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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:1580166..1582330+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_6280-T1 ID=CAN33_6280-T1|Name=CAN33_6280-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2165bp|location=Sequence derived from alignment at NKJJ01000019.1:1580166..1582330+ (Aspergillus niger FDAARGOS_311)
ATGGCGACTCCTAATGGTTCGGGTGGGCAATTTGCCAGTGGAACGACTGC
CCCGATGTTTGCTGCCAAATTCCTGCCCCATGTTGCGTCGACAGAGGAGC
GTGAGAAACATAAGTCCAGAGTGGCTCTTGCCTTGGATATTGACCCAGCA
AGGAGGCTTCTTAAAACCTGCAAGCTTTGGCATTTGCTTGAGTCTTTACC
AAGCCCGTCATCACCAGACTTCGAGAAATATTCTCCGTTTGTTTGGAAGG
ATAATGCTTGGAGACGGGCAGAGAAATACCAGTGTAAGTGACTCCTTTGG
GGTTATAGAATATGACTGTGGGCAACAGCGATTGTGGTACTTTGTTATGA
AAGAGGTGGAGAGATCCTTTGTTTTTCAACCCAGAAGATCTATGATACCA
TATCTTTGCCACATATTCCATCATCTAATCAGTAAGGCTACCGACTAGCG
GCACTAACCCTTCATGCCTCTACCGTGAACTTGGCTTACAGCATATGTCA
ACTAACTGTTGGATTTGACTTATAGGGATGGTTGTACCAAAGGAGGGTGA
GAGGGTGGTCCCGAACCGCCCTTTTCGCATCCTGGATGCTCCCCTCCTCC
GAGACGATTTCTATTGTTCGACATTAGCATACTCATCCACGTCCGGCATA
CTTGCTGTCGGCCTTGGCCATCGAGTCTATCTATGGTCTGAGCATCTGGG
TGTGCAGCATCCGCCACTCAGTGACCAACACCCCTCAAACTACGTGACAT
CACTTGCGTTCTCCTCGGAGAACGGTGGAAAAAGCATTCTGGCCGTTGGG
AGACAGTCGGGTATGTTATCTCTTTGGAGTACATTCGATTCTGATGTCCG
TTTCGAGATAAGCCATCCAGATTCTATAACTTGTCTGGCATTCCGGCCAA
CAAAATCCCGGAGGTTATCAGAGAGACTTCGCCACCTTGAGGTCGATGTT
GAGGACCTCGCTGTAGGTGACGATCTTGGGAATATCTGGTACTACTCTGT
GGAATGGCCTGATAATGAAGAATGGGATGAATACGACTTCAATGGATCCA
TGACTTTACTCGCCAAGATTACGGCCCATACGCAGCAAATCTGCGGCATT
ACTTGGTCCCCTGAAGGGTCCTATCTTGCAACGGGAGGGAATGACAACTG
CTGCTTGCTCTTCGACCTCCATGATATTCTTCCTCCACGGGAGCACAAGC
CTTCGTCCCAGGATCACACACCACATCAGTCGCGTCAATCGGAAGGCACA
GAGTGTACAGGCACGTTTACTTGCTTTGCTGCGAGTGCTAGCAAACGGCT
TTTTCGAAGGCGCAGTCTTATTAGTCACCTACTTCCGCCCTGGGCTTTTT
CCAGCGCGAAGCCACTGTATTCTTCTCTCCTCAATCATACTGGGTCATTG
ATCTCCGGTGGTGATCGAACCGTCCTGGTCCCGTCCAACCGTCAAAGACA
TCGGCTGGTCCATGGCGCCGCGGTCAAGGCTATTGCATTTGCCCCTTGGC
AGCCGTCTCTTTTGGCTACCGGAGGCGGGTCAAACGACCGAGCCATTCAT
TTCTACCACGCCCCGACGGGCGCCTGTCTGGCCACGATCAATGTGTATGC
CCAGGTGACCAGCTTGATTTGGAGTCGTACCCGACGGGAAATTGTTGCCA
CATTCGGATTCGCACAGCCTGAGCATCCGTTCCGCATCGCAGTATTCGCC
TGGCCGAGCTGTGAGCAGATCGCCGCGATTCCTTGGGGGCCGCATGGGAG
TAGTTGGGACAGCCCTGAAAGCGACATGATTGACTGTGGGCGTGCACTCT
GCGCTGTGAGTTATCCCGGCCGTCCTCGCGACTGCGAAGACCACAGACCG
GATCAAGAAAGCCGTTCTCCCACATCGATGGTGATGCACGACCGACTAGC
