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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC15F:135968..138865+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000086-T1 ID=KJC3_000086-T1|Name=KJC3_000086-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2898bp|location=Sequence derived from alignment at JC15F:135968..138865+ (Aspergillus niger KJC3)
GACAGTTTGTCCCATTGCTTAATGGGACAGTCTTATATCAAGCCTGGTGT
CTCATATCATCATGGATCTTTTATCAGCTTTGGGCGTAATAAGGTCCGCA
ACAACAGAAAGTCTTGAGAAACACCATCAAGAAGTGTTGGAAACTCTGGA
GGACTTAAGGAGGCGATTGAGCGTGAGTTCTCGATACTGAGGCTAATGAA
TGAGGTAATAACATTTTCGAGACACAGCCCTTTCTAGGCAACCACGCCAG
ACGTGAATCGGTCGAGTCTGATCATTCAGTTTATTCTGCGCATAGCTCAG
ATCAGCTCAGCCCCACTAGCGAGTCCGAAAGCGAGAGCCGTACTGAGAGC
TGCGAATCTTCTACATCAGACAGCCACGTTTATGGAGAGACCGAGAGCGA
TACATCTACGGGGCATGCCTCCGGTATAGGAATGCCAACTGGTTCTATAT
CACATTCGTCATGCCAACCGTCGCAATGGCCCATGAAATTACTTGCGACA
GTTGCCGACGACATCCGTTGGCTGTATGACTACTCGCGGGAAGGTTCGAC
AACGGCTGCTATTCGAAACAAGAGAAACAAAACAACTGATGAAAGAATCA
ATGATATCCTGAGAGTGGAAGGCAAGCGAGGGCGTCCATCAAACGAAGAC
AAGATTTTCAGAGCTTTAGCCCAGAGGTCCATGGGCACTCAATTCACGGA
AATCCAGCGTGAGAATAAGAACCCTAAGTTGCAGACAAGGGTAGATGAAC
TGGTTGAAAGCATTTGTTCGTCCGACCACGAATTGAGAAAGCGAATACAC
AAAAGGTCAAACCTTATCTCCAAGCACCTTCATCGATTCGACCACGATCC
CGATGACAGGAATATATTGTCACGGGGCATAAATGCTGGGTTCAAGCGAT
TGGTGGTAGAAAGGTTATTCGCGCAACGACTGGAGGGATCTGGTCGCCCT
ACTGAGCCAATTGGAATATCAGCCTTCACAGCCCTTGGAGTCACTGCTTT
TGACCGTCTACTCTACGAAGATATTCCCTATTTCCTGGATGAATTATTTA
GTTGTGAAGTGGAATTACCTCTGAACTCGTCACAAGGCGGCCTTAGGACT
GAAGCTGTTCAGCTTCCAGATGCTTTGGTCGCTTTATCGTCATGGTTCAA
TAAGTTGCAAACTGATTACGACGGTGACATCAAACCTCACGCGACATCAA
TGGGTAATGCTGCTTTACAAGATGAACAGCGATCTCGAAAACGGCATTGT
AGACCACGGGTGGATGCCGCGCTATTATACCAACCGGTCGAAAGCTTTGC
TTCAAGATACAATAACGCTGACGTTGGGGGACGTCCAGTTCCCTGCAATG
CAGGTTCGTCTACGCAGTCGACGCAGCAGATTGTCAACGCTTCAACAGAA
GCGACTGTCACATTACCCGAAGTTTCTGCGATGTCTGAATCGCGATTGCC
AACGGATCGTCCTTGCTCTCTAGGTAATTGGGACAGAGACTACGGTGTTT
TGTCAATGCAAACTGTACAGGTTCCTCCTACGGTTTCCGTTTGGGGCAAT
