You are here

Home

KJC3_000038-T1, KJC3_000038-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000038-T1
Unique NameKJC3_000038-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC14F:8872..9495+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000038-T1 ID=KJC3_000038-T1|Name=KJC3_000038-T1|organism=Aspergillus niger KJC3|type=mRNA|length=624bp|location=Sequence derived from alignment at JC14F:8872..9495+ (Aspergillus niger KJC3)
ATGAAATTACCGAGTCGTCACTTCTCTGATCATAGAAAGAAAAAAAAAGC
GTCCGCAATAGTCATTATCTCTGCATTTCGTACTACCAGAGGTATGTGGA
CTTAGCGTTTCATTATCGATCTAATGCTGACTACACGAGAGAGAACAAGA
GATGGGTAATCCAAAGCTATATGTTGCTTTCTACCGGCCTCGATACGGAA
ATTACCAACATTGGGCTTTATACATAGACGATGATAAAGAAAGCATCATT
TTCGAAGTCACCGGCCAGCACCCTAACTTCCAGCGCAATGTGGTGTACGC
TCGACCGGATGCTTCCAGAAGCTATGTTAGCAATGTTTATGTTGCCACAC
TCCGAGATGACGATATTGCAGACGTCAAAGAAGCAGCGAAGCAAGTTCGA
GTCGACAACGACACTGTTGACTGGGACTGCCAGGACTATGTGCTTGAGCT
GCTTGATAAGTTGGAAGACGAGTTCATCCTAGAAGAGGACGACGAGGACT
ATCGCGAGGCTAGGAAGGAATTGAAGAAGAGAAGGGGAGCAAGTCTCTAA
TATTGCCGCTGTCTTTTTGTTCAACGGAACATGTTCATGAGTGTTCAGAC
TGTCATCTATACCACTCTAGACTC
back to top

Coding sequence (CDS) from alignment at JC14F:8872..9495+

>KJC3_000038-T1 ID=KJC3_000038-T1|Name=KJC3_000038-T1|organism=Aspergillus niger KJC3|type=CDS|length=399bp|location=Sequence derived from alignment at JC14F:8872..9495+ (Aspergillus niger KJC3)
ATGGGTAATCCAAAGCTATATGTTGCTTTCTACCGGCCTCGATACGGAAA
TTACCAACATTGGGCTTTATACATAGACGATGATAAAGAAAGCATCATTT
TCGAAGTCACCGGCCAGCACCCTAACTTCCAGCGCAATGTGGTGTACGCT
CGACCGGATGCTTCCAGAAGCTATGTTAGCAATGTTTATGTTGCCACACT
CCGAGATGACGATATTGCAGACGTCAAAGAAGCAGCGAAGCAAGTTCGAG
TCGACAACGACACTGTTGACTGGGACTGCCAGGACTATGTGCTTGAGCTG
CTTGATAAGTTGGAAGACGAGTTCATCCTAGAAGAGGACGACGAGGACTA
TCGCGAGGCTAGGAAGGAATTGAAGAAGAGAAGGGGAGCAAGTCTCTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000038KJC3_000038Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000038-T1KJC3_000038-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000038-T1.utr5p1KJC3_000038-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_000038-T1.utr5p2KJC3_000038-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000038-T1.exon1KJC3_000038-T1.exon1Aspergillus niger KJC3exon
KJC3_000038-T1.exon2KJC3_000038-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000038-T1.cdsKJC3_000038-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000038-T1.utr3p1KJC3_000038-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC14FsupercontigJC14F:8872..9495 +
Powered by Drupal