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CAN33_6170-T1, CAN33_6170-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_6170-T1
Unique NameCAN33_6170-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:1509764..1511959-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_6170-T1 ID=CAN33_6170-T1|Name=CAN33_6170-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2196bp|location=Sequence derived from alignment at NKJJ01000019.1:1509764..1511959- (Aspergillus niger FDAARGOS_311)
ATGTCTTACGATCGCGTCCTGCCCAAACCTCCTCTTCTACACCATGACAG
CTCTCACCATCTCCCCTTGTCACGGCCTACTAGTAACCTCCTCGAGCATA
AGATCATGAATGACGATGTCGCTAAAGTGTCTATGATGGACCGTCATCTG
GACACTGCTGCTTTAAGTGGTCATCGTCGATTCACTGACACACTGCCTCC
GGTACATCTGACCTCTCTGAATCGAAGCAAGGTAGCTCTCAACAAAGTCG
CCTCCAACGCTGCCTCTGCTATTGAAACCCCGAAGCCCACGAACTTTCTA
GCTACAAAGGCTATTCCTCTTCGTGAACGCTCATCTTTGTCAGAACGTTC
GTCGTCATCTAGTCCAATCAAGTCATCCAATGCTCCCACCCCAAGGGAGT
CGGCCACACAGTTCTGCCTCTGTCAGCCGGATCCGAAGATCCCTAGGCCT
CGAAATGGTATGCAAGCTTGAAATCTGCTCGATTTGTTTCTTGAGCTGAC
AAACAGGTTAAAGCGTTCATCTTATACCGCCAACATTACCAAGCTGCAGT
GGTCGCGCAGAACCCAGGCCTTGCCAATCCTGAAATCTCCAAAATTATTG
GGGAGCAATGGAGAGGGCTTCCACAGGAGACAAAGGATGAGTGGAAAGCA
CTGGCAGAGGTAAGTGCATGTACTGTATCTATCTTTGAGTGGACCACCTA
ACTCTTGACAGGAGGAGAAAGCTCGGCACCAACAACAATACCCGGAGTAT
CGCTATCAGCCTCGTCGCTACGGTCGGGATGGGAATCTCCGGAGCGGAGC
ATCTGGCATCAGCCATAACCCTCCAGGCTCTACAGTCTGCAGCCGATGTG
GAGGCCGTGTGATGAACCCTCCAGTATCACCGGAGACTCCTTATACACCC
AGGGCCTCCTTTTTCGGTGGAAAATCGGCACCTGGGGAGGTCTTTTCAGC
ACGCAGTAACCAGTGTCGCGCCAAAGATCTGGACCGTGCTCCTAATGTCA
TCAAGCTTATCCCCAATGGTAATGGGGAATCACGCTTGCCTCGTCAGCAT
TTTGTGGAAAGCAGAAGCCGATCACCGGATAATAAGCGCAGGCGGTTGGG
ACCGCTTGGTCCTTACGATATCCGTGAAAGAAGCCCGGATTCTTCATATC
CTGCATCTCCATACACTCCTCGCTCGGCAGTAGCAGACTCACGAGGTCTG
TACCAGCCGCTACAGCAGCCACGGCCCGGCCGAAATTTCAAGGAGTATAC
CCCGCCGGATCCCAGCTTGAAACTTCCACCGCTACAAACAGCTACTCATG
TCCCCGGAACTATCACCCCAACGACTCCATATTCGCATGATGGACCTAGC
ATCGAAGCCACCGTCATGACAATCCCGTTTCTCAACAAGATAAAGGTCTT
GGCTAAGATCTCCCCGCCCTTGACGCCGGCATACCATGATGGATCGTCGT
TCCGACGTGGGGCTGTGATAGCCGTGGATGGACAAGATCCTGTTCTTGTT