TGAGCAGAGTCGGAGCGAGCCCGGCCGACGGAGCACCGTTCGGGAAGTTG
TACGACCTCGCGCCAGAGAGGGGGGTCTCTGGTGTTCGCGCACGGTGCAG
GAAGGCTGCATCATTGTGGCTTCCAGCGACCAGGGTGTCAAATTCCATGA
AGTATGGAGCGGACCTAAACGAGGCGCGGCAGTTGTGGCCGGACCTCTGG
GAGGCAGTGGCATTCTCGAAGGGCTCGAAGGGCTGGAGATCATTGGGGAC
GAAATCATCCGTTAA back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:1580166..1582330+ >CAN33_6280-T1 ID=CAN33_6280-T1|Name=CAN33_6280-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3846bp|location=Sequence derived from alignment at NKJJ01000019.1:1580166..1582330+ (Aspergillus niger FDAARGOS_311)
ATGGCGACTCCTAATGGTTCGGGTGGGCAATTTGCCAGTGGAACGACTGC
CCCGATGTTTGCTGCCAAATTCCTGCCCCATGTTGCGTCGACAGAGGAGC
GTGAGAAACATAAGTCCAGAGTGGCTCTTGCCTTGGATATTGACCCAGCA
AGGAGGCTTCTTAAAACCTGCAAGCTTTGGCATTTGCTTGAGTCTTTACC
AAGCCCGTCATCACCAGACTTCGAGAAATATTCTCCGTTTGTTTGGAAGG
ATAATGCTTGGAGACGGGCAGAGAAATACCAGTGGATGGTTGTACCAAAG
GAGGGTGAGAGGGTGGTCCCGAACCGCCCTTTTCGCATCCTGGATGCTCC
CCTCCTCCGAGACGATTTCTATTGTTCGACATTAGCATACTCATCCACGT
CCGGCATACTTGCTGTCGGCCTTGGCCATCGAGTCTATCTATGGTCTGAG
CATCTGGGTGTGCAGCATCCGCCACTCAGTGACCAACACCCCTCAAACTA
CGTGACATCACTTGCGTTCTCCTCGGAGAACGGTGGAAAAAGCATTCTGG
CCGTTGGGAGACAGTCGGGTATGTTATCTCTTTGGAGTACATTCGATTCT
GATGTCCGTTTCGAGATAAGCCATCCAGATTCTATAACTTGTCTGGCATT
CCGGCCAACAAAATCCCGGAGGTTATCAGAGAGACTTCGCCACCTTGAGG
TCGATGTTGAGGACCTCGCTGTAGGTGACGATCTTGGGAATATCTGGTAC
TACTCTGTGGAATGGCCTGATAATGAAGAATGGGATGAATACGACTTCAA
TGGATCCATGACTTTACTCGCCAAGATTACGGCCCATACGCAGCAAATCT
GCGGCATTACTTGGTCCCCTGAAGGGTCCTATCTTGCAACGGGAGGGAAT
GACAACTGCTGCTTGCTCTTCGACCTCCATGATATTCTTCCTCCACGGGA
GCACAAGCCTTCGTCCCAGGATCACACACCACATCAGTCGCGTCAATCGG
AAGGCACAGAGTGTACAGGCACGTTTACTTGCTTTGCTGCGAGTGCTAGC
AAACGGCTTTTTCGAAGGCGCAGTCTTATTAGTCACCTACTTCCGCCCTG
GGCTTTTTCCAGCGCGAAGCCACTGTATTCTTCTCTCCTCAATCATACTG
GGTCATTGATCTCCGGTGGTGATCGAACCGTCCTGGTCCCGTCCAACCGT
CAAAGACATCGGCTGGTCCATGGCGCCGCGGTCAAGGCTATTGCATTTGC
CCCTTGGCAGCCGTCTCTTTTGGCTACCGGAGGCGGGTCAAACGACCGAG
CCATTCATTTCTACCACGCCCCGACGGGCGCCTGTCTGGCCACGATCAAT
GTGTATGCCCAGGTGACCAGCTTGATTTGGAGTCGTACCCGACGGGAAAT
TGTTGCCACATTCGGATTCGCACAGCCTGAGCATCCGTTCCGCATCGCAG
TATTCGCCTGGCCGAGCTGTGAGCAGATCGCCGCGATTCCTTGGGGGCCG
CATGGGAGTAGTTGGGACAGCCCTGAAAGCGACATGATTGACTGTGGGCG
TGCACTCTGCGCTGTGAGTTATCCCGGCCGTCCTCGCGACTGCGAAGACC
ACAGACCGGATCAAGAAAGCCGTTCTCCCACATCGATGGTGATGCACGAC
CGACTAGCTGAGCAGAGTCGGAGCGAGCCCGGCCGACGGAGCACCGTTCG
GGAAGTTGTACGACCTCGCGCCAGAGAGGGGGGTCTCTGGTGTTCGCGCA
