATGTCTCATGATAGCTGCCCTCCTCTACCACCCAGACTTAGGCCT
CATCCTCTTTGACACAGGCGCCTGCGAAGATATAATCAACTCCTGGGACA
AAGAATTCCTGGAGTGTGTGCCTCGCACATGGGTGAAGGACATCCATTCG
CTTCCAGCTGCAGTGAAGGCCACGGGGGCCGGAGACATCACGGATATCAA
GGCAGTGGTGATGAGCCACTTACACTTAGACCACGCTGGCGGGCTGGAAC
ATTTTTTTTTTTTTGGGGACAGGTGAGTAGTCTACTTCTCGGCCCTGCCT
CATTCTAGACTACTAGATGTGGTCGAGGCATACACTCGCTCTCATAGCAA
AGAAGTGCGAAAGTTCAACCTTTTCTATAGATGTAGAGATCTGGTGTCAC
GAAAAAGAACTCAAAAACGCCTTCTGGGCCTCGGCCACAGGCCACGATAG
TGGACTGTTCCGGCCAGATTACTTACGGGCTGACCTACTGAACTGGAAGA
CGGTGTCCGAGCAGGTTGTTGAGCTCTGGTCCGGGGTCACGCTACATATG
TGTCCGGGGCATACTGAGGGATTCCTGGTAGTTGAGCTCAAGTTTCAGGT
GGCTGGGACTGTGGTGCTGACGGGGGACCTGTTCCATGTGAAAGAGAATT
ATGAGGATGGACAACCGCAGGGCTTTCTGATGAGGGACTATAATACGTGG
CATCGGAGTAGGGATTACGTGAGAAGGCTGGTGCGGCAGACAAATGCGAA
GGTTTGTCTTGGTCATGAGAAGAGTTATTTTGACAAGTTTGTCAAGAGTC
CGGAGTATTTGGTTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:3467417..3468433+ >CAN33_55425-T1 ID=CAN33_55425-T1|Name=CAN33_55425-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1989bp|location=Sequence derived from alignment at NKJJ01000020.1:3467417..3468433+ (Aspergillus niger FDAARGOS_311)
ATGTCTCCTCATTCATCGCTCCCAGTAGGTTCCAAGCTCTGGCTTCTCGA
CTCAGGAACTCTGGATATCGACGCCTCGTATGTCCTCTCTGGTGCCAACG
TCCCGAAAAGCAACCAACCGTCCCAGATCCATGACACTCGCCAATGTCTC
ATGATAGCTGCCCTCCTCTACCACCCAGACTTAGGCCTCATCCTCTTTGA
CACAGGCGCCTGCGAAGATATAATCAACTCCTGGGACAAAGAATTCCTGG
AGTGTGTGCCTCGCACATGGGTGAAGGACATCCATTCGCTTCCAGCTGCA
GTGAAGGCCACGGGGGCCGGAGACATCACGGATATCAAGGCAGTGACGGT
GTCCGAGCAGGTTGTTGAGCTCTGGTCCGGGGTCACGCTACATATGTGTC
CGGGGCATACTGAGGGATTCCTGGTAGTTGAGCTCAAGTTTCAGGTGGCT
GGGACTGTGGTGCTGACGGGGGACCTGTTCCATGTGAAAGAGAATTATGA
GGATGGACAACCGCAGGGCTTTCTGATGAGGGACTATAATACGTGGCATC
GGAGTAGGGATTACGTGAGAAGGCTGGTGCGGCAGACAAATGCGAAGGTT
TGTCTTGGTCATGAGAAGAGTTATTTTGACAAGTTTGTCAAGAGTCCGGA
GTATTTGGTTTAGATGTCTCCTCATTCATCGCTCCCAGTAGGTTCCAAGC
TCTGGCTTCTCGACTCAGGAACTCTGGATATCGACGCCTCGTATGTCCTC
TCTGGTGCCAACGTCCCGAAAAGCAACCAACCGTCCCAGATCCATGACAC
TCGCCAATGTCTCATGATAGCTGCCCTCCTCTACCACCCAGACTTAGGCC
TCATCCTCTTTGACACAGGCGCCTGCGAAGATATAATCAACTCCTGGGAC
AAAGAATTCCTGGAGTGTGTGCCTCGCACATGGGTGAAGGACATCCATTC
GCTTCCAGCTGCAGTGAAGGCCACGGGGGCCGGAGACATCACGGATATCA
AGGCAGTGACGGTGTCCGAGCAGGTTGTTGAGCTCTGGTCCGGGGTCACG
CTACATATGTGTCCGGGGCATACTGAGGGATTCCTGGTAGTTGAGCTCAA
GTTTCAGGTGGCTGGGACTGTGGTGCTGACGGGGGACCTGTTCCATGTGA
AAGAGAATTATGAGGATGGACAACCGCAGGGCTTTCTGATGAGGGACTAT
AATACGTGGCATCGGAGTAGGGATTACGTGAGAAGGCTGGTGCGGCAGAC
AAATGCGAAGGTTTGTCTTGGTCATGAGAAGAGTTATTTTGACAAGTTTG
TCAAGAGTCCGGAGTATTTGGTTTAGATGTCTCCTCATTCATCGCTCCCA
GTAGGTTCCAAGCTCTGGCTTCTCGACTCAGGAACTCTGGATATCGACGC
CTCGTATGTCCTCTCTGGTGCCAACGTCCCGAAAAGCAACCAACCGTCCC
AGATCCATGACACTCGCCAATGTCTCATGATAGCTGCCCTCCTCTACCAC
CCAGACTTAGGCCTCATCCTCTTTGACACAGGCGCCTGCGAAGATATAAT
CAACTCCTGGGACAAAGAATTCCTGGAGTGTGTGCCTCGCACATGGGTGA
AGGACATCCATTCGCTTCCAGCTGCAGTGAAGGCCACGGGGGCCGGAGAC
ATCACGGATATCAAGGCAGTGACGGTGTCCGAGCAGGTTGTTGAGCTCTG
GTCCGGGGTCACGCTACATATGTGTCCGGGGCATACTGAGGGATTCCTGG
TAGTTGAGCTCAAGTTTCAGGTGGCTGGGACTGTGGTGCTGACGGGGGAC
CTGTTCCATGTGAAAGAGAATTATGAGGATGGACAACCGCAGGGCTTTCT
GATGAGGGACTATAATACGTGGCATCGGAGTAGGGATTACGTGAGAAGGC
TGGTGCGGCAGACAAATGCGAAGGTTTGTCTTGGTCATGAGAAGAGTTAT
TTTGACAAGTTTGTCAAGAGTCCGGAGTATTTGGTTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR001279 |
| DBxref | InterPro:IPR036866 |
| DBxref | PFAM:PF00753 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:3467417..3468433 + |
|
