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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:2104042..2106331- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_6995-T1 ID=CAN33_6995-T1|Name=CAN33_6995-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2290bp|location=Sequence derived from alignment at NKJJ01000019.1:2104042..2106331- (Aspergillus niger FDAARGOS_311)
ATGGCAGGCTCAATGTCTGGTCTAAGCTCTCCTTTGATGCCATGCGACCG
CTCTGTCTCCATCCCTTGTCGGCGATACGATGCGGATGCCACCCTGTTGC
TCGTGGGGTTCGTCGGTGCCGGAAAGAAGACCCTAGGTATTATAGCATCT
GTCGCCCTGCGGCGCAGATTTATTGATTTCGATGCTGTATTTCGTCAGGA
GGTGCACTTATCTCCCCAGGAGTACATTGCACAAAATGGTCCCGCGCGAT
ACCGGGAGCTGGAGCTGAAATTGACTCGCACTCTGCTAGATAAATGCTCC
ACAGGATGTGTAATTACCATCTCGGGCGTGGGATGGTCGGCAAATCGCCA
GCAGCAGGTGCTTTTGAAGAAGTTTGCACAGAACCATCCCGTGGTGTATG
TCAGACGCGACAGGGTGGATCTTCAACAGTTCATCATGACCACTAGCCCT
GACAAGTTCAACCGGATCTTTGAAGCGGGCAATGAGTTCTTCCAGTCATG
CTCCAGCTTTGACTTTTTCAATCACACACAGGAAGACAAGTTGACAGACT
ATGCTGGTCGCCCACTCCCGGCGTATATCAAACTCAAGGAAGCTGAACGA
GTGTTCCTAAGGTTCTTGCATCAGGTCTTCGGTCGTGCTTATCATGTGCT
CTATTCTTCGGACCCGTTTTCACCGTCTCATACATATGCGCTACAGGTGC
CGCTAACCTGGCTGGACTGCAATCCGGACCTGGAACTATTGGAGAGTGGC
GCTGACGCGGTTACTATTGTGATTGACGGGGGAGTCGGTGATAATTACAA
TGCCCGATTCCTGGAAAGAATTGCCAAGCACATGGCGACGATCCGGAAGC
ATACTCGGATTCCAATATTCATCGAGATTCCGCAGTCAGATGCTAGACGC
GGTGAGCTCTTGGAGATGCTGCTTCGACTCGCACCCGATGCTGTGGCATG
TCCTGTTGACGGCTGCGAATTTAGCAGATTAAAGTTGGCTAAAGGCCACA
CTAAGATCATTGCCACCTATCAGTCCACCTCCTTGGCTAGGGACCAGAGT
ATCCTTCCTGAAATACGTTCTCTTCTGGACAATTCAGAGAAGCAAGGGTT
CGATGCCTTTCGCGTTACTATAGAGCCCAGCTTCCCAGGGGATCTCACGA
ATCTTACTTTACAGCAACGGCTGGGTGAGGTAACAGACATTCCCATAACC
GTATACCATAGTGGGCCACTCGGACGAGCATCTATATGTCTAAATCCCAT
TCTCTCGCCAGTGGTCCTCCCATCTCTTCCGGATAGTGCCACAGGGGTCA
CACTCGCATCGGCCCAGCAAGCACTTACATCCTGCTACCTGCTTCCGAAA
CAAACCTTCACCGTCTTCGGCCAAAAAGTCCAAAACAGTCTCTCACCAGC
AATGCACAATGCAGCCTACTCTGCCTGCGGTCTACCACACGCCTACAACA
TATTATGCAGTGATCACTTCTCCGACATCCACAAACTCCTAAACAGCGCA
GAGCATGGAGGAATAGCTGTAACACTACCATACAAAACGGACGTCCTCCC
ATTACTAGACGAAGTCAGCCCAGATGCCCAGGACATCCACGCCGTAAACA
