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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:1266939..1269265+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_5830-T1 ID=CAN33_5830-T1|Name=CAN33_5830-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2327bp|location=Sequence derived from alignment at NKJJ01000019.1:1266939..1269265+ (Aspergillus niger FDAARGOS_311)
ATGGAGTCCCCCTCGTCCTCGCCATACGCCGGCCAGAAACGCAAAATCGC
CGACATGAGCTCCGATGAAGAGGAAGAAGAAGATTACCGCCCAACCATGG
GCTTTCGCGGTTTTGCTCGCGCGTCGTCTCGCTCTGAGTCGCCTCCTTCT
CACGGCGGGCTAGGAAGCTCTCGTCGCAATCCTCGGAACAACACCGCGCA
GTCAGCGATGAAAGGCGGAGGCAACAATGCTGGCAAAGGAATGTCCGGAG
GCAACTCCTTCGCCGCGCGCATGATGGCCAAGATGGGTTACGTCGAGGGA
CAGGGTTTGGGTTCTTCCGGTCAAGGTATCGTCAACCCGATCGAGGCCCA
GGCTCGTCCTACAGGTGCCGGTCTGGGTGCGGTCCGTGAGAAGACAAAGC
AAGCGCGAGAAGAGGAAAAGCGGGCAGCAGCTCTCCGGGGCGAGTCCGTC
GAGGATAGCTCAGATGAAGAGCGCAAGAGGCGACGGAAAAAGAAGGAGGA
GCGTAAACGAGAGGGCCGGAGCGGGACCGGGACACCAGTGGCTCGCGCGA
AGCCCCAGTTCCGAACTGCGCGCGAGATGGAAAAGGATATGGAGGGCTTG
GAAGTTCCGAACGTGCTAAAGTCGCTTATCGATGCGACCGGGAAGGACCA
GAAGGTGCTCACGTCTACAGCTGGTCTGATGACGCCGCAAACATTCGTTA
CTCAAGGCGAGGGAGAAGCCTGGAAAATCGCGCAACGTGCTCGGAACGAC
CTAGAGGCGTTTGCAGACGAGTGGAAGGGTCTGACAGAGCGGAAAAAATA
CATCGAGCTAGAGGAAGCCCAGGTCGTGGAACAACTTGATACAAATCAGC
TCAAGGTCGACCAGCTGTCTGAGCTCGTCACAGCCATCGGGCAACTAGAG
ATCTTCCAGAAGGAAGACACTCGAGCAAAGTTCGACGAAATCACCGATAA
GCTGGAGTCCATGGAGATCAAGTACCGCAGCGAGATTGATGAATACCGAC
TGCCAGAAACGGCCGTCGCAGCCATCCATCCTCTTTTCCGCCAAGCGATG
GAAGAATGGGAGCCTCTCAGGGACCCGACGTTCCTCGTATCCAACCTCCG
TCGTCTCCAGCCCCTACTCCTTCGAAAGGCCAACAACGAGCACACCCAGC
GACAATCCACCTCCCCCTATGAGACCATGATCTACACCTTATGGCTGCCC
CGCGTGCGCTCCGCCCTCCTCAACGACTGGGACGTATACGAGCCCGCCCC
AGCAACCTCCCTTATAGTCGCCTGGAAAGAGCTCCTCCCCCCTTCGTCTA
CACCAACGTCCTCGACCAACTCGTCGTACCGAAGCTCTCTAACGGCCTGA
AAGAATGGAAACCCCGAAGCAGCAGCCGCCGTCACCACAACTCATCCTCC
AACAGCTCCCGCTTCCCCTGGTGGCTCTTCACTTGGCTCCAATACCTCGA
CGAGCGGCACACCAACCCCAAGCAACCCACGGGCCTACTCTCCGACGCGA
AGCGCAAATTCCGCGTCGTCCTCGACAGCTGGGACCTCAACAAGGGGCTG