CGTGACAGAGTCCACAGAGATGTCACATCCTCCAGCATGAATAAGCAGCG
AAGCTTAACAGGTTTCAATTCATGGGGGAATTGGGATCAAGACTATGACA
TTGCCTCAATTGGAACTGAACAGACAACATCATTAACTTTTCCATATGGG
AATTGGGATCAAAATCATGGAACTGTTTCTTCAGAATTACAAGAGCAACA
CCATGTACCACGGGGTAACTGGGATCAGGAATACGCTGCAGCTTCACCAG
GAGTCGAGCGGACTGCTTCATCCTTTACCGAGGCAAATTGGGACAAACAC
GCCAGTAGAGCTGTCGTCTCGGACTCACTAGAGCAATCCAGGGTGACACA
CAGTCAACTATGGGGCAACTGGGACCAAGACTACGGTGCCCCGTCAGGAC
CTAGCTGGACAAGTTCGGTTCCTATTCTTATGTCGTTACAAGTCTGACGT
TATGAGTGACATCAACCAGATGACATTGCTCTCCCCAATAAATGACCGGT
CCGCGTGTAATAGAAGCTAACTGTAGAAGGCTCGCAGAAAAAGCGCTATA
AATACAGAGCAAGCATAAGCGTGTATATAGGTAGAAAACCTATAATTTGG
ACATCCTCCATGCACTATCGCTTATACACAATTGTCTGAAACATTCCGCC
ACCTCCCGGCGCATGGAAATATATCAAATCACCTCTCCAGACCACCGCAT
CCCCAACATCAAGGCTTAGAGCGGCCGTTGAGGATGAACTGTTTGGTTTC
GATTGGTTCGCCCTCGTACCCACATAGAACGTATACCAACCATTCTCAGG
CGAGAGACGCGTTAGAGCGATGGTAGCATATATTTCCCCCTTCTCCGCTG
TTTTTAGTCGCGTCGGATCGGCTTCGGTCTCGCGAAAGACGCCCGCGAAC
ATATGATCTGGCTCTGGTGGTATTGGTTTCGGGTGCAAAAATTTACGCAA
GGCCGTTTGGTCTGTTTTCTGCGTTTGATTAGCACAGTCCGTCTTTCATA
TATGAGGTATTTCAGCTCACAGAAACAAATTCCTTCTTCACTTCAGAGCA
AACGAGAGGTATTTCGAATGCGTCGTATTTCTCTCGGCTATATTTCGGTT
GCTTAAGCAATGTTTCAGCGGCCTTTTGGGCCAATGTTTTTGGGACAGCC
TCTCGAATGATTTCGTACCCAAGGCTATCCGCCATCTCTGGCTGTAGTTT
CGTTTCCTTTGGAGAAAAGAGCAGAAAAGAGACGAGCCCGTTAGAAGAGA
ACCTAGGCTCAACAGCGCAACGACGTGCGATAGTCTCAAATGGATGAGCA
GTTGGGCTCGATGCCTTGAGGGAGAATAGCGGGGCTAGCGGGGCAATG back to topCoding sequence (CDS) from alignment at JC15F:135968..138865+ >KJC3_000086-T1 ID=KJC3_000086-T1|Name=KJC3_000086-T1|organism=Aspergillus niger KJC3|type=CDS|length=3762bp|location=Sequence derived from alignment at JC15F:135968..138865+ (Aspergillus niger KJC3)
ATGGATCTTTTATCAGCTTTGGGCGTAATAAGGTCCGCAACAACAGAAAG
TCTTGAGAAACACCATCAAGAAGTGTTGGAAACTCTGGAGGACTTAAGGA
GGCGATTGAGCCCCTTTCTAGGCAACCACGCCAGACGTGAATCGGTCGAG
TCTGATCATTCAGTTTATTCTGCGCATAGCTCAGATCAGCTCAGCCCCAC
TAGCGAGTCCGAAAGCGAGAGCCGTACTGAGAGCTGCGAATCTTCTACAT
CAGACAGCCACGTTTATGGAGAGACCGAGAGCGATACATCTACGGGGCAT
