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CAN33_9070-T1, CAN33_9070-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_9070-T1
Unique NameCAN33_9070-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000012.1:799521..800744+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_9070-T1 ID=CAN33_9070-T1|Name=CAN33_9070-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1224bp|location=Sequence derived from alignment at NKJJ01000012.1:799521..800744+ (Aspergillus niger FDAARGOS_311)
ATGTCTTGGGCAGGTGCGCTGAATACACCCCCGTTCCTACCTATCGATGG
ATCCTGCGCTATAGGGACCCATTCTCTCTCTCTCTCGTCTGACTTGTCAT
TCTTACTGGGTCTACAGGATTCAAGAAAAATGTCAACCGCGCTACCACGC
AGGTGATGATGAAGACGGGTATGTTGGATCAGGGCCCCCGCTCGAGTCGA
GGATGGAGAAACTCTCCGATATATGTGCATTATTGCTTGCTTGTGCTAGG
TGGAATTCACTGACGCACTGGCTTGGGTTGAACAGGACATGTGGAGCGCA
CAAGTGATCGCGATTATGAGATTGAAGAGCGGTATGGATAGTCTGACTGA
TTGGATATGAGGGGATCTTGTTTGGCTAATATGGACACGATGCGTTACAG
TCGGTACCGGACGATGGAAGCCGCCGCAAACCGGTTACAGAAAGAGGCAA
AGGGATACTTGGATTCGCTACGAGGTGTGTTTTGATGTTCCGGTCGCTAG
AATGTTGGTTATGATGCGGAGTCGGATGCTGACGTCGGACGGTGATGGAC
AGCTATGACTGCCTCGCAGATGCGGATTGCTGAGACTATTGATGCCTTCT
ATGGCGATGCCGGAACAAATGATGGCGTGAGTCGGAGTTATAAGCAGGCT
GTGGAGGATCTGGATGCGGAAACGATCAAGGCGCTGGACGGCCCGTACCG
GTATGTTGGATCTATTGCTGTGGACGCCCTTTTTTGGCATTGCGACTCAT
GTGTTGACTGGTATTCGTAGCTCGACTGTGTTGGAGCCCATCTCTCGGTT
CTGTGCCTACTTCCCGGATATCAACGAGTGCATTAAGAAGCGCAACCACA
AGTTACTCGATTACGATTCGATGCGCGCCAAGGTCAAGAAGCTGGTTGAG
AAGCCCGATAAGGATGCGACGAAACTGCCTCGGATGGAGCGCGAGACGGA
AATTGCCAAGCAAGCGTATGAGCAGTTGAACGAACAGCTCTTCACCGAAC
TTCCTCAGCTCATTGACCTGCGGGTACCCTACCTGGATCCTAGCTTCGAG
GCTCTGGTGAAGATTCAATTGCGGTTCTGCGCGGAGGCATATTCGCGCAT
GGCGCAGGTGCAACAGTACTTGGATGCGGAGACGAGGGATCAGTATGCCC
GGGGAGACCTGGACAACCGGGTGGAAGAAGTGTTGCAGGAGATTCGGGAT
CTGAGCATAGCAGGCACGGTCTGA
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Coding sequence (CDS) from alignment at NKJJ01000012.1:799521..800744+

>CAN33_9070-T1 ID=CAN33_9070-T1|Name=CAN33_9070-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4716bp|location=Sequence derived from alignment at NKJJ01000012.1:799521..800744+ (Aspergillus niger FDAARGOS_311)
ATGTCTTGGGCAGGATTCAAGAAAAATGTCAACCGCGCTACCACGCAGGT
GATGATGAAGACGGGACATGTGGAGCGCACAAGTGATCGCGATTATGAGA
TTGAAGAGCGTCGGTACCGGACGATGGAAGCCGCCGCAAACCGGTTACAG
AAAGAGGCAAAGGGATACTTGGATTCGCTACGAGCTATGACTGCCTCGCA
GATGCGGATTGCTGAGACTATTGATGCCTTCTATGGCGATGCCGGAACAA
ATGATGGCGTGAGTCGGAGTTATAAGCAGGCTGTGGAGGATCTGGATGCG
GAAACGATCAAGGCGCTGGACGGCCCGTACCGCTCGACTGTGTTGGAGCC
CATCTCTCGGTTCTGTGCCTACTTCCCGGATATCAACGAGTGCATTAAGA
AGCGCAACCACAAGTTACTCGATTACGATTCGATGCGCGCCAAGGTCAAG
AAGCTGGTTGAGAAGCCCGATAAGGATGCGACGAAACTGCCTCGGATGGA
GCGCGAGACGGAAATTGCCAAGCAAGCGTATGAGCAGTTGAACGAACAGC