CGGTGGTCATCGAGCACCGAAATAGCAGTACCAACAGCCCCTCCAAGGTC
CTTAAAGGCTACAACACAGATTATCTCGGGATCCGCGACTGCATCAACAA
ACACCTCTCTCCCGCCAATGCCATCCGACACGGCACCACAGCCTTGGTAA
TAGGCGCAGGCGGAATGGCCCGCGCAGCCATCTATGCATGCTACCAGCTC
GGCGTCCGCCAGATCTGCATCTATAACCGGACTGTTTCGAATGCGCAGAA
GCTAGCTGACTATTATACCCGGTGGGCTGAGAGGAATAATACCCATCTGA
AGATCGAGATTCTGCGATCGAGTGACGACGCCTGGCCAGAGGGCTTTCGT
CAACCGACTATTATTGTTGCGTGTTTGCCGGCGCCGGCTGGAGGGCAGTT
GAAGTCCCCTATTACGATGGAGGTGCCGGAGCAGTGGTTGAGGAGTACGA
CTGGGGGTGTTTTCATTGATGTATGTGTTCTCAAATACCCTGATTTTTTA
ATGAGAGGTGCTAACTGGACAGGTGGCGTATGGAATGCCGCAGACCAAGC
TGAGAATTGGTATGAATGAACGAGCGAGTATGGGCTGGGTCGTGGTTGAT
GGTCTGGTGGTGTTGTTGGAGCAGGGCATTGCGCAGTATGAGCTGTTTAC
AAGGAGGCCGGCGCCGGTGCATGTGATGAGGGGGTATTGA back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:2104042..2106331- >CAN33_6995-T1 ID=CAN33_6995-T1|Name=CAN33_6995-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4476bp|location=Sequence derived from alignment at NKJJ01000019.1:2104042..2106331- (Aspergillus niger FDAARGOS_311)
GTGGCGTATGGAATGCCGCAGACCAAGCTGAGAATTGGTATGAATGAACG
AGCGAGTATGGGCTGGGTCGTGGTTGATGGTCTGGTGGTGTTGTTGGAGC
AGGGCATTGCGCAGTATGAGCTGTTTACAAGGAGGCCGGCGCCGGTGCAT
GTGATGAGGGGGTATTGAATGGCAGGCTCAATGTCTGGTCTAAGCTCTCC
TTTGATGCCATGCGACCGCTCTGTCTCCATCCCTTGTCGGCGATACGATG
CGGATGCCACCCTGTTGCTCGTGGGGTTCGTCGGTGCCGGAAAGAAGACC
CTAGGTATTATAGCATCTGTCGCCCTGCGGCGCAGATTTATTGATTTCGA
TGCTGTATTTCGTCAGGAGGTGCACTTATCTCCCCAGGAGTACATTGCAC
AAAATGGTCCCGCGCGATACCGGGAGCTGGAGCTGAAATTGACTCGCACT
CTGCTAGATAAATGCTCCACAGGATGTGTAATTACCATCTCGGGCGTGGG
ATGGTCGGCAAATCGCCAGCAGCAGGTGCTTTTGAAGAAGTTTGCACAGA
ACCATCCCGTGGTGTATGTCAGACGCGACAGGGTGGATCTTCAACAGTTC
ATCATGACCACTAGCCCTGACAAGTTCAACCGGATCTTTGAAGCGGGCAA
TGAGTTCTTCCAGTCATGCTCCAGCTTTGACTTTTTCAATCACACACAGG
AAGACAAGTTGACAGACTATGCTGGTCGCCCACTCCCGGCGTATATCAAA
CTCAAGGAAGCTGAACGAGTGTTCCTAAGGTTCTTGCATCAGGTCTTCGG
TCGTGCTTATCATGTGCTCTATTCTTCGGACCCGTTTTCACCGTCTCATA
CATATGCGCTACAGGTGCCGCTAACCTGGCTGGACTGCAATCCGGACCTG
GAACTATTGGAGAGTGGCGCTGACGCGGTTACTATTGTGATTGACGGGGG
AGTCGGTGATAATTACAATGCCCGATTCCTGGAAAGAATTGCCAAGCACA