GCCTCCGGTATAGGAATGCCAACTGGTTCTATATCACATTCGTCATGCCA
ACCGTCGCAATGGCCCATGAAATTACTTGCGACAGTTGCCGACGACATCC
GTTGGCTGTATGACTACTCGCGGGAAGGTTCGACAACGGCTGCTATTCGA
AACAAGAGAAACAAAACAACTGATGAAAGAATCAATGATATCCTGAGAGT
GGAAGGCAAGCGAGGGCGTCCATCAAACGAAGACAAGATTTTCAGAGCTT
TAGCCCAGAGGTCCATGGGCACTCAATTCACGGAAATCCAGCGTGAGAAT
AAGAACCCTAAGTTGCAGACAAGGGTAGATGAACTGGTTGAAAGCATTTG
TTCGTCCGACCACGAATTGAGAAAGCGAATACACAAAAGGTCAAACCTTA
TCTCCAAGCACCTTCATCGATTCGACCACGATCCCGATGACAGGAATATA
TTGTCACGGGGCATAAATGCTGGGTTCAAGCGATTGGTGGTAGAAAGGTT
ATTCGCGCAACGACTGGAGGGATCTGGTCGCCCTACTGAGCCAATTGGAA
TATCAGCCTTCACAGCCCTTGGAGTCACTGCTTTTGACCGTCTACTCTAC
GAAGATATTCCCTATTTCCTGGATGAATTATTTAGTTGTGAAGTGGAATT
ACCTCTGAACTCGTCACAAGGCGGCCTTAGGACTGAAGCTGTTCAGCTTC
CAGATGCTTTGGTCGCTTTATCGTCATGGTTCAATAAGTTGCAAACTGAT
TACGACGGTGACATCAAACCTCACGCGACATCAATGGGTAATGCTGCTTT
ACAAGATGAACAGCGATCTCGAAAACGGCATTGTAGACCACGGGTGGATG
CCGCGCTATTATACCAACCGGTCGAAAGCTTTGCTTCAAGATACAATAAC
GCTGACGTTGGGGGACGTCCAGTTCCCTGCAATGCAGGTTCGTCTACGCA
GTCGACGCAGCAGATTGTCAACGCTTCAACAGAAGCGACTGTCACATTAC
CCGAAGTTTCTGCGATGTCTGAATCGCGATTGCCAACGGATCGTCCTTGC
TCTCTAGGTAATTGGGACAGAGACTACGGTGTTTTGTCAATGCAAACTGT
ACAGGTTCCTCCTACGGTTTCCGTTTGGGGCAATCGTGACAGAGTCCACA
GAGATGTCACATCCTCCAGCATGAATAAGCAGCGAAGCTTAACAGGTTTC
AATTCATGGGGGAATTGGGATCAAGACTATGACATTGCCTCAATTGGAAC
TGAACAGACAACATCATTAACTTTTCCATATGGGAATTGGGATCAAAATC
ATGGAACTGTTTCTTCAGAATTACAAGAGCAACACCATGTACCACGGGGT
AACTGGGATCAGGAATACGCTGCAGCTTCACCAGGAGTCGAGCGGACTGC
TTCATCCTTTACCGAGGCAAATTGGGACAAACACGCCAGTAGAGCTGTCG
TCTCGGACTCACTAGAGCAATCCAGGGTGACACACAGTCAACTATGGGGC
AACTGGGACCAAGACTACGGTGCCCCGTCAGGACCTAGCTGGACAAGTTC
GGTTCCTATTCTTATGTCGTTACAAGTCTGAATGGATCTTTTATCAGCTT
TGGGCGTAATAAGGTCCGCAACAACAGAAAGTCTTGAGAAACACCATCAA
GAAGTGTTGGAAACTCTGGAGGACTTAAGGAGGCGATTGAGCCCCTTTCT
AGGCAACCACGCCAGACGTGAATCGGTCGAGTCTGATCATTCAGTTTATT
CTGCGCATAGCTCAGATCAGCTCAGCCCCACTAGCGAGTCCGAAAGCGAG
AGCCGTACTGAGAGCTGCGAATCTTCTACATCAGACAGCCACGTTTATGG
AGAGACCGAGAGCGATACATCTACGGGGCATGCCTCCGGTATAGGAATGC
CAACTGGTTCTATATCACATTCGTCATGCCAACCGTCGCAATGGCCCATG
