You are here

Home

CAN33_7170-T1, CAN33_7170-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_7170-T1
Unique NameCAN33_7170-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:2193700..2195019-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_7170-T1 ID=CAN33_7170-T1|Name=CAN33_7170-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1320bp|location=Sequence derived from alignment at NKJJ01000019.1:2193700..2195019- (Aspergillus niger FDAARGOS_311)
ATGCCTCTTTCTAAGATCGCGGGAGTCCTGCTGGCCTCAGCTTCCCTTGT
GGCCGGACATGGTTATGTGTCGAGCATCGAGGTCGACGGCACTACTTACG
GTGGCTACCTCGTTGACACCTACTACTACGAGTCTGATCCCCCGGAGCTG
ATTGCCTGGTCCACGAATGCCACGGACGATGGCTATGTCTCTCCCACTCA
ATACGACAGCTCCAACATTGTCTGCCATCGTGGCTCCGCTCCCGGTGCCC
TCGCTGCTCCGGTTACTCCGGGTGGAACTGTCAAGATGACCTGGAACACT
TGGCCTGATGACCACCATGGCCCGGTGATCACCTACCTGGCCAACTGCAA
CGGCTCTTGCTCTGACGTCGATAAGACGGCTTTGCAGTTTTTCAAGATTG
ATGCTGGTGGCTTGATCGATGATTCCGAGATTCCTGGTACCTGGGCTACC
GACAAGCTCATCGATAATAACTACACCCGAAGCATCACCATTCCATCTGA
TATCGAGGCCGGAAACTACGTTCTTCGCCATGAGATCATTGCCCTGCACG
GTGCTGAGGACCTGGACGGCGCCCAGAACTACCCCCAGTGCATTAACCTG
AACGTCACCGGAAGCGGTACTGCCACCCCAAGCGGAACCCTGGGAACTGC
ATTGTACATGGACACCGACCCCGGAATCTACATCGACATCTGGCAGAGTA
TCAGCAGTTACACCATCCCCGGCCCGACCCTCTACACTGCTGGCAGCACT
GCCACCGCTGCTGCTTCTTCTGCGACCACCACTGCTGCAGCCACCAGCGC
CTCGACGACCGAGGCTGCTGTTGTGACCTCCGCTGCCGCGTCTTATGCTA
GTGCCGGATCCCAGACGACCATGGTCACCTCCTCTCGTCCTCAGCCCACT
GGCAGCTCCGGCAGCTCCGGCAGCTCCTCCAATGTTGGTAGCTCTGGTAG
CACCAACAAACAATCCGGCAGTGGCTCAACGGCTGGCGGACAGTTCGGTC
AAACCCAGCCTGGCATGGCAGGATCCGACAACACCAGCCCCTCCGATTCG
GCCTCTACCCCCACCAGCTCCACTCCCAGCGCTGCTTCTAGCTCCGCATC
TTCGGCTACTTCGGGCGTCTTGAGCGGCTCCTGCAGCCAGGAAGACTACT
GGTACTGCAATGGCGGCACGGCGTTCCAGCGTTGCGTCAACGGCGAGTGG
GACGCATCTCAGAGCATGGCTGCGGGCACTGAGTGCACTCCTGGGATCTC
AGAGACGCTGACCATCGCTGCATCTTCGAAGCGTCGTGATGTTAGCGGTC
TTCGCCGTCGCCGGCTGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000019.1:2193700..2195019-

>CAN33_7170-T1 ID=CAN33_7170-T1|Name=CAN33_7170-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1320bp|location=Sequence derived from alignment at NKJJ01000019.1:2193700..2195019- (Aspergillus niger FDAARGOS_311)
ATGCCTCTTTCTAAGATCGCGGGAGTCCTGCTGGCCTCAGCTTCCCTTGT
GGCCGGACATGGTTATGTGTCGAGCATCGAGGTCGACGGCACTACTTACG
GTGGCTACCTCGTTGACACCTACTACTACGAGTCTGATCCCCCGGAGCTG
ATTGCCTGGTCCACGAATGCCACGGACGATGGCTATGTCTCTCCCACTCA
ATACGACAGCTCCAACATTGTCTGCCATCGTGGCTCCGCTCCCGGTGCCC
TCGCTGCTCCGGTTACTCCGGGTGGAACTGTCAAGATGACCTGGAACACT
TGGCCTGATGACCACCATGGCCCGGTGATCACCTACCTGGCCAACTGCAA
CGGCTCTTGCTCTGACGTCGATAAGACGGCTTTGCAGTTTTTCAAGATTG
ATGCTGGTGGCTTGATCGATGATTCCGAGATTCCTGGTACCTGGGCTACC
GACAAGCTCATCGATAATAACTACACCCGAAGCATCACCATTCCATCTGA
TATCGAGGCCGGAAACTACGTTCTTCGCCATGAGATCATTGCCCTGCACG
GTGCTGAGGACCTGGACGGCGCCCAGAACTACCCCCAGTGCATTAACCTG
AACGTCACCGGAAGCGGTACTGCCACCCCAAGCGGAACCCTGGGAACTGC
ATTGTACATGGACACCGACCCCGGAATCTACATCGACATCTGGCAGAGTA
TCAGCAGTTACACCATCCCCGGCCCGACCCTCTACACTGCTGGCAGCACT
GCCACCGCTGCTGCTTCTTCTGCGACCACCACTGCTGCAGCCACCAGCGC
CTCGACGACCGAGGCTGCTGTTGTGACCTCCGCTGCCGCGTCTTATGCTA
GTGCCGGATCCCAGACGACCATGGTCACCTCCTCTCGTCCTCAGCCCACT
GGCAGCTCCGGCAGCTCCGGCAGCTCCTCCAATGTTGGTAGCTCTGGTAG
CACCAACAAACAATCCGGCAGTGGCTCAACGGCTGGCGGACAGTTCGGTC
AAACCCAGCCTGGCATGGCAGGATCCGACAACACCAGCCCCTCCGATTCG
GCCTCTACCCCCACCAGCTCCACTCCCAGCGCTGCTTCTAGCTCCGCATC
TTCGGCTACTTCGGGCGTCTTGAGCGGCTCCTGCAGCCAGGAAGACTACT
GGTACTGCAATGGCGGCACGGCGTTCCAGCGTTGCGTCAACGGCGAGTGG
GACGCATCTCAGAGCATGGCTGCGGGCACTGAGTGCACTCCTGGGATCTC
AGAGACGCTGACCATCGCTGCATCTTCGAAGCGTCGTGATGTTAGCGGTC
TTCGCCGTCGCCGGCTGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_7170CAN33_7170Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7170-T1.cdsCAN33_7170-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7170-T1.exon1CAN33_7170-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7170-T1CAN33_7170-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-25)
NoteCAZy:AA9
DBxrefInterPro:IPR005103
DBxrefPFAM:PF03443
ProductGlycosyl hydrolase family 61 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:2193700..2195019 -
Powered by Drupal