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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC14F:63080..65237- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000044-T1 ID=KJC3_000044-T1|Name=KJC3_000044-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2158bp|location=Sequence derived from alignment at JC14F:63080..65237- (Aspergillus niger KJC3)
CACGACCTCCAGGACTAATAATAGCTTCTTCTACGATATTATAAACAGGC
GCCTCTTCCCTCAGACTTAGTTGTTTCAGCTTTAATCTTCACTGCTACCC
ACACAAGTCAACTCGGCAAAACACTGCTCGTCTCGAACTCGGATATCGAC
CACACGCTATCTACTTCCTCTATCAATTTTTATTTCTGTTGGCATCAGCC
GTCAAAAGCCGTTGGCCCTGCGGTCAGCTCGCAATGGGAACTCGAGGTCT
TGAGGTTGTACGCTTCAATCGTCGTTACTACATTCGATATCACCGGCTTG
ACAGCTACTTTGAGGGCCTCGGAGCCAAAATTGTTGCAAAAATCCCCACA
GACCCTGACGAATACCAAAGTACATGAGAGGGGATAGCCTATACTTTATA
ATAAGCTAATGAATGGCAGATTGGCTCCAGTCCATGCGAGCAGAGTATGC
GGCCAAGGAAAGGGCCCTTGAAGCCCTCGTCTACGAGATACGCGACGGCG
TCCAACCCGACTATTCGCAGTTTAGCGAGTTGGTGTCGCTTCCTTCAGAG
ATACCGCGACTAGATGACCATGATGCCGAGTACATATACGTCATCAATCT
CGACCACGAAGTTCTTACCATGAATTACGGCATACATTGGAAGCTGGGCA
ATGTACCGCGTGAGAACAATCAATGGCTTCACGCAATCGATGACAGCATC
TATATGTACAAGCCCACAATCTCCCTCGAGAGGTGTCCGGAAGAGCACAT
GGCCTCGCTGGCCCTGGAGTTGCCCGCGCCCAAATGGCAGATCGACTATA
ACTTTCGCCAAGTAACCCCAGTGACGGATATCGCGGAGGCGCGAAAAGCA
TTTCTCACGCACGTCCTGGCCAATGTCCTTCTTGAGTACAAGGATGAGAT
CACTAACTTTGGGAGGGAGTGGGATCCGGATTCGTTCCCCTTTCGCGAAT
TGACTTTCGCTCTTGTCTCAATTGCCTCTGGCCAGGCTAAATTCCATTCT
TTTCCGGCCCAGCGTTGCAATCCTCGAAATTGTGGGTCATGGAACTGCAA
CTCCAAACACTTACCCAAGTCCCCAGGATGGCTTGACACAACGTGGGCTG
GGAATAGGGCTCCGTTGCTGGAGTTTGGTTCCCTGTCCCATAAAACAGGC
GAGCAGCCAGGGGTAGCGCCCGCGGAGACAATATACTGGTTCAATGACGC
GCTTGTCAGTCTTACGCTGGTGATTGACGGCGAGGCGATCAACAGGGCCG
TTGAATGGGGTCTCCAGCAGGGCCGCGCCAACTTCCAGATAGTCGTCCTT
TCTCTCTTCAAAGTGGCTTTGGCAGAAGTCACTATGCGTAAAAATGGGGT
TCCGATCGTGAAATGCAGCAGCGGTCTTGATCTCTCGCCTTTGCGTGAAG
ACTACTGTATGAGCACACATCCGCGCGAGCGACCAGAGGCAAAACCTGGG
ATGCAGATCCGGCGTCGGCGTGGTGAGCTCTTCATGCAATCGAACTGCAC
GGGGTCAGTCGAAAGACTGCGGAGCCAGTTCCCCGGGCTCGCGGCGTTGG
TCAATTTTTTCCAAGTCGCGGGGAACCGCCGGGCATCGTGGAAATCGCAA
GGCCTTCTGCCATCGGAACTGTACGACCGGATTCTGGACTTTGTGGACTA
TGATACGTGGAAAGCTTGTCTACTCGTATCGCCGGCAGTTCGTGGCTGTT
GCTTGCGCAAATACAGGATTGACGATCGGATCAGGATTGTAGCGGGACCT
TTTGTGAGGCTGCGACAAGAGCGTACAAAGGAACCTCTACTATCATTCGA
