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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000012.1:783388..783997+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_9055-T1 ID=CAN33_9055-T1|Name=CAN33_9055-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=610bp|location=Sequence derived from alignment at NKJJ01000012.1:783388..783997+ (Aspergillus niger FDAARGOS_311)
ATGACAGGCAGCAAATCATCACGACCGACTTCCGAGACATCTGCTCCGGG
TCTCCCCGCAACATTAGGCCAAACTGCGCGCGCCACGGACGACGATGCCA
AGCTCATCTTCGGTACTGTTTTCTCCCTGCGCAACATGGTTCGCAAGCTA
GGAGGCGAGGACGACAAGTAAGGACTCCACCCTACAGCGACGAGGCAACT
CAACTGGGAGGACAGTCATTGACCGCTCCGCCACGTTTATAGCTTCGTTA
CCTACCGCACTAGCCAATACAAGCTCCATTACTACGAAACGCCGACCAAT
ATCAAGTTCGTTATGCTGACGGACCTCAAGAGTCCAAGCATGCGCGTTGC
TTTGCAGCAGATCTATATCAATCTATACGTCGAATACGGTACGCTCTGGC
TAGTTTAAACGATAACCTCCTCTACAGCTGTATGCTGACCACCTCTACTT
CTAGTGGTCAAGAACCCGTTATCTCCCGCCGAGCATCCAGGTGGCATTGG
AGTGAACAATGAGCTCTTTGAAGAGTCTCTGGAACAGTTTGTGGTATGTG
CCATCAACGTCTCCTAGGCGGATGTAATCTAACCTACAGCAGACTCGTGT
TCTATCGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000012.1:783388..783997+ >CAN33_9055-T1 ID=CAN33_9055-T1|Name=CAN33_9055-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1680bp|location=Sequence derived from alignment at NKJJ01000012.1:783388..783997+ (Aspergillus niger FDAARGOS_311)
ATGACAGGCAGCAAATCATCACGACCGACTTCCGAGACATCTGCTCCGGG
TCTCCCCGCAACATTAGGCCAAACTGCGCGCGCCACGGACGACGATGCCA
AGCTCATCTTCGGTACTGTTTTCTCCCTGCGCAACATGGTTCGCAAGCTA
GGAGGCGAGGACGACAACTTCGTTACCTACCGCACTAGCCAATACAAGCT
CCATTACTACGAAACGCCGACCAATATCAAGTTCGTTATGCTGACGGACC
TCAAGAGTCCAAGCATGCGCGTTGCTTTGCAGCAGATCTATATCAATCTA
TACGTCGAATACGTGGTCAAGAACCCGTTATCTCCCGCCGAGCATCCAGG
TGGCATTGGAGTGAACAATGAGCTCTTTGAAGAGTCTCTGGAACAGTTTG
TGACTCGTGTTCTATCGTGAATGACAGGCAGCAAATCATCACGACCGACT
TCCGAGACATCTGCTCCGGGTCTCCCCGCAACATTAGGCCAAACTGCGCG
CGCCACGGACGACGATGCCAAGCTCATCTTCGGTACTGTTTTCTCCCTGC
GCAACATGGTTCGCAAGCTAGGAGGCGAGGACGACAACTTCGTTACCTAC
CGCACTAGCCAATACAAGCTCCATTACTACGAAACGCCGACCAATATCAA
GTTCGTTATGCTGACGGACCTCAAGAGTCCAAGCATGCGCGTTGCTTTGC
AGCAGATCTATATCAATCTATACGTCGAATACGTGGTCAAGAACCCGTTA
TCTCCCGCCGAGCATCCAGGTGGCATTGGAGTGAACAATGAGCTCTTTGA
AGAGTCTCTGGAACAGTTTGTGACTCGTGTTCTATCGTGAATGACAGGCA
GCAAATCATCACGACCGACTTCCGAGACATCTGCTCCGGGTCTCCCCGCA
ACATTAGGCCAAACTGCGCGCGCCACGGACGACGATGCCAAGCTCATCTT
CGGTACTGTTTTCTCCCTGCGCAACATGGTTCGCAAGCTAGGAGGCGAGG
ACGACAACTTCGTTACCTACCGCACTAGCCAATACAAGCTCCATTACTAC
GAAACGCCGACCAATATCAAGTTCGTTATGCTGACGGACCTCAAGAGTCC
AAGCATGCGCGTTGCTTTGCAGCAGATCTATATCAATCTATACGTCGAAT
ACGTGGTCAAGAACCCGTTATCTCCCGCCGAGCATCCAGGTGGCATTGGA
GTGAACAATGAGCTCTTTGAAGAGTCTCTGGAACAGTTTGTGACTCGTGT
TCTATCGTGAATGACAGGCAGCAAATCATCACGACCGACTTCCGAGACAT
CTGCTCCGGGTCTCCCCGCAACATTAGGCCAAACTGCGCGCGCCACGGAC
GACGATGCCAAGCTCATCTTCGGTACTGTTTTCTCCCTGCGCAACATGGT
TCGCAAGCTAGGAGGCGAGGACGACAACTTCGTTACCTACCGCACTAGCC
AATACAAGCTCCATTACTACGAAACGCCGACCAATATCAAGTTCGTTATG
CTGACGGACCTCAAGAGTCCAAGCATGCGCGTTGCTTTGCAGCAGATCTA
TATCAATCTATACGTCGAATACGTGGTCAAGAACCCGTTATCTCCCGCCG
AGCATCCAGGTGGCATTGGAGTGAACAATGAGCTCTTTGAAGAGTCTCTG
GAACAGTTTGTGACTCGTGTTCTATCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0030008 | TRAPP complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016192 | vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011012 |
| DBxref | InterPro:IPR007233 |
| DBxref | PFAM:PF04099 |
| Product | Sybindin-like family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000012.1 | supercontig | NKJJ01000012.1:783388..783997 + |
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