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CAN33_8785-T1, CAN33_8785-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_8785-T1
Unique NameCAN33_8785-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000012.1:578445..580860-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_8785-T1 ID=CAN33_8785-T1|Name=CAN33_8785-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2416bp|location=Sequence derived from alignment at NKJJ01000012.1:578445..580860- (Aspergillus niger FDAARGOS_311)
ATGGCCTACATGTCTATGTCCCTCCACGCCGTCAACCACCGGTTGACCAA
CGTGCCTGTGAAGCAACTACCGCATCTCGCATCATGCCTCGCATCCTCCA
TTAGCAATTGCGGGGAGCTGCTGTCAACTCCCCAGAGCCAAAAGTCGGGC
AAGACGGACTCTGACAATGCCGTTCAGATTCATAAGCTCATTACTCGCTT
GGGGAGTTTGCTGCAGGACCGCACGTACGAAGGTCGCTGGACCGCGGTGG
TGCTTGTGAAGGCGCTGGTCGAGGCTGGCCAGTGGGAGATTCTACGCTCG
AGCGAACCGTTTGTTCGCGGATTGATCAGCATTTTGGCTGTAAGATGCTC
AATTGAAGACAATACTGCATGGCAGATGCTCACTGAACTGCTGCGAATAG
AAATCGGACCCCGTTTCCACGAAGAAAATGTGCATTATCACCTTAACTCG
CATCTTCCACCTGACCTACCAGTATCCGACCCTCGTTCGCGAGATCACCA
CTCCGTCTCTGCCAGGCTTCATTACCTCTGCCTTGAATCTGATCTCCGTC
AAGCCATCTTCTGAACCCGTCCGGAGACTCAAGCCGAATACTCCCTTCGT
CGAAGTTGTACTCCAAGCCGTCAATGAACTGATCGCAAGGCACCCGACTA
TCTTCCGGCCGTTCACCGCGCAGATTCACAGTATTCTTCAGGTCATCATC
GGATCCACGTCGCCCACTTTCCCGGAACATGTATTGGAAATCGCTCAGCA
GCTATTCATCTCCCTCCACAACTGCGCCCCGAAGAACACCGGCGGCGATG
AATGGAAGAGCGCTTGTCGCATGACCATCACCTCTGTTCACGCGGCGTCG
TCTTACGTGCTGAGGGCCATTGTGGAACAATGGGAGTCCGTTGACCCGTC
GCTACGACAGATGTCGCAACCGCAGAACTACAGCCAAGAAGTGGGCAACG
GCCCTGACGCTTTGGGGCTTGAGGGCTGGCAGGGTCTGAATTCCGGTGTC
AACCGGCTGGTTGTGCTCTTGCGCATGCTCTCTGGATTCGTCGGCACCGC
TACTGCTTCTACCGTGACTATTCCGGTTGGAGCGATCCTGGATCTGACGT
CTCGACTGAACATGGTGTATCCCTCCGGTGGCAGCGACATCCAAGCCAAC
CCCCAGATTGGCCGCGCGGAGCGAGAGCAGCTGCTCACCGAACTCCCTCG
CATCCACATCGCGTGCATGAAGCTCCTTCTTCACCTGGTCAAGGCTCTCG
AAACCAGCGCCATCCCTGTGGCACAGAACATCCTGGAGCAGGCGCTGTGG
GTTTTCCGTGCGGAGCAATTCAGCCGGGATGTCCGCACCGCCGTGTATGA
TCTGGTCTGCGCCCTGCTCACCCGCATCGGCCCCTCCATGACCAAGCAGA
GCGTGTCCTCCCTCGCCTCTATGATCCGCAAATGCTGCCACGACCTCCTG
CCTCCCACCGGCAACCAGGGCGCAGCCACTGAGAAGCCGGACCCCAAGTC
GAAGAACAAGTCCAGCCAAGCCACCGTCAACGCCGACTCCTTCCTGAACC
CCGGCCTGAAACAAGTCCGTCAGACCAGCTCCTCCTCGTCCTTCCCTGAC
CTCACACGCGCTGCTTCCGAGCTCCTCGCCGCCGCGCTGACGCACACACC