CGTTGAAAACGTGCAAACGGGTGATATCCTTGCTGTGCAGTGGGTTCCGT
ATGATTGGAGGACCTTTGAATTGAATTGGATGCCAGTCATTGGCAGCGAC
AGAAAAGCGCTCATGTTAGATGTGTCCATCCAGTATGAGCCGGCAGAGGA
TGAGCCAGTGGAAGCGGACGGTAAAAAATAAACGTCCATGAACTTCTTAA
TCCCAAAATTTCGATCCTATCTTTCGCCCATTTTCGGAGCTTGCTTTGGG
TATTCTTTTCTTTTCGGGTATTCTTTTCTTTTCGAATATATTATTGACGT
GCGTCAAAGCCGGAGCATCGTAGCATAGTAGCTTCAATTATCTAAAGCAG
CATTTCGG back to topCoding sequence (CDS) from alignment at JC14F:63080..65237- >KJC3_000044-T1 ID=KJC3_000044-T1|Name=KJC3_000044-T1|organism=Aspergillus niger KJC3|type=CDS|length=3396bp|location=Sequence derived from alignment at JC14F:63080..65237- (Aspergillus niger KJC3)
ATTGGCTCCAGTCCATGCGAGCAGAGTATGCGGCCAAGGAAAGGGCCCTT
GAAGCCCTCGTCTACGAGATACGCGACGGCGTCCAACCCGACTATTCGCA
GTTTAGCGAGTTGGTGTCGCTTCCTTCAGAGATACCGCGACTAGATGACC
ATGATGCCGAGTACATATACGTCATCAATCTCGACCACGAAGTTCTTACC
ATGAATTACGGCATACATTGGAAGCTGGGCAATGTACCGCGTGAGAACAA
TCAATGGCTTCACGCAATCGATGACAGCATCTATATGTACAAGCCCACAA
TCTCCCTCGAGAGGTGTCCGGAAGAGCACATGGCCTCGCTGGCCCTGGAG
TTGCCCGCGCCCAAATGGCAGATCGACTATAACTTTCGCCAAGTAACCCC
AGTGACGGATATCGCGGAGGCGCGAAAAGCATTTCTCACGCACGTCCTGG
CCAATGTCCTTCTTGAGTACAAGGATGAGATCACTAACTTTGGGAGGGAG
TGGGATCCGGATTCGTTCCCCTTTCGCGAATTGACTTTCGCTCTTGTCTC
AATTGCCTCTGGCCAGGCTAAATTCCATTCTTTTCCGGCCCAGCGTTGCA
ATCCTCGAAATTGTGGGTCATGGAACTGCAACTCCAAACACTTACCCAAG
TCCCCAGGATGGCTTGACACAACGTGGGCTGGGAATAGGGCTCCGTTGCT
GGAGTTTGGTTCCCTGTCCCATAAAACAGGCGAGCAGCCAGGGGTAGCGC
CCGCGGAGACAATATACTGGTTCAATGACGCGCTTGTCAGTCTTACGCTG
GTGATTGACGGCGAGGCGATCAACAGGGCCGTTGAATGGGGTCTCCAGCA
GGGCCGCGCCAACTTCCAGATAGTCGTCCTTTCTCTCTTCAAAGTGGCTT
TGGCAGAAGTCACTATGCGTAAAAATGGGGTTCCGATCGTGAAATGCAGC
AGCGGTCTTGATCTCTCGCCTTTGCGTGAAGACTACTGTATGAGCACACA
TCCGCGCGAGCGACCAGAGGCAAAACCTGGGATGCAGATCCGGCGTCGGC
GTGGTGAGCTCTTCATGCAATCGAACTGCACGGGGTCAGTCGAAAGACTG
CGGAGCCAGTTCCCCGGGCTCGCGGCGTTGGTCAATTTTTTCCAAGTCGC
GGGGAACCGCCGGGCATCGTGGAAATCGCAAGGCCTTCTGCCATCGGAAC
TGTACGACCGGATTCTGGACTTTGTGGACTATGATACGTGGAAAGCTTGT
CTACTCGTATCGCCGGCAGTTCGTGGCTGTTGCTTGCGCAAATACAGGAT
TGACGATCGGATCAGGATTGTAGCGGGACCTTTTGTGAGGCTGCGACAAG
AGCGTACAAAGGAACCTCTACTATCATTCGACGTTGAAAACGTGCAAACG
GGTGATATCCTTGCTGTGCAGTGGGTTCCGTATGATTGGAGGACCTTTGA
ATTGAATTGGATGCCAGTCATTGGCAGCGACAGAAAAGCGCTCATGTTAG
ATGTGTCCATCCAGTATGAGCCGGCAGAGGATGAGCCAGTGGAAGCGGAC