AAAATAATGGTCGAATTTTTGAACAATACATTACAGAAGGAGGGTAGGTA
TCATACCCAAATCTTCGGAGGACCTGAGATTCGGTCTCGTGAGAGCTACT
CCGAATCCGAGCAAATGGGTGATGCAACTGTCGACTACCTCAATATCATC
TCCTCATGGCACCGCATCTCCGACGAAATAGTCAGCTTCGTGAAGCCTTC
ACGAGCATCATCGGAGTCAAAGTCAGTTGACGAAGAATCCACGCCAGGAG
TGTCGCCACGGACTATTATACCCAAGACTGCTGATTTACAGATCAACTCT
CCCGAGCAATTGAGCGATAATAGCTCTGTTTCGACAGTCTCCACCGGATT
GGGTTCCATTACGATGCCCGTGCCTGTCGCACTTGTTCCCCGATACCAAC
TAACGACCGCGGATGCTTTTGCTTGCTCCGTCCCGATCGGGGATTCGTAT
GCACCACTTGACCACTGGCAGTGGATGGCATCTCTGTGGAGGGCGTGCGT
AGGACCGGACATAACCGTGTACATCCGAGAATGCGAGAAGGACGAACTAG
AGCGTCTTGGAGGCAGCCCCGTGGAAGTTCGTCTTCATGATGCACGAACC
ATTGTGGTTCGAAGACTGGCATCCTCACCAAGCGAACTGGAGGAAAAGTC
ACTTAAGAGAGTCGGCTTCGAGATTGAGGACTTTCTCACCCAATGA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:1509764..1511959-

>CAN33_6170-T1 ID=CAN33_6170-T1|Name=CAN33_6170-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6264bp|location=Sequence derived from alignment at NKJJ01000019.1:1509764..1511959- (Aspergillus niger FDAARGOS_311)
GAGGAGAAAGCTCGGCACCAACAACAATACCCGGAGTATCGCTATCAGCC
TCGTCGCTACGGTCGGGATGGGAATCTCCGGAGCGGAGCATCTGGCATCA
GCCATAACCCTCCAGGCTCTACAGTCTGCAGCCGATGTGGAGGCCGTGTG
ATGAACCCTCCAGTATCACCGGAGACTCCTTATACACCCAGGGCCTCCTT
TTTCGGTGGAAAATCGGCACCTGGGGAGGTCTTTTCAGCACGCAGTAACC
AGTGTCGCGCCAAAGATCTGGACCGTGCTCCTAATGTCATCAAGCTTATC
CCCAATGGTAATGGGGAATCACGCTTGCCTCGTCAGCATTTTGTGGAAAG
CAGAAGCCGATCACCGGATAATAAGCGCAGGCGGTTGGGACCGCTTGGTC
CTTACGATATCCGTGAAAGAAGCCCGGATTCTTCATATCCTGCATCTCCA
TACACTCCTCGCTCGGCAGTAGCAGACTCACGAGGTCTGTACCAGCCGCT
ACAGCAGCCACGGCCCGGCCGAAATTTCAAGGAGTATACCCCGCCGGATC
CCAGCTTGAAACTTCCACCGCTACAAACAGCTACTCATGTCCCCGGAACT
ATCACCCCAACGACTCCATATTCGCATGATGGACCTAGCATCGAAGCCAC
CGTCATGACAATCCCGTTTCTCAACAAGATAAAGGTCTTGGCTAAGATCT
CCCCGCCCTTGACGCCGGCATACCATGATGGATCGTCGTTCCGACGTGGG
GCTGTGATAGCCGTGGATGGACAAGATCCTGTTCTTGTTAAAATAATGGT
CGAATTTTTGAACAATACATTACAGAAGGAGGGTAGGTATCATACCCAAA
TCTTCGGAGGACCTGAGATTCGGTCTCGTGAGAGCTACTCCGAATCCGAG
CAAATGGGTGATGCAACTGTCGACTACCTCAATATCATCTCCTCATGGCA
CCGCATCTCCGACGAAATAGTCAGCTTCGTGAAGCCTTCACGAGCATCAT