GTCCGAGTTCATGTCACCGGCCCTTCGCGCCGAGGTCGACCGCACCCTCA
TCCTGACCTCGGACAAGAACGCTATGCTCGCCAGCGTCCTCAACCCATTC
CCAGCTATGCAAGGCCGTGGTGTCGGCACCAGCATTCTCCCCTTCCTGGC
GCGCAGCTATCCCGCCGAAACGGAAGTGGAATGCCTCATCCGCCCGCGCA
TGCCTGTGGTGATGAGCGGCCCCACAACCAACGGCTACGTGCCCATGGAA
GACGACGAAGACGAAGATGAAGACGCTGCAGCCACCGCCGTTCCCACATC
TACAGCAACCGGGTTCCTTAAGCCCACTCCCACCCCCACCCTCCAACACC
ATGACATGATGGACGTGGAGAAAGATATTCCCTCGCCGCCAAGCAAACGC
AGCTACGCCGATGAAGTCGAGCAGCCGGCGGCATCATCTGCTGTCCCATC
AGCGACGACGACGACGAGTAGCCCCGGCTCGCAGAGCAAAAAGGCCCGGT
TCGAACCAAAGGCTGCTGCTGCGGTGACCCAGCCGCCTCTGGACGCAGCA
TCTCCGGCAACTTTCACCGGCACGGCTGCTATCTCTGTCCCTACGTCGTC
CATCGCCGGGCCGGCTCCGGTGCAGACGCCAAAGCCCGCTCAGTCTTCTA
TTGCTAAGGCATCTGCCTCGGCCGCGGCGGGAGCAGCTGAGGATGAGAGC
GATGATGAAATGCCCTCTCTGAATGTCGACCCGGATACAGATGATGAGGA
TGAGGATGAGGAGTAA
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Coding sequence (CDS) from alignment at NKJJ01000012.1:578445..580860-

>CAN33_8785-T1 ID=CAN33_8785-T1|Name=CAN33_8785-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4710bp|location=Sequence derived from alignment at NKJJ01000012.1:578445..580860- (Aspergillus niger FDAARGOS_311)
AAATCGGACCCCGTTTCCACGAAGAAAATGTGCATTATCACCTTAACTCG
CATCTTCCACCTGACCTACCAGTATCCGACCCTCGTTCGCGAGATCACCA
CTCCGTCTCTGCCAGGCTTCATTACCTCTGCCTTGAATCTGATCTCCGTC
AAGCCATCTTCTGAACCCGTCCGGAGACTCAAGCCGAATACTCCCTTCGT
CGAAGTTGTACTCCAAGCCGTCAATGAACTGATCGCAAGGCACCCGACTA
TCTTCCGGCCGTTCACCGCGCAGATTCACAGTATTCTTCAGGTCATCATC
GGATCCACGTCGCCCACTTTCCCGGAACATGTATTGGAAATCGCTCAGCA
GCTATTCATCTCCCTCCACAACTGCGCCCCGAAGAACACCGGCGGCGATG
AATGGAAGAGCGCTTGTCGCATGACCATCACCTCTGTTCACGCGGCGTCG
TCTTACGTGCTGAGGGCCATTGTGGAACAATGGGAGTCCGTTGACCCGTC
GCTACGACAGATGTCGCAACCGCAGAACTACAGCCAAGAAGTGGGCAACG
GCCCTGACGCTTTGGGGCTTGAGGGCTGGCAGGGTCTGAATTCCGGTGTC
AACCGGCTGGTTGTGCTCTTGCGCATGCTCTCTGGATTCGTCGGCACCGC
TACTGCTTCTACCGTGACTATTCCGGTTGGAGCGATCCTGGATCTGACGT
CTCGACTGAACATGGTGTATCCCTCCGGTGGCAGCGACATCCAAGCCAAC
CCCCAGATTGGCCGCGCGGAGCGAGAGCAGCTGCTCACCGAACTCCCTCG
CATCCACATCGCGTGCATGAAGCTCCTTCTTCACCTGGTCAAGGCTCTCG
AAACCAGCGCCATCCCTGTGGCACAGAACATCCTGGAGCAGGCGCTGTGG
GTTTTCCGTGCGGAGCAATTCAGCCGGGATGTCCGCACCGCCGTGTATGA
TCTGGTCTGCGCCCTGCTCACCCGCATCGGCCCCTCCATGACCAAGCAGA
GCGTGTCCTCCCTCGCCTCTATGATCCGCAAATGCTGCCACGACCTCCTG