GGTAAAAAATAAATGGGAACTCGAGGTCTTGAGGTTGTACGCTTCAATCG
TCGTTACTACATTCGATATCACCGGCTTGACAGCTACTTTGAGGGCCTCG
GAGCCAAAATTGTTGCAAAAATCCCCACAGACCCTGACGAATACCAAAAT
TGGCTCCAGTCCATGCGAGCAGAGTATGCGGCCAAGGAAAGGGCCCTTGA
AGCCCTCGTCTACGAGATACGCGACGGCGTCCAACCCGACTATTCGCAGT
TTAGCGAGTTGGTGTCGCTTCCTTCAGAGATACCGCGACTAGATGACCAT
GATGCCGAGTACATATACGTCATCAATCTCGACCACGAAGTTCTTACCAT
GAATTACGGCATACATTGGAAGCTGGGCAATGTACCGCGTGAGAACAATC
AATGGCTTCACGCAATCGATGACAGCATCTATATGTACAAGCCCACAATC
TCCCTCGAGAGGTGTCCGGAAGAGCACATGGCCTCGCTGGCCCTGGAGTT
GCCCGCGCCCAAATGGCAGATCGACTATAACTTTCGCCAAGTAACCCCAG
TGACGGATATCGCGGAGGCGCGAAAAGCATTTCTCACGCACGTCCTGGCC
AATGTCCTTCTTGAGTACAAGGATGAGATCACTAACTTTGGGAGGGAGTG
GGATCCGGATTCGTTCCCCTTTCGCGAATTGACTTTCGCTCTTGTCTCAA
TTGCCTCTGGCCAGGCTAAATTCCATTCTTTTCCGGCCCAGCGTTGCAAT
CCTCGAAATTGTGGGTCATGGAACTGCAACTCCAAACACTTACCCAAGTC
CCCAGGATGGCTTGACACAACGTGGGCTGGGAATAGGGCTCCGTTGCTGG
AGTTTGGTTCCCTGTCCCATAAAACAGGCGAGCAGCCAGGGGTAGCGCCC
GCGGAGACAATATACTGGTTCAATGACGCGCTTGTCAGTCTTACGCTGGT
GATTGACGGCGAGGCGATCAACAGGGCCGTTGAATGGGGTCTCCAGCAGG
GCCGCGCCAACTTCCAGATAGTCGTCCTTTCTCTCTTCAAAGTGGCTTTG
GCAGAAGTCACTATGCGTAAAAATGGGGTTCCGATCGTGAAATGCAGCAG
CGGTCTTGATCTCTCGCCTTTGCGTGAAGACTACTGTATGAGCACACATC
CGCGCGAGCGACCAGAGGCAAAACCTGGGATGCAGATCCGGCGTCGGCGT
GGTGAGCTCTTCATGCAATCGAACTGCACGGGGTCAGTCGAAAGACTGCG
GAGCCAGTTCCCCGGGCTCGCGGCGTTGGTCAATTTTTTCCAAGTCGCGG
GGAACCGCCGGGCATCGTGGAAATCGCAAGGCCTTCTGCCATCGGAACTG
TACGACCGGATTCTGGACTTTGTGGACTATGATACGTGGAAAGCTTGTCT
ACTCGTATCGCCGGCAGTTCGTGGCTGTTGCTTGCGCAAATACAGGATTG
ACGATCGGATCAGGATTGTAGCGGGACCTTTTGTGAGGCTGCGACAAGAG
CGTACAAAGGAACCTCTACTATCATTCGACGTTGAAAACGTGCAAACGGG
TGATATCCTTGCTGTGCAGTGGGTTCCGTATGATTGGAGGACCTTTGAAT
TGAATTGGATGCCAGTCATTGGCAGCGACAGAAAAGCGCTCATGTTAGAT
GTGTCCATCCAGTATGAGCCGGCAGAGGATGAGCCAGTGGAAGCGGACGG
TAAAAAATAAATGGGAACTCGAGGTCTTGAGGTTGTACGCTTCAATCGTC
GTTACTACATTCGATATCACCGGCTTGACAGCTACTTTGAGGGCCTCGGA
GCCAAAATTGTTGCAAAAATCCCCACAGACCCTGACGAATACCAAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000044-T1.utr3p1 | KJC3_000044-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000044-T1.utr5p1 | KJC3_000044-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC14F | supercontig | JC14F:63080..65237 - |
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