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CAN33_55925-T1, CAN33_55925-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_55925-T1
Unique NameCAN33_55925-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:3737307..3738523+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_55925-T1 ID=CAN33_55925-T1|Name=CAN33_55925-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1217bp|location=Sequence derived from alignment at NKJJ01000020.1:3737307..3738523+ (Aspergillus niger FDAARGOS_311)
ATGAGGCCCGATCTTCTATCTACCTTCGTGACCGTGATGGCCTTCGCGCA
TCATGCCGAAGCAGCGCAGTCTTCTATTGTCTCGGGGAGTGCTCCCGGCT
TCGCAGCGGGCGTGACGGGAGGAGGCGACGCGACCCCTGTCTATCCGACA
ACTATCGACGAGCTGAAAGAGTACCTCACCTCCTCTTCGCCTCAGAACAT
TGTTATCGAGGGTACTTTCGACTTTGTCGGTTCTGAGGGCACCAAAACTT
ATCAGGCTTGTAACATCTATGACTGCACACCGGATAATGGTGGACAGGCT
ATACTTAACACGCTTGGGGGATGCGGGGACACCTCGACATATGACGTGAC
CATCGACGTTGCAGGATACCAGGGTATCAATGTCGCATCAGACAAAACTC
TGGTCGGTAAAGGGACAGGCGCTGTGCTCAATGGCAAGGGCCTGCGGTTC
GTGGGCGTCTCCAACATCATCATTCAGAACATCGAAATCACCAACCTCAA
CCCGAAGTATGTTTGGGGAGGAGATGCTCTTACGTTCTCCGACACTAATC
AGATCTGGATCGACCATGTCACCACCTCCTCACTAGGCCGCCAGCACTAT
AGTTTTGGCCAGGAGAGTGACAACGCCATCACCATCTCCAATAGCTTCAT
CAACGGGAAGACTGACTACTCTGCTACTTGTGATGGACACACGTACTGGG
GCCTCGAGCTGGTCGGCTCCAGTGACCAAATCACCTTCTACAGTGAGTTT
CAACTGGCTGGGTCCGCATCCTGATAGTTGAACGTGCAGATAAACTAAAC
GCAAAATTAGAAAACTACGTCTACTACACCTCCGGGCGCAGTCCCGCTCT
CAGTGGCAATACACTCTTCCACGCAGTCAACAGTGTCTGGGCTGATAACA
GCGGTCACGCCATCGAAGGGACTGACAACGGCATGGGCCTTTTTGAGGGG
AACGTGTTCAACAATGTCCCCACCATTGTTCAGAGCGGCTTTGTCGGTCA
GCTATTCAGCTCCGAGTCGGCCAATCTTAGCCAATGCGAGACGTCCTTGG
GAAGAGACTGTGTGACCAATGCTTACACCAGCTCTGGTTCCTTCAGTTAT
GATGACGATGGATTCTTTGTTGACTTTGAGAACCTGCCCATTGTATCTGC
TGCATCTGCATCTTCGATTGCGAGTACTGTTCCTTCGGATGCTGGTAATA
CCCTGAGCAGCACCTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:3737307..3738523+

>CAN33_55925-T1 ID=CAN33_55925-T1|Name=CAN33_55925-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2298bp|location=Sequence derived from alignment at NKJJ01000020.1:3737307..3738523+ (Aspergillus niger FDAARGOS_311)
ATGAGGCCCGATCTTCTATCTACCTTCGTGACCGTGATGGCCTTCGCGCA
TCATGCCGAAGCAGCGCAGTCTTCTATTGTCTCGGGGAGTGCTCCCGGCT
TCGCAGCGGGCGTGACGGGAGGAGGCGACGCGACCCCTGTCTATCCGACA
ACTATCGACGAGCTGAAAGAGTACCTCACCTCCTCTTCGCCTCAGAACAT
TGTTATCGAGGGTACTTTCGACTTTGTCGGTTCTGAGGGCACCAAAACTT
ATCAGGCTTGTAACATCTATGACTGCACACCGGATAATGGTGGACAGGCT
ATACTTAACACGCTTGGGGGATGCGGGGACACCTCGACATATGACGTGAC
CATCGACGTTGCAGGATACCAGGGTATCAATGTCGCATCAGACAAAACTC
TGGTCGGTAAAGGGACAGGCGCTGTGCTCAATGGCAAGGGCCTGCGGTTC
GTGGGCGTCTCCAACATCATCATTCAGAACATCGAAATCACCAACCTCAA