ATCAACGGCATCGAACTCTGGCGCGACGCCCTAGGCTCCGAATTCGACAT
CTGTCTCCGCAACCACCTCCTCCCCCGCCTAGGCCGCCACCTCCGCGAAG
ACTTCGAAGTCAACCCGCAAGACCAAGACCTCACGGCCCTCGAAAACGTC
CTGAAATGGAAAGACTTCTTCAAACTCAACGTCATGGGTCTTCTCCTCGT
CGCCGAATTCTTCCCGAAATGGCACAACATCCTCTACATCTGGCTCACCA
ACGACCCCAACTACGAAGAAGTCGCCGAATGGTTCACCTGGTGGCGCACC
CAAATCCCCACCGATATCAACGACCTCACTATCGTCGATGATGAATGGAA
CAAGGGTCTCCAAACTATGGACTTCGCCTCCCAACTCGGCGACCGTGCCG
CTGCTGAACTTCCTCCTCCTTCATCTACCACCGAACACCCCTCAACAACC
AAACCCACCGCCACGACAACAGCGGCAGAACAAGAAAAACAACAACAACA
ACAATCCCGCAAACCCAAAATCATCGAAGAAGTCGCCTTCAAAGATATTC
TTGAATCCTGGTGCATGGAACAAGGCCTCATCATGCTGCCGTTGCGTGAA
GCGCATCCGCAAAACGGTCAGCCTTTGTTCCGCATTACGGCTAGCGCGAC
GGGTAAGGGAGGTGTTGTGGCGTTCGTGCAGGGTGATGTGGTCTGGGTGC
AGAATAAGAAGGCTAAGGAGATGTGGGAGCCTATGGGGTTGGAGGATCAG
TTGGTGGAGAGAGCGGAGGGGAGGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:1266939..1269265+ >CAN33_5830-T1 ID=CAN33_5830-T1|Name=CAN33_5830-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6336bp|location=Sequence derived from alignment at NKJJ01000019.1:1266939..1269265+ (Aspergillus niger FDAARGOS_311)
ATGGAGTCCCCCTCGTCCTCGCCATACGCCGGCCAGAAACGCAAAATCGC
CGACATGAGCTCCGATGAAGAGGAAGAAGAAGATTACCGCCCAACCATGG
GCTTTCGCGGTTTTGCTCGCGCGTCGTCTCGCTCTGAGTCGCCTCCTTCT
CACGGCGGGCTAGGAAGCTCTCGTCGCAATCCTCGGAACAACACCGCGCA
GTCAGCGATGAAAGGCGGAGGCAACAATGCTGGCAAAGGAATGTCCGGAG
GCAACTCCTTCGCCGCGCGCATGATGGCCAAGATGGGTTACGTCGAGGGA
CAGGGTTTGGGTTCTTCCGGTCAAGGTATCGTCAACCCGATCGAGGCCCA
GGCTCGTCCTACAGGTGCCGGTCTGGGTGCGGTCCGTGAGAAGACAAAGC
AAGCGCGAGAAGAGGAAAAGCGGGCAGCAGCTCTCCGGGGCGAGTCCGTC
GAGGATAGCTCAGATGAAGAGCGCAAGAGGCGACGGAAAAAGAAGGAGGA
GCGTAAACGAGAGGGCCGGAGCGGGACCGGGACACCAGTGGCTCGCGCGA
AGCCCCAGTTCCGAACTGCGCGCGAGATGGAAAAGGATATGGAGGGCTTG
GAAGTTCCGAACGTGCTAAAGTCGCTTATCGATGCGACCGGGAAGGACCA
GAAGGTGCTCACGTCTACAGCTGGTCTGATGACGCCGCAAACATTCGTTA
CTCAAGGCGAGGGAGAAGCCTGGAAAATCGCGCAACGTGCTCGGAACGAC
CTAGAGGCGTTTGCAGACGAGTGGAAGGGTCTGACAGAGCGGAAAAAATA
CATCGAGCTAGAGGAAGCCCAGGTCGTGGAACAACTTGATACAAATCAGC
