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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC12F:310931..312010- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000027-T1 ID=KJC3_000027-T1|Name=KJC3_000027-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1080bp|location=Sequence derived from alignment at JC12F:310931..312010- (Aspergillus niger KJC3)
TCAAAATATAGTCTCTTTACTTGAAGCGGAGAGAAGAAAGTTTGATGCTA
TAGACTACACCCCGCCTGCTCGTCTCATGCAGCGATGCAAAGCTGCTCTT
CGACTACTGAAAAGCGATATCCCCAAGCAGCCAAGGCAAACACATCAACG
GAATGACATAGCTAAACGAAACTTGACCGCATTGTTTGAGATCAGCGCGG
ATGTTTGTGTTCTCCGCTCTTTGACTTTGACAGTGACCGAGCTTGGCTCG
AAGCGCGATTATGGACTCGCTCCGGTATTGACCGAATGGTGGACTGGCGT
GCAACATCCGCGGAGTCTCAGTAATATCTCTCGGGACCTCTGCGTGGAGT
TCGGCCTGCAATATTTGGACGACGCAAATATCTCAAAGACGATCCACCAG
GATGATAGAGTTTCTGAAGTCTCAACCAGTGGTGGGCTGGACTTGGTTAC
AACAGGAATGGATTCTGATAACAGGCTATTTCATGAAGGTGAAAATCCAG
AGGGCTCTTCAAGAGGTAACTTTCCGATCACCCGCCACCCGTTTGCTATG
ATAAGATACTCGGATTCTGAATATGGAAATGAAGGAATGCCGGATCAATA
CCATGCTCAATTGGACCGGCGAGACGAGAATCCTCTACAAGTGAGCACTC
CAAGAAATGCACACGGTATTTTTATATTACGTCTTTCTCATGAAGCATGA
CTAACCACTACATAGATATGAATCAACTGCCTCGCCCGGAAAACCAGCCT
TTGCAATCGGTCCTTCCTTTCCAAAAATCTGAACTGCTCGACTTCCTTGA
TTTTCCGGAAAATCCTTGGGGAAGAAGCACACTTTCAAGTGTACTTATTT
CTGCTCGTCAGGACCTGAGGTTGCTTATGCCTTGGACTGGTACACCTCTT
CCTTGCCTGGAAGTTAGATTGGAAGTGCCAATAGGGTTCAGTGAAGCATT
TATGAAATTCCGCCAATCTAGACTTGCCGCCGGAAATATCGAACAGAAGG
CTGCCCATAAAAACGACAACTATGGCCTCGCCTTAGAATAATGAGCCACC
ATCCAGTGCCCTGGTCCGGACCTGTCATTA back to topCoding sequence (CDS) from alignment at JC12F:310931..312010- >KJC3_000027-T1 ID=KJC3_000027-T1|Name=KJC3_000027-T1|organism=Aspergillus niger KJC3|type=CDS|length=3156bp|location=Sequence derived from alignment at JC12F:310931..312010- (Aspergillus niger KJC3)
CATTTATGAAATTCCGCCAATCTAGACTTGCCGCCGGAAATATCGAACAG
AAGGCTGCCCATAAAAACGACAACTATGGCCTCGCCTTAGAATAAATATG
AATCAACTGCCTCGCCCGGAAAACCAGCCTTTGCAATCGGTCCTTCCTTT
CCAAAAATCTGAACTGCTCGACTTCCTTGATTTTCCGGAAAATCCTTGGG
GAAGAAGCACACTTTCAAGTGTACTTATTTCTGCTCGTCAGGACCTGAGG
TTGCTTATGCCTTGGACTGGAATGCCGGATCAATACCATGCTCAATTGGA
CCGGCGAGACGAGAATCCTCTACAAGTGAGCACTCCAAGAAATGCACACG
ATGCAGCGATGCAAAGCTGCTCTTCGACTACTGAAAAGCGATATCCCCAA
GCAGCCAAGGCAAACACATCAACGGAATGACATAGCTAAACGAAACTTGA
CCGCATTGTTTGAGATCAGCGCGGATGTTTGTGTTCTCCGCTCTTTGACT
TTGACAGTGACCGAGCTTGGCTCGAAGCGCGATTATGGACTCGCTCCGGT
ATTGACCGAATGGTGGACTGGCGTGCAACATCCGCGGAGTCTCAGTAATA
TCTCTCGGGACCTCTGCGTGGAGTTCGGCCTGCAATATTTGGACGACGCA
AATATCTCAAAGACGATCCACCAGGATGATAGAGTTTCTGAAGTCTCAAC
CAGTGGTGGGCTGGACTTGGTTACAACAGGAATGGATTCTGATAACAGGC
TATTTCATGAAGGTGAAAATCCAGAGGGCTCTTCAAGAGCATTTATGAAA
TTCCGCCAATCTAGACTTGCCGCCGGAAATATCGAACAGAAGGCTGCCCA
TAAAAACGACAACTATGGCCTCGCCTTAGAATAAATATGAATCAACTGCC