TCTTCACCGAACTTCCTCAGCTCATTGACCTGCGGGTACCCTACCTGGAT
CCTAGCTTCGAGGCTCTGGTGAAGATTCAATTGCGGTTCTGCGCGGAGGC
ATATTCGCGCATGGCGCAGGTGCAACAGTACTTGGATGCGGAGACGAGGG
ATCAGTATGCCCGGGGAGACCTGGACAACCGGGTGGAAGAAGTGTTGCAG
GAGATTCGGGATCTGAGCATAGCAGGCACGGTCTGAATGTCTTGGGCAGG
ATTCAAGAAAAATGTCAACCGCGCTACCACGCAGGTGATGATGAAGACGG
GACATGTGGAGCGCACAAGTGATCGCGATTATGAGATTGAAGAGCGTCGG
TACCGGACGATGGAAGCCGCCGCAAACCGGTTACAGAAAGAGGCAAAGGG
ATACTTGGATTCGCTACGAGCTATGACTGCCTCGCAGATGCGGATTGCTG
AGACTATTGATGCCTTCTATGGCGATGCCGGAACAAATGATGGCGTGAGT
CGGAGTTATAAGCAGGCTGTGGAGGATCTGGATGCGGAAACGATCAAGGC
GCTGGACGGCCCGTACCGCTCGACTGTGTTGGAGCCCATCTCTCGGTTCT
GTGCCTACTTCCCGGATATCAACGAGTGCATTAAGAAGCGCAACCACAAG
TTACTCGATTACGATTCGATGCGCGCCAAGGTCAAGAAGCTGGTTGAGAA
GCCCGATAAGGATGCGACGAAACTGCCTCGGATGGAGCGCGAGACGGAAA
TTGCCAAGCAAGCGTATGAGCAGTTGAACGAACAGCTCTTCACCGAACTT
CCTCAGCTCATTGACCTGCGGGTACCCTACCTGGATCCTAGCTTCGAGGC
TCTGGTGAAGATTCAATTGCGGTTCTGCGCGGAGGCATATTCGCGCATGG
CGCAGGTGCAACAGTACTTGGATGCGGAGACGAGGGATCAGTATGCCCGG
GGAGACCTGGACAACCGGGTGGAAGAAGTGTTGCAGGAGATTCGGGATCT
GAGCATAGCAGGCACGGTCTGAATGTCTTGGGCAGGATTCAAGAAAAATG
TCAACCGCGCTACCACGCAGGTGATGATGAAGACGGGACATGTGGAGCGC
ACAAGTGATCGCGATTATGAGATTGAAGAGCGTCGGTACCGGACGATGGA
AGCCGCCGCAAACCGGTTACAGAAAGAGGCAAAGGGATACTTGGATTCGC
TACGAGCTATGACTGCCTCGCAGATGCGGATTGCTGAGACTATTGATGCC
TTCTATGGCGATGCCGGAACAAATGATGGCGTGAGTCGGAGTTATAAGCA
GGCTGTGGAGGATCTGGATGCGGAAACGATCAAGGCGCTGGACGGCCCGT
ACCGCTCGACTGTGTTGGAGCCCATCTCTCGGTTCTGTGCCTACTTCCCG
GATATCAACGAGTGCATTAAGAAGCGCAACCACAAGTTACTCGATTACGA
TTCGATGCGCGCCAAGGTCAAGAAGCTGGTTGAGAAGCCCGATAAGGATG
CGACGAAACTGCCTCGGATGGAGCGCGAGACGGAAATTGCCAAGCAAGCG
TATGAGCAGTTGAACGAACAGCTCTTCACCGAACTTCCTCAGCTCATTGA
CCTGCGGGTACCCTACCTGGATCCTAGCTTCGAGGCTCTGGTGAAGATTC
AATTGCGGTTCTGCGCGGAGGCATATTCGCGCATGGCGCAGGTGCAACAG
TACTTGGATGCGGAGACGAGGGATCAGTATGCCCGGGGAGACCTGGACAA
CCGGGTGGAAGAAGTGTTGCAGGAGATTCGGGATCTGAGCATAGCAGGCA
CGGTCTGAATGTCTTGGGCAGGATTCAAGAAAAATGTCAACCGCGCTACC
ACGCAGGTGATGATGAAGACGGGACATGTGGAGCGCACAAGTGATCGCGA
TTATGAGATTGAAGAGCGTCGGTACCGGACGATGGAAGCCGCCGCAAACC
GGTTACAGAAAGAGGCAAAGGGATACTTGGATTCGCTACGAGCTATGACT
GCCTCGCAGATGCGGATTGCTGAGACTATTGATGCCTTCTATGGCGATGC
CGGAACAAATGATGGCGTGAGTCGGAGTTATAAGCAGGCTGTGGAGGATC
TGGATGCGGAAACGATCAAGGCGCTGGACGGCCCGTACCGCTCGACTGTG
TTGGAGCCCATCTCTCGGTTCTGTGCCTACTTCCCGGATATCAACGAGTG
CATTAAGAAGCGCAACCACAAGTTACTCGATTACGATTCGATGCGCGCCA
AGGTCAAGAAGCTGGTTGAGAAGCCCGATAAGGATGCGACGAAACTGCCT
CGGATGGAGCGCGAGACGGAAATTGCCAAGCAAGCGTATGAGCAGTTGAA
CGAACAGCTCTTCACCGAACTTCCTCAGCTCATTGACCTGCGGGTACCCT
ACCTGGATCCTAGCTTCGAGGCTCTGGTGAAGATTCAATTGCGGTTCTGC
GCGGAGGCATATTCGCGCATGGCGCAGGTGCAACAGTACTTGGATGCGGA
GACGAGGGATCAGTATGCCCGGGGAGACCTGGACAACCGGGTGGAAGAAG
TGTTGCAGGAGATTCGGGATCTGAGCATAGCAGGCACGGTCTGAATGTCT
TGGGCAGGATTCAAGAAAAATGTCAACCGCGCTACCACGCAGGTGATGAT