TCAAGGTCGACCAGCTGTCTGAGCTCGTCACAGCCATCGGGCAACTAGAG
ATCTTCCAGAAGGAAGACACTCGAGCAAAGTTCGACGAAATCACCGATAA
GCTGGAGTCCATGGAGATCAAGTACCGCAGCGAGATTGATGAATACCGAC
TGCCAGAAACGGCCGTCGCAGCCATCCATCCTCTTTTCCGCCAAGCGATG
GAAGAATGGGAGCCTCTCAGGGACCCGACGTTCCTCGTATCCAACCTCCG
TCGTCTCCAGCCCCTACTCCTTCGAAAGGCCAACAACGAGCACACCCAGC
GACAATCCACCTCCCCCTATGAGACCATGATCTACACCTTATGGCTGCCC
CGCGTGCGCTCCGCCCTCCTCAACGACTGGGACGTATACGAGCCCGCCCC
AGCAACCTCCCTTATAGTCGCCTGGAAAGAGCTCCTCCCCCCTTCGTCTA
CACCAACGTCCTCGACCAACTCGTCCTCCCGCTTCCCCTGGTGGCTCTTC
ACTTGGCTCCAATACCTCGACGAGCGGCACACCAACCCCAAGCAACCCAC
GGGCCTACTCTCCGACGCGAAGCGCAAATTCCGCGTCGTCCTCGACAGCT
GGGACCTCAACAAGGGGCTGATCAACGGCATCGAACTCTGGCGCGACGCC
CTAGGCTCCGAATTCGACATCTGTCTCCGCAACCACCTCCTCCCCCGCCT
AGGCCGCCACCTCCGCGAAGACTTCGAAGTCAACCCGCAAGACCAAGACC
TCACGGCCCTCGAAAACGTCCTGAAATGGAAAGACTTCTTCAAACTCAAC
GTCATGGGTCTTCTCCTCGTCGCCGAATTCTTCCCGAAATGGCACAACAT
CCTCTACATCTGGCTCACCAACGACCCCAACTACGAAGAAGTCGCCGAAT
GGTTCACCTGGTGGCGCACCCAAATCCCCACCGATATCAACGACCTCACT
ATCGTCGATGATGAATGGAACAAGGGTCTCCAAACTATGGACTTCGCCTC
CCAACTCGGCGACCAAGTCGCCTTCAAAGATATTCTTGAATCCTGGTGCA
TGGAACAAGGCCTCATCATGCTGCCGTTGCGTGAAGCGCATCCGCAAAAC
GGTCAGCCTTTGTTCCGCATTACGGCTAGCGCGACGGGTAAGGGAGGTGT
TGTGGCGTTCGTGCAGGGTGATGTGGTCTGGGTGCAGAATAAGAAGGCTA
AGGAGATGTGGGAGCCTATGGGGTTGGAGGATCAGTTGGTGGAGAGAGCG
GAGGGGAGGTAGATGGAGTCCCCCTCGTCCTCGCCATACGCCGGCCAGAA
ACGCAAAATCGCCGACATGAGCTCCGATGAAGAGGAAGAAGAAGATTACC
GCCCAACCATGGGCTTTCGCGGTTTTGCTCGCGCGTCGTCTCGCTCTGAG
TCGCCTCCTTCTCACGGCGGGCTAGGAAGCTCTCGTCGCAATCCTCGGAA
CAACACCGCGCAGTCAGCGATGAAAGGCGGAGGCAACAATGCTGGCAAAG
GAATGTCCGGAGGCAACTCCTTCGCCGCGCGCATGATGGCCAAGATGGGT
TACGTCGAGGGACAGGGTTTGGGTTCTTCCGGTCAAGGTATCGTCAACCC
GATCGAGGCCCAGGCTCGTCCTACAGGTGCCGGTCTGGGTGCGGTCCGTG
AGAAGACAAAGCAAGCGCGAGAAGAGGAAAAGCGGGCAGCAGCTCTCCGG
GGCGAGTCCGTCGAGGATAGCTCAGATGAAGAGCGCAAGAGGCGACGGAA
AAAGAAGGAGGAGCGTAAACGAGAGGGCCGGAGCGGGACCGGGACACCAG
TGGCTCGCGCGAAGCCCCAGTTCCGAACTGCGCGCGAGATGGAAAAGGAT
ATGGAGGGCTTGGAAGTTCCGAACGTGCTAAAGTCGCTTATCGATGCGAC
CGGGAAGGACCAGAAGGTGCTCACGTCTACAGCTGGTCTGATGACGCCGC