TCGCCCGGAAAACCAGCCTTTGCAATCGGTCCTTCCTTTCCAAAAATCTG
AACTGCTCGACTTCCTTGATTTTCCGGAAAATCCTTGGGGAAGAAGCACA
CTTTCAAGTGTACTTATTTCTGCTCGTCAGGACCTGAGGTTGCTTATGCC
TTGGACTGGAATGCCGGATCAATACCATGCTCAATTGGACCGGCGAGACG
AGAATCCTCTACAAGTGAGCACTCCAAGAAATGCACACGATGCAGCGATG
CAAAGCTGCTCTTCGACTACTGAAAAGCGATATCCCCAAGCAGCCAAGGC
AAACACATCAACGGAATGACATAGCTAAACGAAACTTGACCGCATTGTTT
GAGATCAGCGCGGATGTTTGTGTTCTCCGCTCTTTGACTTTGACAGTGAC
CGAGCTTGGCTCGAAGCGCGATTATGGACTCGCTCCGGTATTGACCGAAT
GGTGGACTGGCGTGCAACATCCGCGGAGTCTCAGTAATATCTCTCGGGAC
CTCTGCGTGGAGTTCGGCCTGCAATATTTGGACGACGCAAATATCTCAAA
GACGATCCACCAGGATGATAGAGTTTCTGAAGTCTCAACCAGTGGTGGGC
TGGACTTGGTTACAACAGGAATGGATTCTGATAACAGGCTATTTCATGAA
GGTGAAAATCCAGAGGGCTCTTCAAGAGCATTTATGAAATTCCGCCAATC
TAGACTTGCCGCCGGAAATATCGAACAGAAGGCTGCCCATAAAAACGACA
ACTATGGCCTCGCCTTAGAATAAATATGAATCAACTGCCTCGCCCGGAAA
ACCAGCCTTTGCAATCGGTCCTTCCTTTCCAAAAATCTGAACTGCTCGAC
TTCCTTGATTTTCCGGAAAATCCTTGGGGAAGAAGCACACTTTCAAGTGT
ACTTATTTCTGCTCGTCAGGACCTGAGGTTGCTTATGCCTTGGACTGGAA
TGCCGGATCAATACCATGCTCAATTGGACCGGCGAGACGAGAATCCTCTA
CAAGTGAGCACTCCAAGAAATGCACACGATGCAGCGATGCAAAGCTGCTC
TTCGACTACTGAAAAGCGATATCCCCAAGCAGCCAAGGCAAACACATCAA
CGGAATGACATAGCTAAACGAAACTTGACCGCATTGTTTGAGATCAGCGC
GGATGTTTGTGTTCTCCGCTCTTTGACTTTGACAGTGACCGAGCTTGGCT
CGAAGCGCGATTATGGACTCGCTCCGGTATTGACCGAATGGTGGACTGGC
GTGCAACATCCGCGGAGTCTCAGTAATATCTCTCGGGACCTCTGCGTGGA
GTTCGGCCTGCAATATTTGGACGACGCAAATATCTCAAAGACGATCCACC
AGGATGATAGAGTTTCTGAAGTCTCAACCAGTGGTGGGCTGGACTTGGTT
ACAACAGGAATGGATTCTGATAACAGGCTATTTCATGAAGGTGAAAATCC
AGAGGGCTCTTCAAGAGCATTTATGAAATTCCGCCAATCTAGACTTGCCG
CCGGAAATATCGAACAGAAGGCTGCCCATAAAAACGACAACTATGGCCTC
GCCTTAGAATAAATATGAATCAACTGCCTCGCCCGGAAAACCAGCCTTTG
CAATCGGTCCTTCCTTTCCAAAAATCTGAACTGCTCGACTTCCTTGATTT
TCCGGAAAATCCTTGGGGAAGAAGCACACTTTCAAGTGTACTTATTTCTG
CTCGTCAGGACCTGAGGTTGCTTATGCCTTGGACTGGAATGCCGGATCAA
TACCATGCTCAATTGGACCGGCGAGACGAGAATCCTCTACAAGTGAGCAC
TCCAAGAAATGCACACGATGCAGCGATGCAAAGCTGCTCTTCGACTACTG
AAAAGCGATATCCCCAAGCAGCCAAGGCAAACACATCAACGGAATGACAT
AGCTAAACGAAACTTGACCGCATTGTTTGAGATCAGCGCGGATGTTTGTG
TTCTCCGCTCTTTGACTTTGACAGTGACCGAGCTTGGCTCGAAGCGCGAT
TATGGACTCGCTCCGGTATTGACCGAATGGTGGACTGGCGTGCAACATCC
GCGGAGTCTCAGTAATATCTCTCGGGACCTCTGCGTGGAGTTCGGCCTGC
AATATTTGGACGACGCAAATATCTCAAAGACGATCCACCAGGATGATAGA
GTTTCTGAAGTCTCAACCAGTGGTGGGCTGGACTTGGTTACAACAGGAAT
GGATTCTGATAACAGGCTATTTCATGAAGGTGAAAATCCAGAGGGCTCTT
CAAGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000027-T1.utr3p1 | KJC3_000027-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000027-T1.utr5p1 | KJC3_000027-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC12F | supercontig | JC12F:310931..312010 - |
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