CGGAGTCAAAGTCAGTTGACGAAGAATCCACGCCAGGAGTGTCGCCACGG
ACTATTATACCCAAGACTGCTGATTTACAGATCAACTCTCCCGAGCAATT
GAGCGATAATAGCTCTGTTTCGACAGTCTCCACCGGATTGGGTTCCATTA
CGATGCCCGTGCCTGTCGCACTTGTTCCCCGATACCAACTAACGACCGCG
GATGCTTTTGCTTGCTCCGTCCCGATCGGGGATTCGTATGCACCACTTGA
CCACTGGCAGTGGATGGCATCTCTGTGGAGGGCGTGCGTAGGACCGGACA
TAACCGTGTACATCCGAGAATGCGAGAAGGACGAACTAGAGCGTCTTGGA
GGCAGCCCCGTGGAAGTTCGTCTTCATGATGCACGAACCATTGTGGTTCG
AAGACTGGCATCCTCACCAAGCGAACTGGAGGAAAAGTCACTTAAGAGAG
TCGGCTTCGAGATTGAGGACTTTCTCACCCAATGACGTTCATCTTATACC
GCCAACATTACCAAGCTGCAGTGGTCGCGCAGAACCCAGGCCTTGCCAAT
CCTGAAATCTCCAAAATTATTGGGGAGCAATGGAGAGGGCTTCCACAGGA
GACAAAGGATGAGTGGAAAGCACTGGCAGAGATGTCTTACGATCGCGTCC
TGCCCAAACCTCCTCTTCTACACCATGACAGCTCTCACCATCTCCCCTTG
TCACGGCCTACTAGTAACCTCCTCGAGCATAAGATCATGAATGACGATGT
CGCTAAAGTGTCTATGATGGACCGTCATCTGGACACTGCTGCTTTAAGTG
GTCATCGTCGATTCACTGACACACTGCCTCCGGTACATCTGACCTCTCTG
AATCGAAGCAAGGTAGCTCTCAACAAAGTCGCCTCCAACGCTGCCTCTGC
TATTGAAACCCCGAAGCCCACGAACTTTCTAGCTACAAAGGCTATTCCTC
TTCGTGAACGCTCATCTTTGTCAGAACGTTCGTCGTCATCTAGTCCAATC
AAGTCATCCAATGCTCCCACCCCAAGGGAGTCGGCCACACAGTTCTGCCT
CTGTCAGCCGGATCCGAAGATCCCTAGGCCTCGAAATGGAGGAGAAAGCT
CGGCACCAACAACAATACCCGGAGTATCGCTATCAGCCTCGTCGCTACGG
TCGGGATGGGAATCTCCGGAGCGGAGCATCTGGCATCAGCCATAACCCTC
CAGGCTCTACAGTCTGCAGCCGATGTGGAGGCCGTGTGATGAACCCTCCA
GTATCACCGGAGACTCCTTATACACCCAGGGCCTCCTTTTTCGGTGGAAA
ATCGGCACCTGGGGAGGTCTTTTCAGCACGCAGTAACCAGTGTCGCGCCA
AAGATCTGGACCGTGCTCCTAATGTCATCAAGCTTATCCCCAATGGTAAT
GGGGAATCACGCTTGCCTCGTCAGCATTTTGTGGAAAGCAGAAGCCGATC
ACCGGATAATAAGCGCAGGCGGTTGGGACCGCTTGGTCCTTACGATATCC
GTGAAAGAAGCCCGGATTCTTCATATCCTGCATCTCCATACACTCCTCGC
TCGGCAGTAGCAGACTCACGAGGTCTGTACCAGCCGCTACAGCAGCCACG
GCCCGGCCGAAATTTCAAGGAGTATACCCCGCCGGATCCCAGCTTGAAAC
TTCCACCGCTACAAACAGCTACTCATGTCCCCGGAACTATCACCCCAACG
ACTCCATATTCGCATGATGGACCTAGCATCGAAGCCACCGTCATGACAAT
CCCGTTTCTCAACAAGATAAAGGTCTTGGCTAAGATCTCCCCGCCCTTGA
CGCCGGCATACCATGATGGATCGTCGTTCCGACGTGGGGCTGTGATAGCC
GTGGATGGACAAGATCCTGTTCTTGTTAAAATAATGGTCGAATTTTTGAA
CAATACATTACAGAAGGAGGGTAGGTATCATACCCAAATCTTCGGAGGAC
CTGAGATTCGGTCTCGTGAGAGCTACTCCGAATCCGAGCAAATGGGTGAT
