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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:3578932..3580235- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_55625-T1 ID=CAN33_55625-T1|Name=CAN33_55625-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1304bp|location=Sequence derived from alignment at NKJJ01000020.1:3578932..3580235- (Aspergillus niger FDAARGOS_311)
ATGAGTACAACAACAACTTCAATCGCCTCTGCCACCAGTGCTTTGGCCTC
TTCAACCCAAACATGCACCAACCCCAAACCAGGGAAGAATGGCTACCTGC
CTCCAGAAGCGTGTGACAGTATCCTGCTCTATGTTCCCTCTCTAACTGCC
GCAGTATTGTTCTGCGTGCTATACGGCCTAACCCTCATCTGCCACGGGGT
ACAAGCATATCTCTACAAGAAGGTACGTACAAGAAGCCTCTCATACAGAC
GCTTAATCCCAAGCGACTAACAACCACCTCCAGCGCTACGCCTGGGTCAT
CATGATGGGCGCAACCTGGGAACTACTCGCCTTTATATTCCGTGCTCTCC
TTACACGACAACAGAACAACTCGAATTGGGACACCGTCTACACGATCATG
TTCCTCCTTGCTCCGCTCTGTCCGTCCCCCTCTCTCCCCTCTCTCCTCTC
CCTACCCCACTAACCAACCTCACAGGGATAAACGCCTTCCTCTACATGAC
CCTCGGCCGACTCATCTACTTCTTCACTCCGGACCAACAACTCGCCGGCA
TCACCGCCCGACGCTACGGCCGACTCTTCGTCTGGCTCGACATCTTCGCC
TTCCTCGTCCAGCTCGGCGGCGCAGCCATCACCACCGAGACGGGTGTACC
GACCAGCAGAATCATGCTAGGCGTACATATATACATGGGTGGAATTGGAT
TGCAGGAGTTATTCGTCCTGATCTTCACTGGATTGGTCATCCATCTCCAT
CGGAAACTCATCCACTATGAACAGGCGGGGATTTTGAGTCCAGGCGGTGT
GGTAGGCATGAGCATGAGCAGACATAAGCCCCTCCCGTGGCGGTGGCTAT
TCTATGTGATGTATTCTGCGCTGGGGATGATTACCGTACGTCTTCCCTTT
ATCCTTTTACTCTTTCTCAGAGAATTTTACTAATGATCGGACGGTACAGA
TACGTATCATCTTCCGACTGTGCCAATACGCACAAGGCACGGATCCGAAT
AACCCCGTCCTGACGCATGAAGCATACGAATATGTCTTTGATGCGGTGCC
GATGTTCATTGCGCTGGCGTTGTTGAATGTGGTGCATCCGGGGCGGGTGT
TGCAGGGCCCGGAGTCGGAGTTTCCGAGGGTGAGTCGGGCGGAGAAGAAG
AGGCTGAAGAGGGAGAAGAAACAGTTGAAGAGGGAGAGGAAGGAGGCGAA
GAGAATGGAGAAGGAGATGAGGAAGGGAGGGAAGGGTGGGTGGTGGTGGA
AACGGGGGAGGGAGAGTGAGGCGTTTGAGATTATTCCGATGCAGGAGGAG
GTAG back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:3578932..3580235- >CAN33_55625-T1 ID=CAN33_55625-T1|Name=CAN33_55625-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4590bp|location=Sequence derived from alignment at NKJJ01000020.1:3578932..3580235- (Aspergillus niger FDAARGOS_311)
GTAGATACGTATCATCTTCCGACTGTGCCAATACGCACAAGGCACGGATC
CGAATAACCCCGTCCTGACGCATGAAGCATACGAATATGTCTTTGATGCG
GTGCCGATGTTCATTGCGCTGGCGTTGTTGAATGTGGTGCATCCGGGGCG
GGTGTTGCAGGGCCCGGAGTCGGAGTTTCCGAGGGTGAGTCGGGCGGAGA
AGAAGAGGCTGAAGAGGGAGAAGAAACAGGATAAACGCCTTCCTCTACAT
GACCCTCGGCCGACTCATCTACTTCTTCACTCCGGACCAACAACTCGCCG