AAACATTCGTTACTCAAGGCGAGGGAGAAGCCTGGAAAATCGCGCAACGT
GCTCGGAACGACCTAGAGGCGTTTGCAGACGAGTGGAAGGGTCTGACAGA
GCGGAAAAAATACATCGAGCTAGAGGAAGCCCAGGTCGTGGAACAACTTG
ATACAAATCAGCTCAAGGTCGACCAGCTGTCTGAGCTCGTCACAGCCATC
GGGCAACTAGAGATCTTCCAGAAGGAAGACACTCGAGCAAAGTTCGACGA
AATCACCGATAAGCTGGAGTCCATGGAGATCAAGTACCGCAGCGAGATTG
ATGAATACCGACTGCCAGAAACGGCCGTCGCAGCCATCCATCCTCTTTTC
CGCCAAGCGATGGAAGAATGGGAGCCTCTCAGGGACCCGACGTTCCTCGT
ATCCAACCTCCGTCGTCTCCAGCCCCTACTCCTTCGAAAGGCCAACAACG
AGCACACCCAGCGACAATCCACCTCCCCCTATGAGACCATGATCTACACC
TTATGGCTGCCCCGCGTGCGCTCCGCCCTCCTCAACGACTGGGACGTATA
CGAGCCCGCCCCAGCAACCTCCCTTATAGTCGCCTGGAAAGAGCTCCTCC
CCCCTTCGTCTACACCAACGTCCTCGACCAACTCGTCCTCCCGCTTCCCC
TGGTGGCTCTTCACTTGGCTCCAATACCTCGACGAGCGGCACACCAACCC
CAAGCAACCCACGGGCCTACTCTCCGACGCGAAGCGCAAATTCCGCGTCG
TCCTCGACAGCTGGGACCTCAACAAGGGGCTGATCAACGGCATCGAACTC
TGGCGCGACGCCCTAGGCTCCGAATTCGACATCTGTCTCCGCAACCACCT
CCTCCCCCGCCTAGGCCGCCACCTCCGCGAAGACTTCGAAGTCAACCCGC
AAGACCAAGACCTCACGGCCCTCGAAAACGTCCTGAAATGGAAAGACTTC
TTCAAACTCAACGTCATGGGTCTTCTCCTCGTCGCCGAATTCTTCCCGAA
ATGGCACAACATCCTCTACATCTGGCTCACCAACGACCCCAACTACGAAG
AAGTCGCCGAATGGTTCACCTGGTGGCGCACCCAAATCCCCACCGATATC
AACGACCTCACTATCGTCGATGATGAATGGAACAAGGGTCTCCAAACTAT
GGACTTCGCCTCCCAACTCGGCGACCAAGTCGCCTTCAAAGATATTCTTG
AATCCTGGTGCATGGAACAAGGCCTCATCATGCTGCCGTTGCGTGAAGCG
CATCCGCAAAACGGTCAGCCTTTGTTCCGCATTACGGCTAGCGCGACGGG
TAAGGGAGGTGTTGTGGCGTTCGTGCAGGGTGATGTGGTCTGGGTGCAGA
ATAAGAAGGCTAAGGAGATGTGGGAGCCTATGGGGTTGGAGGATCAGTTG
GTGGAGAGAGCGGAGGGGAGGTAGATGGAGTCCCCCTCGTCCTCGCCATA
CGCCGGCCAGAAACGCAAAATCGCCGACATGAGCTCCGATGAAGAGGAAG
AAGAAGATTACCGCCCAACCATGGGCTTTCGCGGTTTTGCTCGCGCGTCG
TCTCGCTCTGAGTCGCCTCCTTCTCACGGCGGGCTAGGAAGCTCTCGTCG
CAATCCTCGGAACAACACCGCGCAGTCAGCGATGAAAGGCGGAGGCAACA
ATGCTGGCAAAGGAATGTCCGGAGGCAACTCCTTCGCCGCGCGCATGATG
GCCAAGATGGGTTACGTCGAGGGACAGGGTTTGGGTTCTTCCGGTCAAGG
TATCGTCAACCCGATCGAGGCCCAGGCTCGTCCTACAGGTGCCGGTCTGG
GTGCGGTCCGTGAGAAGACAAAGCAAGCGCGAGAAGAGGAAAAGCGGGCA
GCAGCTCTCCGGGGCGAGTCCGTCGAGGATAGCTCAGATGAAGAGCGCAA
GAGGCGACGGAAAAAGAAGGAGGAGCGTAAACGAGAGGGCCGGAGCGGGA