TGGCGACGATCCGGAAGCATACTCGGATTCCAATATTCATCGAGATTCCG
CAGTCAGATGCTAGACGCGGTGAGCTCTTGGAGATGCTGCTTCGACTCGC
ACCCGATGCTGTGGCATGTCCTGTTGACGGCTGCGAATTTAGCAGATTAA
AGTTGGCTAAAGGCCACACTAAGATCATTGCCACCTATCAGTCCACCTCC
TTGGCTAGGGACCAGAGTATCCTTCCTGAAATACGTTCTCTTCTGGACAA
TTCAGAGAAGCAAGGGTTCGATGCCTTTCGCGTTACTATAGAGCCCAGCT
TCCCAGGGGATCTCACGAATCTTACTTTACAGCAACGGCTGGGTGAGGTA
ACAGACATTCCCATAACCGTATACCATAGTGGGCCACTCGGACGAGCATC
TATATGTCTAAATCCCATTCTCTCGCCAGTGGTCCTCCCATCTCTTCCGG
ATAGTGCCACAGGGGTCACACTCGCATCGGCCCAGCAAGCACTTACATCC
TGCTACCTGCTTCCGAAACAAACCTTCACCGTCTTCGGCCAAAAAGTCCA
AAACAGTCTCTCACCAGCAATGCACAATGCAGCCTACTCTGCCTGCGGTC
TACCACACGCCTACAACATATTATGCAGTGATCACTTCTCCGACATCCAC
AAACTCCTAAACAGCGCAGAGCATGGAGGAATAGCTGTAACACTACCATA
CAAAACGGACGTCCTCCCATTACTAGACGAAGTCAGCCCAGATGCCCAGG
ACATCCACGCCGTAAACACGGTGGTCATCGAGCACCGAAATAGCAGTACC
AACAGCCCCTCCAAGGTCCTTAAAGGCTACAACACAGATTATCTCGGGAT
CCGCGACTGCATCAACAAACACCTCTCTCCCGCCAATGCCATCCGACACG
GCACCACAGCCTTGGTAATAGGCGCAGGCGGAATGGCCCGCGCAGCCATC
TATGCATGCTACCAGCTCGGCGTCCGCCAGATCTGCATCTATAACCGGAC
TGTTTCGAATGCGCAGAAGCTAGCTGACTATTATACCCGGTGGGCTGAGA
GGAATAATACCCATCTGAAGATCGAGATTCTGCGATCGAGTGACGACGCC
TGGCCAGAGGGCTTTCGTCAACCGACTATTATTGTTGCGTGTTTGCCGGC
GCCGGCTGGAGGGCAGTTGAAGTCCCCTATTACGATGGAGGTGCCGGAGC
AGTGGTTGAGGAGTACGACTGGGGGTGTTTTCATTGATGTGGCGTATGGA
ATGCCGCAGACCAAGCTGAGAATTGGTATGAATGAACGAGCGAGTATGGG
CTGGGTCGTGGTTGATGGTCTGGTGGTGTTGTTGGAGCAGGGCATTGCGC
AGTATGAGCTGTTTACAAGGAGGCCGGCGCCGGTGCATGTGATGAGGGGG
TATTGAATGGCAGGCTCAATGTCTGGTCTAAGCTCTCCTTTGATGCCATG
CGACCGCTCTGTCTCCATCCCTTGTCGGCGATACGATGCGGATGCCACCC
TGTTGCTCGTGGGGTTCGTCGGTGCCGGAAAGAAGACCCTAGGTATTATA
GCATCTGTCGCCCTGCGGCGCAGATTTATTGATTTCGATGCTGTATTTCG
TCAGGAGGTGCACTTATCTCCCCAGGAGTACATTGCACAAAATGGTCCCG
CGCGATACCGGGAGCTGGAGCTGAAATTGACTCGCACTCTGCTAGATAAA
TGCTCCACAGGATGTGTAATTACCATCTCGGGCGTGGGATGGTCGGCAAA
TCGCCAGCAGCAGGTGCTTTTGAAGAAGTTTGCACAGAACCATCCCGTGG
TGTATGTCAGACGCGACAGGGTGGATCTTCAACAGTTCATCATGACCACT
AGCCCTGACAAGTTCAACCGGATCTTTGAAGCGGGCAATGAGTTCTTCCA
GTCATGCTCCAGCTTTGACTTTTTCAATCACACACAGGAAGACAAGTTGA
CAGACTATGCTGGTCGCCCACTCCCGGCGTATATCAAACTCAAGGAAGCT