GCATCACCGCCCGACGCTACGGCCGACTCTTCGTCTGGCTCGACATCTTC
GCCTTCCTCGTCCAGCTCGGCGGCGCAGCCATCACCACCGAGACGGGTGT
ACCGACCAGCAGAATCATGCTAGGCGTACATATATACATGGGTGGAATTG
GATTGCAGGAGTTATTCGTCCTGATCTTCACTGGATTGGTCATCCATCTC
CATCGGAAACTCATCCACTATGAACAGGCGGGGATTTTGAGTCCAGGCGG
TGTGGTAGGCATGAGCATGAGCAGACATAAGCCCCTCCCGTGGCGGTGGC
TATTCTATGTGATGTATTCTGCGCTGGGGATGATTACCCGCTACGCCTGG
GTCATCATGATGGGCGCAACCTGGGAACTACTCGCCTTTATATTCCATGA
GTACAACAACAACTTCAATCGCCTCTGCCACCAGTGCTTTGGCCTCTTCA
ACCCAAACATGCACCAACCCCAAACCAGGGAAGAATGGCTACCTGCCTCC
AGAAGCGTGTGACAGTATCCTGCTCTATGTTCCCTCTCTAACTGCCGCAG
TATTGTTCTGCGTGCTATACGGCCTAACCCTCATCTGCCACGGGGTACAA
GCATATCTCTACAAGAAGGTAGATACGTATCATCTTCCGACTGTGCCAAT
ACGCACAAGGCACGGATCCGAATAACCCCGTCCTGACGCATGAAGCATAC
GAATATGTCTTTGATGCGGTGCCGATGTTCATTGCGCTGGCGTTGTTGAA
TGTGGTGCATCCGGGGCGGGTGTTGCAGGGCCCGGAGTCGGAGTTTCCGA
GGGTGAGTCGGGCGGAGAAGAAGAGGCTGAAGAGGGAGAAGAAACAGGAT
AAACGCCTTCCTCTACATGACCCTCGGCCGACTCATCTACTTCTTCACTC
CGGACCAACAACTCGCCGGCATCACCGCCCGACGCTACGGCCGACTCTTC
GTCTGGCTCGACATCTTCGCCTTCCTCGTCCAGCTCGGCGGCGCAGCCAT
CACCACCGAGACGGGTGTACCGACCAGCAGAATCATGCTAGGCGTACATA
TATACATGGGTGGAATTGGATTGCAGGAGTTATTCGTCCTGATCTTCACT
GGATTGGTCATCCATCTCCATCGGAAACTCATCCACTATGAACAGGCGGG
GATTTTGAGTCCAGGCGGTGTGGTAGGCATGAGCATGAGCAGACATAAGC
CCCTCCCGTGGCGGTGGCTATTCTATGTGATGTATTCTGCGCTGGGGATG
ATTACCCGCTACGCCTGGGTCATCATGATGGGCGCAACCTGGGAACTACT
CGCCTTTATATTCCATGAGTACAACAACAACTTCAATCGCCTCTGCCACC
AGTGCTTTGGCCTCTTCAACCCAAACATGCACCAACCCCAAACCAGGGAA
GAATGGCTACCTGCCTCCAGAAGCGTGTGACAGTATCCTGCTCTATGTTC
CCTCTCTAACTGCCGCAGTATTGTTCTGCGTGCTATACGGCCTAACCCTC
ATCTGCCACGGGGTACAAGCATATCTCTACAAGAAGGTAGATACGTATCA
TCTTCCGACTGTGCCAATACGCACAAGGCACGGATCCGAATAACCCCGTC
CTGACGCATGAAGCATACGAATATGTCTTTGATGCGGTGCCGATGTTCAT
TGCGCTGGCGTTGTTGAATGTGGTGCATCCGGGGCGGGTGTTGCAGGGCC
CGGAGTCGGAGTTTCCGAGGGTGAGTCGGGCGGAGAAGAAGAGGCTGAAG
AGGGAGAAGAAACAGGATAAACGCCTTCCTCTACATGACCCTCGGCCGAC
TCATCTACTTCTTCACTCCGGACCAACAACTCGCCGGCATCACCGCCCGA
CGCTACGGCCGACTCTTCGTCTGGCTCGACATCTTCGCCTTCCTCGTCCA
GCTCGGCGGCGCAGCCATCACCACCGAGACGGGTGTACCGACCAGCAGAA
TCATGCTAGGCGTACATATATACATGGGTGGAATTGGATTGCAGGAGTTA
TTCGTCCTGATCTTCACTGGATTGGTCATCCATCTCCATCGGAAACTCAT
CCACTATGAACAGGCGGGGATTTTGAGTCCAGGCGGTGTGGTAGGCATGA
GCATGAGCAGACATAAGCCCCTCCCGTGGCGGTGGCTATTCTATGTGATG
TATTCTGCGCTGGGGATGATTACCCGCTACGCCTGGGTCATCATGATGGG
CGCAACCTGGGAACTACTCGCCTTTATATTCCATGAGTACAACAACAACT