CGGTGCAGGAAGGCTGCATCATTGTGGCTTCCAGCGACCAGGGTGTCAAA
TTCCATGAAGTATGGAGCGGACCTAAACGAGGCGCGGCAGTTGTGGCCGG
ACCTCTGGGAGGCAGTGGCATTCTCGAAGGGCTCGAAGGGCTGGAGATCA
TTGGGGACGAAATCATCCGTTAAATGGCGACTCCTAATGGTTCGGGTGGG
CAATTTGCCAGTGGAACGACTGCCCCGATGTTTGCTGCCAAATTCCTGCC
CCATGTTGCGTCGACAGAGGAGCGTGAGAAACATAAGTCCAGAGTGGCTC
TTGCCTTGGATATTGACCCAGCAAGGAGGCTTCTTAAAACCTGCAAGCTT
TGGCATTTGCTTGAGTCTTTACCAAGCCCGTCATCACCAGACTTCGAGAA
ATATTCTCCGTTTGTTTGGAAGGATAATGCTTGGAGACGGGCAGAGAAAT
ACCAGTGGATGGTTGTACCAAAGGAGGGTGAGAGGGTGGTCCCGAACCGC
CCTTTTCGCATCCTGGATGCTCCCCTCCTCCGAGACGATTTCTATTGTTC
GACATTAGCATACTCATCCACGTCCGGCATACTTGCTGTCGGCCTTGGCC
ATCGAGTCTATCTATGGTCTGAGCATCTGGGTGTGCAGCATCCGCCACTC
AGTGACCAACACCCCTCAAACTACGTGACATCACTTGCGTTCTCCTCGGA
GAACGGTGGAAAAAGCATTCTGGCCGTTGGGAGACAGTCGGGTATGTTAT
CTCTTTGGAGTACATTCGATTCTGATGTCCGTTTCGAGATAAGCCATCCA
GATTCTATAACTTGTCTGGCATTCCGGCCAACAAAATCCCGGAGGTTATC
AGAGAGACTTCGCCACCTTGAGGTCGATGTTGAGGACCTCGCTGTAGGTG
ACGATCTTGGGAATATCTGGTACTACTCTGTGGAATGGCCTGATAATGAA
GAATGGGATGAATACGACTTCAATGGATCCATGACTTTACTCGCCAAGAT
TACGGCCCATACGCAGCAAATCTGCGGCATTACTTGGTCCCCTGAAGGGT
CCTATCTTGCAACGGGAGGGAATGACAACTGCTGCTTGCTCTTCGACCTC
CATGATATTCTTCCTCCACGGGAGCACAAGCCTTCGTCCCAGGATCACAC
ACCACATCAGTCGCGTCAATCGGAAGGCACAGAGTGTACAGGCACGTTTA
CTTGCTTTGCTGCGAGTGCTAGCAAACGGCTTTTTCGAAGGCGCAGTCTT
ATTAGTCACCTACTTCCGCCCTGGGCTTTTTCCAGCGCGAAGCCACTGTA
TTCTTCTCTCCTCAATCATACTGGGTCATTGATCTCCGGTGGTGATCGAA
CCGTCCTGGTCCCGTCCAACCGTCAAAGACATCGGCTGGTCCATGGCGCC
GCGGTCAAGGCTATTGCATTTGCCCCTTGGCAGCCGTCTCTTTTGGCTAC
CGGAGGCGGGTCAAACGACCGAGCCATTCATTTCTACCACGCCCCGACGG
GCGCCTGTCTGGCCACGATCAATGTGTATGCCCAGGTGACCAGCTTGATT
TGGAGTCGTACCCGACGGGAAATTGTTGCCACATTCGGATTCGCACAGCC
TGAGCATCCGTTCCGCATCGCAGTATTCGCCTGGCCGAGCTGTGAGCAGA
TCGCCGCGATTCCTTGGGGGCCGCATGGGAGTAGTTGGGACAGCCCTGAA
AGCGACATGATTGACTGTGGGCGTGCACTCTGCGCTGTGAGTTATCCCGG
CCGTCCTCGCGACTGCGAAGACCACAGACCGGATCAAGAAAGCCGTTCTC
CCACATCGATGGTGATGCACGACCGACTAGCTGAGCAGAGTCGGAGCGAG
CCCGGCCGACGGAGCACCGTTCGGGAAGTTGTACGACCTCGCGCCAGAGA
GGGGGGTCTCTGGTGTTCGCGCACGGTGCAGGAAGGCTGCATCATTGTGG
CTTCCAGCGACCAGGGTGTCAAATTCCATGAAGTATGGAGCGGACCTAAA
CGAGGCGCGGCAGTTGTGGCCGGACCTCTGGGAGGCAGTGGCATTCTCGA
AGGGCTCGAAGGGCTGGAGATCATTGGGGACGAAATCATCCGTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | PFAM:PF00400 |
| Product | WD domain G-beta repeat family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:1580166..1582330 + |
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