|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000012.1:17469..18788+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_7845-T1 ID=CAN33_7845-T1|Name=CAN33_7845-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1320bp|location=Sequence derived from alignment at NKJJ01000012.1:17469..18788+ (Aspergillus niger FDAARGOS_311)
ATGTCAACCCTATCAGTGGCTTTTGCATCGAGTGCTTATTCAGGAGACTT
GTCTGCCATTTGTCACTATTTTGGAGTTTCTGAAGAGGCTGCGACGCTGG
GATTATCGCTTTATGTCCTGGGATTCGCGATAGGGCCTCTACTATGGGCC
CCTCTGAGTGAGGCATTTGGCAGGAGAATCATGTTCTTAACCACCTTCAG
CCTTTTCGCCATCTTCAACGTTGCGGCAGCCGTTTCAGCCAATTTCGCCT
CGCTGATCGTTTTCAGGGCTTTGGCCGGAGTGTTCGGCGGTGCACCTCTC
ACTAATTCTGGAGGGGTCGTGGCTGATCTATACGATGCAGAAACGAGAGG
CCTTGCCGCGGTTTTTTACTCATGCGCCACCTTCCTCGGGCCTGTCCTCG
GTCCCATCGCAGGGGGATTCCTTGGGGAGACTCAAGGATGGAGGTGGATT
GAGGGTTTGCTGGCAATTTACTCGGGGGTTATGTTAATCCTTGGTATCGT
TGCTGTTCCCGAAACCTTCAGTATCGTTCTTCTTCGGCGACGAGCCGCTA
TGCTCTCGATGCAGACGGGAAAGTTCTATGTTACAAGTGACGATCATCGT
AACCCTCCAGGGTCTCTAGTGGAGAGAGTTCAGGAAGCGACCAGTCGTCC
TTTGCGCCTGCTCTCCAAAGAGCCTACTGTGATTGTCCTCGCGCTCTACA
TGTCTTTCATTTACGGCACCACCTATCTACTGCTAGCAGCGCTACCTATC
GTTTTCCAAAAAGTCCGCGGATGGAGCCCAGGGATTGGTAGCCTTGTATT
CATATCAATTGCGATAGGCATGTTTTTTGCGACAGCTTTTATGGTCTTCA
TCAACCATCATTACGCAAGAAAATTCAGAGCATCCCAGACTGGCCAACTC
CCCCCGGAAGCACGCCTGCTTTCAGCCCAAGTTGGTGCAGTGTTCATTCC
CATCGGTCTCTTTCTCTTTGCATGGACCAATTCTCCCTCGTTACCATGGG
CTGTCTGTATGGTGGGTATCGCTATGTTTGGATTTGGCAATATCTGTGTC
TCGTTAGCATTGGTCAATTATCTGGTCGATAGCTATGTGGCTTATTCGGC
CTCAGCTCTTGCCGCTGCGACGTTGATGCGATCACTTTGTGGGGCAGTGT
TTCCGCTTTTCACAACTTATATGTACGAAGGATTGGGGATTCACTGGGCA
AGCAGTGTACCAGGCTTTCTGTCTCTGGCTTGCCTTCCAGCTGCATTCTT
ATTGTGCAAGTATGGACCCCAGATACGCCAACGTTCCAAGTTTGCTATCA
CAATGAGCGTGGGGAAGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000012.1:17469..18788+ >CAN33_7845-T1 ID=CAN33_7845-T1|Name=CAN33_7845-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1320bp|location=Sequence derived from alignment at NKJJ01000012.1:17469..18788+ (Aspergillus niger FDAARGOS_311)
ATGTCAACCCTATCAGTGGCTTTTGCATCGAGTGCTTATTCAGGAGACTT
GTCTGCCATTTGTCACTATTTTGGAGTTTCTGAAGAGGCTGCGACGCTGG
GATTATCGCTTTATGTCCTGGGATTCGCGATAGGGCCTCTACTATGGGCC
CCTCTGAGTGAGGCATTTGGCAGGAGAATCATGTTCTTAACCACCTTCAG
CCTTTTCGCCATCTTCAACGTTGCGGCAGCCGTTTCAGCCAATTTCGCCT
CGCTGATCGTTTTCAGGGCTTTGGCCGGAGTGTTCGGCGGTGCACCTCTC
ACTAATTCTGGAGGGGTCGTGGCTGATCTATACGATGCAGAAACGAGAGG
CCTTGCCGCGGTTTTTTACTCATGCGCCACCTTCCTCGGGCCTGTCCTCG
GTCCCATCGCAGGGGGATTCCTTGGGGAGACTCAAGGATGGAGGTGGATT
GAGGGTTTGCTGGCAATTTACTCGGGGGTTATGTTAATCCTTGGTATCGT
TGCTGTTCCCGAAACCTTCAGTATCGTTCTTCTTCGGCGACGAGCCGCTA
TGCTCTCGATGCAGACGGGAAAGTTCTATGTTACAAGTGACGATCATCGT
AACCCTCCAGGGTCTCTAGTGGAGAGAGTTCAGGAAGCGACCAGTCGTCC
TTTGCGCCTGCTCTCCAAAGAGCCTACTGTGATTGTCCTCGCGCTCTACA
TGTCTTTCATTTACGGCACCACCTATCTACTGCTAGCAGCGCTACCTATC
GTTTTCCAAAAAGTCCGCGGATGGAGCCCAGGGATTGGTAGCCTTGTATT
CATATCAATTGCGATAGGCATGTTTTTTGCGACAGCTTTTATGGTCTTCA
TCAACCATCATTACGCAAGAAAATTCAGAGCATCCCAGACTGGCCAACTC
CCCCCGGAAGCACGCCTGCTTTCAGCCCAAGTTGGTGCAGTGTTCATTCC
CATCGGTCTCTTTCTCTTTGCATGGACCAATTCTCCCTCGTTACCATGGG
CTGTCTGTATGGTGGGTATCGCTATGTTTGGATTTGGCAATATCTGTGTC
TCGTTAGCATTGGTCAATTATCTGGTCGATAGCTATGTGGCTTATTCGGC
CTCAGCTCTTGCCGCTGCGACGTTGATGCGATCACTTTGTGGGGCAGTGT
TTCCGCTTTTCACAACTTATATGTACGAAGGATTGGGGATTCACTGGGCA
AGCAGTGTACCAGGCTTTCTGTCTCTGGCTTGCCTTCCAGCTGCATTCTT
ATTGTGCAAGTATGGACCCCAGATACGCCAACGTTCCAAGTTTGCTATCA
CAATGAGCGTGGGGAAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005887 | integral component of plasma membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000121.1 |
| Note | EggNog:ENOG41 |
| Note | SMCOG1169:sugar transport protein |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | major facilitator superfamily protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000012.1 | supercontig | NKJJ01000012.1:17469..18788 + |
|