GAACGAGTGTTCCTAAGGTTCTTGCATCAGGTCTTCGGTCGTGCTTATCA
TGTGCTCTATTCTTCGGACCCGTTTTCACCGTCTCATACATATGCGCTAC
AGGTGCCGCTAACCTGGCTGGACTGCAATCCGGACCTGGAACTATTGGAG
AGTGGCGCTGACGCGGTTACTATTGTGATTGACGGGGGAGTCGGTGATAA
TTACAATGCCCGATTCCTGGAAAGAATTGCCAAGCACATGGCGACGATCC
GGAAGCATACTCGGATTCCAATATTCATCGAGATTCCGCAGTCAGATGCT
AGACGCGGTGAGCTCTTGGAGATGCTGCTTCGACTCGCACCCGATGCTGT
GGCATGTCCTGTTGACGGCTGCGAATTTAGCAGATTAAAGTTGGCTAAAG
GCCACACTAAGATCATTGCCACCTATCAGTCCACCTCCTTGGCTAGGGAC
CAGAGTATCCTTCCTGAAATACGTTCTCTTCTGGACAATTCAGAGAAGCA
AGGGTTCGATGCCTTTCGCGTTACTATAGAGCCCAGCTTCCCAGGGGATC
TCACGAATCTTACTTTACAGCAACGGCTGGGTGAGGTAACAGACATTCCC
ATAACCGTATACCATAGTGGGCCACTCGGACGAGCATCTATATGTCTAAA
TCCCATTCTCTCGCCAGTGGTCCTCCCATCTCTTCCGGATAGTGCCACAG
GGGTCACACTCGCATCGGCCCAGCAAGCACTTACATCCTGCTACCTGCTT
CCGAAACAAACCTTCACCGTCTTCGGCCAAAAAGTCCAAAACAGTCTCTC
ACCAGCAATGCACAATGCAGCCTACTCTGCCTGCGGTCTACCACACGCCT
ACAACATATTATGCAGTGATCACTTCTCCGACATCCACAAACTCCTAAAC
AGCGCAGAGCATGGAGGAATAGCTGTAACACTACCATACAAAACGGACGT
CCTCCCATTACTAGACGAAGTCAGCCCAGATGCCCAGGACATCCACGCCG
TAAACACGGTGGTCATCGAGCACCGAAATAGCAGTACCAACAGCCCCTCC
AAGGTCCTTAAAGGCTACAACACAGATTATCTCGGGATCCGCGACTGCAT
CAACAAACACCTCTCTCCCGCCAATGCCATCCGACACGGCACCACAGCCT
TGGTAATAGGCGCAGGCGGAATGGCCCGCGCAGCCATCTATGCATGCTAC
CAGCTCGGCGTCCGCCAGATCTGCATCTATAACCGGACTGTTTCGAATGC
GCAGAAGCTAGCTGACTATTATACCCGGTGGGCTGAGAGGAATAATACCC
ATCTGAAGATCGAGATTCTGCGATCGAGTGACGACGCCTGGCCAGAGGGC
TTTCGTCAACCGACTATTATTGTTGCGTGTTTGCCGGCGCCGGCTGGAGG
GCAGTTGAAGTCCCCTATTACGATGGAGGTGCCGGAGCAGTGGTTGAGGA
GTACGACTGGGGGTGTTTTCATTGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity |
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR006151 |
| DBxref | InterPro:IPR031322 |
| DBxref | InterPro:IPR013708 |
| DBxref | InterPro:IPR041121 |
| DBxref | InterPro:IPR013785 |
| DBxref | PFAM:PF01202 |
| DBxref | PFAM:PF08501 |
| DBxref | PFAM:PF18317 |
| Product | Shikimate dehydrogenase substrate binding domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:2104042..2106331 - |
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