AAATTACTTGCGACAGTTGCCGACGACATCCGTTGGCTGTATGACTACTC
GCGGGAAGGTTCGACAACGGCTGCTATTCGAAACAAGAGAAACAAAACAA
CTGATGAAAGAATCAATGATATCCTGAGAGTGGAAGGCAAGCGAGGGCGT
CCATCAAACGAAGACAAGATTTTCAGAGCTTTAGCCCAGAGGTCCATGGG
CACTCAATTCACGGAAATCCAGCGTGAGAATAAGAACCCTAAGTTGCAGA
CAAGGGTAGATGAACTGGTTGAAAGCATTTGTTCGTCCGACCACGAATTG
AGAAAGCGAATACACAAAAGGTCAAACCTTATCTCCAAGCACCTTCATCG
ATTCGACCACGATCCCGATGACAGGAATATATTGTCACGGGGCATAAATG
CTGGGTTCAAGCGATTGGTGGTAGAAAGGTTATTCGCGCAACGACTGGAG
GGATCTGGTCGCCCTACTGAGCCAATTGGAATATCAGCCTTCACAGCCCT
TGGAGTCACTGCTTTTGACCGTCTACTCTACGAAGATATTCCCTATTTCC
TGGATGAATTATTTAGTTGTGAAGTGGAATTACCTCTGAACTCGTCACAA
GGCGGCCTTAGGACTGAAGCTGTTCAGCTTCCAGATGCTTTGGTCGCTTT
ATCGTCATGGTTCAATAAGTTGCAAACTGATTACGACGGTGACATCAAAC
CTCACGCGACATCAATGGGTAATGCTGCTTTACAAGATGAACAGCGATCT
CGAAAACGGCATTGTAGACCACGGGTGGATGCCGCGCTATTATACCAACC
GGTCGAAAGCTTTGCTTCAAGATACAATAACGCTGACGTTGGGGGACGTC
CAGTTCCCTGCAATGCAGGTTCGTCTACGCAGTCGACGCAGCAGATTGTC
AACGCTTCAACAGAAGCGACTGTCACATTACCCGAAGTTTCTGCGATGTC
TGAATCGCGATTGCCAACGGATCGTCCTTGCTCTCTAGGTAATTGGGACA
GAGACTACGGTGTTTTGTCAATGCAAACTGTACAGGTTCCTCCTACGGTT
TCCGTTTGGGGCAATCGTGACAGAGTCCACAGAGATGTCACATCCTCCAG
CATGAATAAGCAGCGAAGCTTAACAGGTTTCAATTCATGGGGGAATTGGG
ATCAAGACTATGACATTGCCTCAATTGGAACTGAACAGACAACATCATTA
ACTTTTCCATATGGGAATTGGGATCAAAATCATGGAACTGTTTCTTCAGA
ATTACAAGAGCAACACCATGTACCACGGGGTAACTGGGATCAGGAATACG
CTGCAGCTTCACCAGGAGTCGAGCGGACTGCTTCATCCTTTACCGAGGCA
AATTGGGACAAACACGCCAGTAGAGCTGTCGTCTCGGACTCACTAGAGCA
ATCCAGGGTGACACACAGTCAACTATGGGGCAACTGGGACCAAGACTACG
GTGCCCCGTCAGGACCTAGCTGGACAAGTTCGGTTCCTATTCTTATGTCG
TTACAAGTCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000086-T1.utr5p1 | KJC3_000086-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000086-T1.utr3p1 | KJC3_000086-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
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| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| JC15F | supercontig | JC15F:135968..138865 + |
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