GAAGACGGGACATGTGGAGCGCACAAGTGATCGCGATTATGAGATTGAAG
AGCGTCGGTACCGGACGATGGAAGCCGCCGCAAACCGGTTACAGAAAGAG
GCAAAGGGATACTTGGATTCGCTACGAGCTATGACTGCCTCGCAGATGCG
GATTGCTGAGACTATTGATGCCTTCTATGGCGATGCCGGAACAAATGATG
GCGTGAGTCGGAGTTATAAGCAGGCTGTGGAGGATCTGGATGCGGAAACG
ATCAAGGCGCTGGACGGCCCGTACCGCTCGACTGTGTTGGAGCCCATCTC
TCGGTTCTGTGCCTACTTCCCGGATATCAACGAGTGCATTAAGAAGCGCA
ACCACAAGTTACTCGATTACGATTCGATGCGCGCCAAGGTCAAGAAGCTG
GTTGAGAAGCCCGATAAGGATGCGACGAAACTGCCTCGGATGGAGCGCGA
GACGGAAATTGCCAAGCAAGCGTATGAGCAGTTGAACGAACAGCTCTTCA
CCGAACTTCCTCAGCTCATTGACCTGCGGGTACCCTACCTGGATCCTAGC
TTCGAGGCTCTGGTGAAGATTCAATTGCGGTTCTGCGCGGAGGCATATTC
GCGCATGGCGCAGGTGCAACAGTACTTGGATGCGGAGACGAGGGATCAGT
ATGCCCGGGGAGACCTGGACAACCGGGTGGAAGAAGTGTTGCAGGAGATT
CGGGATCTGAGCATAGCAGGCACGGTCTGAATGTCTTGGGCAGGATTCAA
GAAAAATGTCAACCGCGCTACCACGCAGGTGATGATGAAGACGGGACATG
TGGAGCGCACAAGTGATCGCGATTATGAGATTGAAGAGCGTCGGTACCGG
ACGATGGAAGCCGCCGCAAACCGGTTACAGAAAGAGGCAAAGGGATACTT
GGATTCGCTACGAGCTATGACTGCCTCGCAGATGCGGATTGCTGAGACTA
TTGATGCCTTCTATGGCGATGCCGGAACAAATGATGGCGTGAGTCGGAGT
TATAAGCAGGCTGTGGAGGATCTGGATGCGGAAACGATCAAGGCGCTGGA
CGGCCCGTACCGCTCGACTGTGTTGGAGCCCATCTCTCGGTTCTGTGCCT
ACTTCCCGGATATCAACGAGTGCATTAAGAAGCGCAACCACAAGTTACTC
GATTACGATTCGATGCGCGCCAAGGTCAAGAAGCTGGTTGAGAAGCCCGA
TAAGGATGCGACGAAACTGCCTCGGATGGAGCGCGAGACGGAAATTGCCA
AGCAAGCGTATGAGCAGTTGAACGAACAGCTCTTCACCGAACTTCCTCAG
CTCATTGACCTGCGGGTACCCTACCTGGATCCTAGCTTCGAGGCTCTGGT
GAAGATTCAATTGCGGTTCTGCGCGGAGGCATATTCGCGCATGGCGCAGG
TGCAACAGTACTTGGATGCGGAGACGAGGGATCAGTATGCCCGGGGAGAC
CTGGACAACCGGGTGGAAGAAGTGTTGCAGGAGATTCGGGATCTGAGCAT
AGCAGGCACGGTCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0007015actin filament organization
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HOB3CAN33_9070Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9070-T1CAN33_9070-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9070-T1.exon1CAN33_9070-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_9070-T1.exon2CAN33_9070-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_9070-T1.exon3CAN33_9070-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_9070-T1.exon4CAN33_9070-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_9070-T1.exon5CAN33_9070-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_9070-T1.exon6CAN33_9070-T1.exon6Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9070-T1.cdsCAN33_9070-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
DBxrefInterPro:IPR037429
DBxrefInterPro:IPR027267
DBxrefInterPro:IPR004148
DBxrefInterPro:IPR003005
DBxrefPFAM:PF03114
ProductBAR adaptor protein Hob3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000012.1supercontigNKJJ01000012.1:799521..800744 +
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