CCTCCCACCGGCAACCAGGGCGCAGCCACTGAGAAGCCGGACCCCAAGTC
GAAGAACAAGTCCAGCCAAGCCACCGTCAACGCCGACTCCTTCCTGAACC
CCGGCCTGAAACAAGTCCGTCAGACCAGCTCCTCCTCGTCCTTCCCTGAC
CTCACACGCGCTGCTTCCGAGCTCCTCGCCGCCGCGCTGACGCACACACC
GTCCGAGTTCATGTCACCGGCCCTTCGCGCCGAGGTCGACCGCACCCTCA
TCCTGACCTCGGACAAGAACGCTATGCTCGCCAGCGTCCTCAACCCATTC
CCAGCTATGCAAGGCCGTGGTGTCGGCACCAGCATTCTCCCCTTCCTGGC
GCGCAGCTATCCCGCCGAAACGGAAGTGGAATGCCTCATCCGCCCGCGCA
TGCCTGTGGTGATGAGCGGCCCCACAACCAACGGCTACGTGCCCATGGAA
GACGACGAAGACGAAGATGAAGACGCTGCAGCCACCGCCGTTCCCACATC
TACAGCAACCGGGTTCCTTAAGCCCACTCCCACCCCCACCCTCCAACACC
ATGACATGATGGACGTGGAGAAAGATATTCCCTCGCCGCCAAGCAAACGC
AGCTACGCCGATGAAGTCGAGCAGCCGGCGGCATCATCTGCTGTCCCATC
AGCGACGACGACGACGAGTAGCCCCGGCTCGCAGAGCAAAAAGGCCCGGT
TCGAACCAAAGGCTGCTGCTGCGGTGACCCAGCCGCCTCTGGACGCAGCA
TCTCCGGCAACTTTCACCGGCACGGCTGCTATCTCTGTCCCTACGTCGTC
CATCGCCGGGCCGGCTCCGGTGCAGACGCCAAAGCCCGCTCAGTCTTCTA
TTGCTAAGGCATCTGCCTCGGCCGCGGCGGGAGCAGCTGAGGATGAGAGC
GATGATGAAATGCCCTCTCTGAATGTCGACCCGGATACAGATGATGAGGA
TGAGGATGAGGAGTAAATGGCCTACATGTCTATGTCCCTCCACGCCGTCA
ACCACCGGTTGACCAACGTGCCTGTGAAGCAACTACCGCATCTCGCATCA
TGCCTCGCATCCTCCATTAGCAATTGCGGGGAGCTGCTGTCAACTCCCCA
GAGCCAAAAGTCGGGCAAGACGGACTCTGACAATGCCGTTCAGATTCATA
AGCTCATTACTCGCTTGGGGAGTTTGCTGCAGGACCGCACGTACGAAGGT
CGCTGGACCGCGGTGGTGCTTGTGAAGGCGCTGGTCGAGGCTGGCCAGTG
GGAGATTCTACGCTCGAGCGAACCGTTTGTTCGCGGATTGATCAGCATTT
TGGCTAAATCGGACCCCGTTTCCACGAAGAAAATGTGCATTATCACCTTA
ACTCGCATCTTCCACCTGACCTACCAGTATCCGACCCTCGTTCGCGAGAT
CACCACTCCGTCTCTGCCAGGCTTCATTACCTCTGCCTTGAATCTGATCT
CCGTCAAGCCATCTTCTGAACCCGTCCGGAGACTCAAGCCGAATACTCCC
TTCGTCGAAGTTGTACTCCAAGCCGTCAATGAACTGATCGCAAGGCACCC
GACTATCTTCCGGCCGTTCACCGCGCAGATTCACAGTATTCTTCAGGTCA
TCATCGGATCCACGTCGCCCACTTTCCCGGAACATGTATTGGAAATCGCT
CAGCAGCTATTCATCTCCCTCCACAACTGCGCCCCGAAGAACACCGGCGG
CGATGAATGGAAGAGCGCTTGTCGCATGACCATCACCTCTGTTCACGCGG
CGTCGTCTTACGTGCTGAGGGCCATTGTGGAACAATGGGAGTCCGTTGAC
CCGTCGCTACGACAGATGTCGCAACCGCAGAACTACAGCCAAGAAGTGGG
CAACGGCCCTGACGCTTTGGGGCTTGAGGGCTGGCAGGGTCTGAATTCCG
GTGTCAACCGGCTGGTTGTGCTCTTGCGCATGCTCTCTGGATTCGTCGGC
ACCGCTACTGCTTCTACCGTGACTATTCCGGTTGGAGCGATCCTGGATCT
GACGTCTCGACTGAACATGGTGTATCCCTCCGGTGGCAGCGACATCCAAG
CCAACCCCCAGATTGGCCGCGCGGAGCGAGAGCAGCTGCTCACCGAACTC
CCTCGCATCCACATCGCGTGCATGAAGCTCCTTCTTCACCTGGTCAAGGC