CCCGAAGTATGTTTGGGGAGGAGATGCTCTTACGTTCTCCGACACTAATC
AGATCTGGATCGACCATGTCACCACCTCCTCACTAGGCCGCCAGCACTAT
AGTTTTGGCCAGGAGAGTGACAACGCCATCACCATCTCCAATAGCTTCAT
CAACGGGAAGACTGACTACTCTGCTACTTGTGATGGACACACGTACTGGG
GCCTCGAGCTGGTCGGCTCCAGTGACCAAATCACCTTCTACAAAAACTAC
GTCTACTACACCTCCGGGCGCAGTCCCGCTCTCAGTGGCAATACACTCTT
CCACGCAGTCAACAGTGTCTGGGCTGATAACAGCGGTCACGCCATCGAAG
GGACTGACAACGGCATGGGCCTTTTTGAGGGGAACGTGTTCAACAATGTC
CCCACCATTGTTCAGAGCGGCTTTGTCGGTCAGCTATTCAGCTCCGAGTC
GGCCAATCTTAGCCAATGCGAGACGTCCTTGGGAAGAGACTGTGTGACCA
ATGCTTACACCAGCTCTGGTTCCTTCAGTTATGATGACGATGGATTCTTT
GTTGACTTTGAGAACCTGCCCATTGTATCTGCTGCATCTGCATCTTCGAT
TGCGAGTACTGTTCCTTCGGATGCTGGTAATACCCTGAGCAGCACCTAAA
TGAGGCCCGATCTTCTATCTACCTTCGTGACCGTGATGGCCTTCGCGCAT
CATGCCGAAGCAGCGCAGTCTTCTATTGTCTCGGGGAGTGCTCCCGGCTT
CGCAGCGGGCGTGACGGGAGGAGGCGACGCGACCCCTGTCTATCCGACAA
CTATCGACGAGCTGAAAGAGTACCTCACCTCCTCTTCGCCTCAGAACATT
GTTATCGAGGGTACTTTCGACTTTGTCGGTTCTGAGGGCACCAAAACTTA
TCAGGCTTGTAACATCTATGACTGCACACCGGATAATGGTGGACAGGCTA
TACTTAACACGCTTGGGGGATGCGGGGACACCTCGACATATGACGTGACC
ATCGACGTTGCAGGATACCAGGGTATCAATGTCGCATCAGACAAAACTCT
GGTCGGTAAAGGGACAGGCGCTGTGCTCAATGGCAAGGGCCTGCGGTTCG
TGGGCGTCTCCAACATCATCATTCAGAACATCGAAATCACCAACCTCAAC
CCGAAGTATGTTTGGGGAGGAGATGCTCTTACGTTCTCCGACACTAATCA
GATCTGGATCGACCATGTCACCACCTCCTCACTAGGCCGCCAGCACTATA
GTTTTGGCCAGGAGAGTGACAACGCCATCACCATCTCCAATAGCTTCATC
AACGGGAAGACTGACTACTCTGCTACTTGTGATGGACACACGTACTGGGG
CCTCGAGCTGGTCGGCTCCAGTGACCAAATCACCTTCTACAAAAACTACG
TCTACTACACCTCCGGGCGCAGTCCCGCTCTCAGTGGCAATACACTCTTC
CACGCAGTCAACAGTGTCTGGGCTGATAACAGCGGTCACGCCATCGAAGG
GACTGACAACGGCATGGGCCTTTTTGAGGGGAACGTGTTCAACAATGTCC
CCACCATTGTTCAGAGCGGCTTTGTCGGTCAGCTATTCAGCTCCGAGTCG
GCCAATCTTAGCCAATGCGAGACGTCCTTGGGAAGAGACTGTGTGACCAA
TGCTTACACCAGCTCTGGTTCCTTCAGTTATGATGACGATGGATTCTTTG
TTGACTTTGAGAACCTGCCCATTGTATCTGCTGCATCTGCATCTTCGATT
GCGAGTACTGTTCCTTCGGATGCTGGTAATACCCTGAGCAGCACCTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_55925CAN33_55925Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55925-T1.exon1CAN33_55925-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_55925-T1.exon2CAN33_55925-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55925-T1.cdsCAN33_55925-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55925-T1CAN33_55925-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-21)
NoteCAZy:PL1
NoteCAZy:PL1_4
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR002022
DBxrefPFAM:PF00544
ProductPectate lyase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:3737307..3738523 +
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