You are here

CAN33_55635-T1, CAN33_55635-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_55635-T1
Unique NameCAN33_55635-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:3585537..3586347-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_55635-T1 ID=CAN33_55635-T1|Name=CAN33_55635-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=811bp|location=Sequence derived from alignment at NKJJ01000020.1:3585537..3586347- (Aspergillus niger FDAARGOS_311)
ATGGCTCTTCCTGTGGACATCGACAGCATTTCTCTGACGCAGCAGCTGAG TTCACCACCCAAAGCATCATTGCAAATACTCGGGACGCACAGTGTCAACC AAGACAACAACTTCATTGATTTCGATATCTGGGTTGACTGCACGAAAATA TACGGAATCGAATCTGCCAAGTTCCTGACAGACAGAGAAGTTGAATCTCG CTCTTGGAGCTACTCGGCTGACCACGATAACGGCGACCCCAAAGTTATAT TGGGCGGATGGCTTGATGATTGGTTAAATTATAATAATACGGACGATCGA AGGTCAGTTCGGTTGATGACTTGGCCCCAATTGTCTTGTCCTATACTGAC AGAACATGTCGGTTTCCAGCTGGGCTCTTTGGAAATCAGGTCATTTCCCC GATGAGGATTGCACTGCCCTGGAAGGTCATCTCGAGCGCCTGGCACGGAA GACTGCCTACGGCGGGACTGTAGAGGTGTTGTTCCATACCCCCTCAACGG AATTCGAAGCAGGAAAGAATGCCTCGAATGAGAACACAAACATTGCAAAT ATTTATGTGCATTGGACCTTTGAGTGCCCTTTCACACCGATCGATCAGGT GTGGAGCGAGCTGGTCATGAACGCGATGGTGGACCATAAGAAGGGCTGGA TCGAGCCGCATCTACCGAAGCCCTCACACGGGATGTCTCCTTTTCGGAGG GCAATGAGAGCCAACGGTACTTCCCGTATTGTATCGCAAGAGCAGGATTC TAATGAAGTAACGCGCTCGGTACGGCAGTTCTCATCATGGGGTTGTGACG CCTCAGTGTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:3585537..3586347-

>CAN33_55635-T1 ID=CAN33_55635-T1|Name=CAN33_55635-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1488bp|location=Sequence derived from alignment at NKJJ01000020.1:3585537..3586347- (Aspergillus niger FDAARGOS_311)
CTGGGCTCTTTGGAAATCAGGTCATTTCCCCGATGAGGATTGCACTGCCC
TGGAAGGTCATCTCGAGCGCCTGGCACGGAAGACTGCCTACGGCGGGACT
GTAGAGGTGTTGTTCCATACCCCCTCAACGGAATTCGAAGCAGGAAAGAA
TGCCTCGAATGAGAACACAAACATTGCAAATATTTATGTGCATTGGACCT
TTGAGTGCCCTTTCACACCGATCGATCAGGTGTGGAGCGAGCTGGTCATG
AACGCGATGGTGGACCATAAGAAGGGCTGGATCGAGCCGCATCTACCGAA
GCCCTCACACGGGATGTCTCCTTTTCGGAGGGCAATGAGAGCCAACGGTA
CTTCCCGTATTGTATCGCAAGAGCAGGATTCTAATGAAGTAACGCGCTCG
GTACGGCAGTTCTCATCATGGGGTTGTGACGCCTCAGTGTAAATGGCTCT
TCCTGTGGACATCGACAGCATTTCTCTGACGCAGCAGCTGAGTTCACCAC
CCAAAGCATCATTGCAAATACTCGGGACGCACAGTGTCAACCAAGACAAC
AACTTCATTGATTTCGATATCTGGGTTGACTGCACGAAAATATACGGAAT
CGAATCTGCCAAGTTCCTGACAGACAGAGAAGTTGAATCTCGCTCTTGGA
GCTACTCGGCTGACCACGATAACGGCGACCCCAAAGTTATATTGGGCGGA
TGGCTTGATGATTGGTTAAATTATAATAATACGGACGATCGAAGCTGGGC
TCTTTGGAAATCAGGTCATTTCCCCGATGAGGATTGCACTGCCCTGGAAG
GTCATCTCGAGCGCCTGGCACGGAAGACTGCCTACGGCGGGACTGTAGAG
GTGTTGTTCCATACCCCCTCAACGGAATTCGAAGCAGGAAAGAATGCCTC
GAATGAGAACACAAACATTGCAAATATTTATGTGCATTGGACCTTTGAGT
GCCCTTTCACACCGATCGATCAGGTGTGGAGCGAGCTGGTCATGAACGCG
ATGGTGGACCATAAGAAGGGCTGGATCGAGCCGCATCTACCGAAGCCCTC
ACACGGGATGTCTCCTTTTCGGAGGGCAATGAGAGCCAACGGTACTTCCC
GTATTGTATCGCAAGAGCAGGATTCTAATGAAGTAACGCGCTCGGTACGG
CAGTTCTCATCATGGGGTTGTGACGCCTCAGTGTAAATGGCTCTTCCTGT
GGACATCGACAGCATTTCTCTGACGCAGCAGCTGAGTTCACCACCCAAAG
CATCATTGCAAATACTCGGGACGCACAGTGTCAACCAAGACAACAACTTC
ATTGATTTCGATATCTGGGTTGACTGCACGAAAATATACGGAATCGAATC
TGCCAAGTTCCTGACAGACAGAGAAGTTGAATCTCGCTCTTGGAGCTACT
CGGCTGACCACGATAACGGCGACCCCAAAGTTATATTGGGCGGATGGCTT
GATGATTGGTTAAATTATAATAATACGGACGATCGAAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_55635CAN33_55635Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55635-T1CAN33_55635-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55635-T1.cdsCAN33_55635-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55635-T1.exon2CAN33_55635-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_55635-T1.exon1CAN33_55635-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000201.8
NoteEggNog:ENOG41
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:3585537..3586347 -