GCAACTGTCGACTACCTCAATATCATCTCCTCATGGCACCGCATCTCCGA
CGAAATAGTCAGCTTCGTGAAGCCTTCACGAGCATCATCGGAGTCAAAGT
CAGTTGACGAAGAATCCACGCCAGGAGTGTCGCCACGGACTATTATACCC
AAGACTGCTGATTTACAGATCAACTCTCCCGAGCAATTGAGCGATAATAG
CTCTGTTTCGACAGTCTCCACCGGATTGGGTTCCATTACGATGCCCGTGC
CTGTCGCACTTGTTCCCCGATACCAACTAACGACCGCGGATGCTTTTGCT
TGCTCCGTCCCGATCGGGGATTCGTATGCACCACTTGACCACTGGCAGTG
GATGGCATCTCTGTGGAGGGCGTGCGTAGGACCGGACATAACCGTGTACA
TCCGAGAATGCGAGAAGGACGAACTAGAGCGTCTTGGAGGCAGCCCCGTG
GAAGTTCGTCTTCATGATGCACGAACCATTGTGGTTCGAAGACTGGCATC
CTCACCAAGCGAACTGGAGGAAAAGTCACTTAAGAGAGTCGGCTTCGAGA
TTGAGGACTTTCTCACCCAATGACGTTCATCTTATACCGCCAACATTACC
AAGCTGCAGTGGTCGCGCAGAACCCAGGCCTTGCCAATCCTGAAATCTCC
AAAATTATTGGGGAGCAATGGAGAGGGCTTCCACAGGAGACAAAGGATGA
GTGGAAAGCACTGGCAGAGATGTCTTACGATCGCGTCCTGCCCAAACCTC
CTCTTCTACACCATGACAGCTCTCACCATCTCCCCTTGTCACGGCCTACT
AGTAACCTCCTCGAGCATAAGATCATGAATGACGATGTCGCTAAAGTGTC
TATGATGGACCGTCATCTGGACACTGCTGCTTTAAGTGGTCATCGTCGAT
TCACTGACACACTGCCTCCGGTACATCTGACCTCTCTGAATCGAAGCAAG
GTAGCTCTCAACAAAGTCGCCTCCAACGCTGCCTCTGCTATTGAAACCCC
GAAGCCCACGAACTTTCTAGCTACAAAGGCTATTCCTCTTCGTGAACGCT
CATCTTTGTCAGAACGTTCGTCGTCATCTAGTCCAATCAAGTCATCCAAT
GCTCCCACCCCAAGGGAGTCGGCCACACAGTTCTGCCTCTGTCAGCCGGA
TCCGAAGATCCCTAGGCCTCGAAATGGAGGAGAAAGCTCGGCACCAACAA
CAATACCCGGAGTATCGCTATCAGCCTCGTCGCTACGGTCGGGATGGGAA
TCTCCGGAGCGGAGCATCTGGCATCAGCCATAACCCTCCAGGCTCTACAG
TCTGCAGCCGATGTGGAGGCCGTGTGATGAACCCTCCAGTATCACCGGAG
ACTCCTTATACACCCAGGGCCTCCTTTTTCGGTGGAAAATCGGCACCTGG
GGAGGTCTTTTCAGCACGCAGTAACCAGTGTCGCGCCAAAGATCTGGACC
GTGCTCCTAATGTCATCAAGCTTATCCCCAATGGTAATGGGGAATCACGC
TTGCCTCGTCAGCATTTTGTGGAAAGCAGAAGCCGATCACCGGATAATAA
GCGCAGGCGGTTGGGACCGCTTGGTCCTTACGATATCCGTGAAAGAAGCC
CGGATTCTTCATATCCTGCATCTCCATACACTCCTCGCTCGGCAGTAGCA
GACTCACGAGGTCTGTACCAGCCGCTACAGCAGCCACGGCCCGGCCGAAA
TTTCAAGGAGTATACCCCGCCGGATCCCAGCTTGAAACTTCCACCGCTAC
AAACAGCTACTCATGTCCCCGGAACTATCACCCCAACGACTCCATATTCG
CATGATGGACCTAGCATCGAAGCCACCGTCATGACAATCCCGTTTCTCAA
CAAGATAAAGGTCTTGGCTAAGATCTCCCCGCCCTTGACGCCGGCATACC
ATGATGGATCGTCGTTCCGACGTGGGGCTGTGATAGCCGTGGATGGACAA
GATCCTGTTCTTGTTAAAATAATGGTCGAATTTTTGAACAATACATTACA