TCAATCGCCTCTGCCACCAGTGCTTTGGCCTCTTCAACCCAAACATGCAC
CAACCCCAAACCAGGGAAGAATGGCTACCTGCCTCCAGAAGCGTGTGACA
GTATCCTGCTCTATGTTCCCTCTCTAACTGCCGCAGTATTGTTCTGCGTG
CTATACGGCCTAACCCTCATCTGCCACGGGGTACAAGCATATCTCTACAA
GAAGGTAGATACGTATCATCTTCCGACTGTGCCAATACGCACAAGGCACG
GATCCGAATAACCCCGTCCTGACGCATGAAGCATACGAATATGTCTTTGA
TGCGGTGCCGATGTTCATTGCGCTGGCGTTGTTGAATGTGGTGCATCCGG
GGCGGGTGTTGCAGGGCCCGGAGTCGGAGTTTCCGAGGGTGAGTCGGGCG
GAGAAGAAGAGGCTGAAGAGGGAGAAGAAACAGGATAAACGCCTTCCTCT
ACATGACCCTCGGCCGACTCATCTACTTCTTCACTCCGGACCAACAACTC
GCCGGCATCACCGCCCGACGCTACGGCCGACTCTTCGTCTGGCTCGACAT
CTTCGCCTTCCTCGTCCAGCTCGGCGGCGCAGCCATCACCACCGAGACGG
GTGTACCGACCAGCAGAATCATGCTAGGCGTACATATATACATGGGTGGA
ATTGGATTGCAGGAGTTATTCGTCCTGATCTTCACTGGATTGGTCATCCA
TCTCCATCGGAAACTCATCCACTATGAACAGGCGGGGATTTTGAGTCCAG
GCGGTGTGGTAGGCATGAGCATGAGCAGACATAAGCCCCTCCCGTGGCGG
TGGCTATTCTATGTGATGTATTCTGCGCTGGGGATGATTACCCGCTACGC
CTGGGTCATCATGATGGGCGCAACCTGGGAACTACTCGCCTTTATATTCC
ATGAGTACAACAACAACTTCAATCGCCTCTGCCACCAGTGCTTTGGCCTC
TTCAACCCAAACATGCACCAACCCCAAACCAGGGAAGAATGGCTACCTGC
CTCCAGAAGCGTGTGACAGTATCCTGCTCTATGTTCCCTCTCTAACTGCC
GCAGTATTGTTCTGCGTGCTATACGGCCTAACCCTCATCTGCCACGGGGT
ACAAGCATATCTCTACAAGAAGGTAGATACGTATCATCTTCCGACTGTGC
CAATACGCACAAGGCACGGATCCGAATAACCCCGTCCTGACGCATGAAGC
ATACGAATATGTCTTTGATGCGGTGCCGATGTTCATTGCGCTGGCGTTGT
TGAATGTGGTGCATCCGGGGCGGGTGTTGCAGGGCCCGGAGTCGGAGTTT
CCGAGGGTGAGTCGGGCGGAGAAGAAGAGGCTGAAGAGGGAGAAGAAACA
GGATAAACGCCTTCCTCTACATGACCCTCGGCCGACTCATCTACTTCTTC
ACTCCGGACCAACAACTCGCCGGCATCACCGCCCGACGCTACGGCCGACT
CTTCGTCTGGCTCGACATCTTCGCCTTCCTCGTCCAGCTCGGCGGCGCAG
CCATCACCACCGAGACGGGTGTACCGACCAGCAGAATCATGCTAGGCGTA
CATATATACATGGGTGGAATTGGATTGCAGGAGTTATTCGTCCTGATCTT
CACTGGATTGGTCATCCATCTCCATCGGAAACTCATCCACTATGAACAGG
CGGGGATTTTGAGTCCAGGCGGTGTGGTAGGCATGAGCATGAGCAGACAT
AAGCCCCTCCCGTGGCGGTGGCTATTCTATGTGATGTATTCTGCGCTGGG
GATGATTACCCGCTACGCCTGGGTCATCATGATGGGCGCAACCTGGGAAC
TACTCGCCTTTATATTCCATGAGTACAACAACAACTTCAATCGCCTCTGC
CACCAGTGCTTTGGCCTCTTCAACCCAAACATGCACCAACCCCAAACCAG
GGAAGAATGGCTACCTGCCTCCAGAAGCGTGTGACAGTATCCTGCTCTAT
GTTCCCTCTCTAACTGCCGCAGTATTGTTCTGCGTGCTATACGGCCTAAC
CCTCATCTGCCACGGGGTACAAGCATATCTCTACAAGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000201.8 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | RTA1 like protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:3578932..3580235 - |
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