CCGGGACACCAGTGGCTCGCGCGAAGCCCCAGTTCCGAACTGCGCGCGAG
ATGGAAAAGGATATGGAGGGCTTGGAAGTTCCGAACGTGCTAAAGTCGCT
TATCGATGCGACCGGGAAGGACCAGAAGGTGCTCACGTCTACAGCTGGTC
TGATGACGCCGCAAACATTCGTTACTCAAGGCGAGGGAGAAGCCTGGAAA
ATCGCGCAACGTGCTCGGAACGACCTAGAGGCGTTTGCAGACGAGTGGAA
GGGTCTGACAGAGCGGAAAAAATACATCGAGCTAGAGGAAGCCCAGGTCG
TGGAACAACTTGATACAAATCAGCTCAAGGTCGACCAGCTGTCTGAGCTC
GTCACAGCCATCGGGCAACTAGAGATCTTCCAGAAGGAAGACACTCGAGC
AAAGTTCGACGAAATCACCGATAAGCTGGAGTCCATGGAGATCAAGTACC
GCAGCGAGATTGATGAATACCGACTGCCAGAAACGGCCGTCGCAGCCATC
CATCCTCTTTTCCGCCAAGCGATGGAAGAATGGGAGCCTCTCAGGGACCC
GACGTTCCTCGTATCCAACCTCCGTCGTCTCCAGCCCCTACTCCTTCGAA
AGGCCAACAACGAGCACACCCAGCGACAATCCACCTCCCCCTATGAGACC
ATGATCTACACCTTATGGCTGCCCCGCGTGCGCTCCGCCCTCCTCAACGA
CTGGGACGTATACGAGCCCGCCCCAGCAACCTCCCTTATAGTCGCCTGGA
AAGAGCTCCTCCCCCCTTCGTCTACACCAACGTCCTCGACCAACTCGTCC
TCCCGCTTCCCCTGGTGGCTCTTCACTTGGCTCCAATACCTCGACGAGCG
GCACACCAACCCCAAGCAACCCACGGGCCTACTCTCCGACGCGAAGCGCA
AATTCCGCGTCGTCCTCGACAGCTGGGACCTCAACAAGGGGCTGATCAAC
GGCATCGAACTCTGGCGCGACGCCCTAGGCTCCGAATTCGACATCTGTCT
CCGCAACCACCTCCTCCCCCGCCTAGGCCGCCACCTCCGCGAAGACTTCG
AAGTCAACCCGCAAGACCAAGACCTCACGGCCCTCGAAAACGTCCTGAAA
TGGAAAGACTTCTTCAAACTCAACGTCATGGGTCTTCTCCTCGTCGCCGA
ATTCTTCCCGAAATGGCACAACATCCTCTACATCTGGCTCACCAACGACC
CCAACTACGAAGAAGTCGCCGAATGGTTCACCTGGTGGCGCACCCAAATC
CCCACCGATATCAACGACCTCACTATCGTCGATGATGAATGGAACAAGGG
TCTCCAAACTATGGACTTCGCCTCCCAACTCGGCGACCAAGTCGCCTTCA
AAGATATTCTTGAATCCTGGTGCATGGAACAAGGCCTCATCATGCTGCCG
TTGCGTGAAGCGCATCCGCAAAACGGTCAGCCTTTGTTCCGCATTACGGC
TAGCGCGACGGGTAAGGGAGGTGTTGTGGCGTTCGTGCAGGGTGATGTGG
TCTGGGTGCAGAATAAGAAGGCTAAGGAGATGTGGGAGCCTATGGGGTTG
GAGGATCAGTTGGTGGAGAGAGCGGAGGGGAGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022783 |
| DBxref | InterPro:IPR000467 |
| DBxref | PFAM:PF12656 |
| DBxref | PFAM:PF01585 |
| Product | GC-rich sequence DNA-binding factor-like protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:1266939..1269265 + |
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