GAAGGAGGGTAGGTATCATACCCAAATCTTCGGAGGACCTGAGATTCGGT
CTCGTGAGAGCTACTCCGAATCCGAGCAAATGGGTGATGCAACTGTCGAC
TACCTCAATATCATCTCCTCATGGCACCGCATCTCCGACGAAATAGTCAG
CTTCGTGAAGCCTTCACGAGCATCATCGGAGTCAAAGTCAGTTGACGAAG
AATCCACGCCAGGAGTGTCGCCACGGACTATTATACCCAAGACTGCTGAT
TTACAGATCAACTCTCCCGAGCAATTGAGCGATAATAGCTCTGTTTCGAC
AGTCTCCACCGGATTGGGTTCCATTACGATGCCCGTGCCTGTCGCACTTG
TTCCCCGATACCAACTAACGACCGCGGATGCTTTTGCTTGCTCCGTCCCG
ATCGGGGATTCGTATGCACCACTTGACCACTGGCAGTGGATGGCATCTCT
GTGGAGGGCGTGCGTAGGACCGGACATAACCGTGTACATCCGAGAATGCG
AGAAGGACGAACTAGAGCGTCTTGGAGGCAGCCCCGTGGAAGTTCGTCTT
CATGATGCACGAACCATTGTGGTTCGAAGACTGGCATCCTCACCAAGCGA
ACTGGAGGAAAAGTCACTTAAGAGAGTCGGCTTCGAGATTGAGGACTTTC
TCACCCAATGACGTTCATCTTATACCGCCAACATTACCAAGCTGCAGTGG
TCGCGCAGAACCCAGGCCTTGCCAATCCTGAAATCTCCAAAATTATTGGG
GAGCAATGGAGAGGGCTTCCACAGGAGACAAAGGATGAGTGGAAAGCACT
GGCAGAGATGTCTTACGATCGCGTCCTGCCCAAACCTCCTCTTCTACACC
ATGACAGCTCTCACCATCTCCCCTTGTCACGGCCTACTAGTAACCTCCTC
GAGCATAAGATCATGAATGACGATGTCGCTAAAGTGTCTATGATGGACCG
TCATCTGGACACTGCTGCTTTAAGTGGTCATCGTCGATTCACTGACACAC
TGCCTCCGGTACATCTGACCTCTCTGAATCGAAGCAAGGTAGCTCTCAAC
AAAGTCGCCTCCAACGCTGCCTCTGCTATTGAAACCCCGAAGCCCACGAA
CTTTCTAGCTACAAAGGCTATTCCTCTTCGTGAACGCTCATCTTTGTCAG
AACGTTCGTCGTCATCTAGTCCAATCAAGTCATCCAATGCTCCCACCCCA
AGGGAGTCGGCCACACAGTTCTGCCTCTGTCAGCCGGATCCGAAGATCCC
TAGGCCTCGAAATG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_6170CAN33_6170Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6170-T1CAN33_6170-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6170-T1.cdsCAN33_6170-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6170-T1.exon3CAN33_6170-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_6170-T1.exon2CAN33_6170-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_6170-T1.exon1CAN33_6170-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036910
DBxrefInterPro:IPR009071
DBxrefPFAM:PF09011
DBxrefPFAM:PF00505
ProductHMG (high mobility group) box family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:1509764..1511959 -
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