TCTCGAAACCAGCGCCATCCCTGTGGCACAGAACATCCTGGAGCAGGCGC
TGTGGGTTTTCCGTGCGGAGCAATTCAGCCGGGATGTCCGCACCGCCGTG
TATGATCTGGTCTGCGCCCTGCTCACCCGCATCGGCCCCTCCATGACCAA
GCAGAGCGTGTCCTCCCTCGCCTCTATGATCCGCAAATGCTGCCACGACC
TCCTGCCTCCCACCGGCAACCAGGGCGCAGCCACTGAGAAGCCGGACCCC
AAGTCGAAGAACAAGTCCAGCCAAGCCACCGTCAACGCCGACTCCTTCCT
GAACCCCGGCCTGAAACAAGTCCGTCAGACCAGCTCCTCCTCGTCCTTCC
CTGACCTCACACGCGCTGCTTCCGAGCTCCTCGCCGCCGCGCTGACGCAC
ACACCGTCCGAGTTCATGTCACCGGCCCTTCGCGCCGAGGTCGACCGCAC
CCTCATCCTGACCTCGGACAAGAACGCTATGCTCGCCAGCGTCCTCAACC
CATTCCCAGCTATGCAAGGCCGTGGTGTCGGCACCAGCATTCTCCCCTTC
CTGGCGCGCAGCTATCCCGCCGAAACGGAAGTGGAATGCCTCATCCGCCC
GCGCATGCCTGTGGTGATGAGCGGCCCCACAACCAACGGCTACGTGCCCA
TGGAAGACGACGAAGACGAAGATGAAGACGCTGCAGCCACCGCCGTTCCC
ACATCTACAGCAACCGGGTTCCTTAAGCCCACTCCCACCCCCACCCTCCA
ACACCATGACATGATGGACGTGGAGAAAGATATTCCCTCGCCGCCAAGCA
AACGCAGCTACGCCGATGAAGTCGAGCAGCCGGCGGCATCATCTGCTGTC
CCATCAGCGACGACGACGACGAGTAGCCCCGGCTCGCAGAGCAAAAAGGC
CCGGTTCGAACCAAAGGCTGCTGCTGCGGTGACCCAGCCGCCTCTGGACG
CAGCATCTCCGGCAACTTTCACCGGCACGGCTGCTATCTCTGTCCCTACG
TCGTCCATCGCCGGGCCGGCTCCGGTGCAGACGCCAAAGCCCGCTCAGTC
TTCTATTGCTAAGGCATCTGCCTCGGCCGCGGCGGGAGCAGCTGAGGATG
AGAGCGATGATGAAATGCCCTCTCTGAATGTCGACCCGGATACAGATGAT
GAGGATGAGGATGAGGAGTAAATGGCCTACATGTCTATGTCCCTCCACGC
CGTCAACCACCGGTTGACCAACGTGCCTGTGAAGCAACTACCGCATCTCG
CATCATGCCTCGCATCCTCCATTAGCAATTGCGGGGAGCTGCTGTCAACT
CCCCAGAGCCAAAAGTCGGGCAAGACGGACTCTGACAATGCCGTTCAGAT
TCATAAGCTCATTACTCGCTTGGGGAGTTTGCTGCAGGACCGCACGTACG
AAGGTCGCTGGACCGCGGTGGTGCTTGTGAAGGCGCTGGTCGAGGCTGGC
CAGTGGGAGATTCTACGCTCGAGCGAACCGTTTGTTCGCGGATTGATCAG
CATTTTGGCT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_8785CAN33_8785Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_8785-T1CAN33_8785-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_8785-T1.cdsCAN33_8785-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_8785-T1.exon2CAN33_8785-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_8785-T1.exon1CAN33_8785-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR016024
DBxrefInterPro:IPR012583
DBxrefPFAM:PF08167
ProductrRNA processing/ribosome biogenesis family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000012.1supercontigNKJJ01000012.1:578445..580860 -
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