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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC15F:158052..159758- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000088-T1 ID=KJC3_000088-T1|Name=KJC3_000088-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1707bp|location=Sequence derived from alignment at JC15F:158052..159758- (Aspergillus niger KJC3)
CGGTATCCCGCCTGGCAGATTCGGAGGGACCAGAAAGTTTACTGACCCAA
TCATACATTGACTTCAGAATTAGAAAGCCGACTACTATGTTGTTAACTAT
ATACTGGCTCCTGGCTCTCCCGGCCGGCATCCCACACAGAGGATTAACAA
GCATGCATCACTGTCGAGGCGGTCTGGCCTTATAGATGGGTCGACGTACT
TCTTTCCATGCGCTGTCTGTTCTCACAGGCTATTTATTGATGCTCTAATA
CGTGCTTGGGCTGCTTTATTCCTTCCATGATGCTGTGAGTTTATGCTATT
TAACTTATCGTCCGAATTTGGAGCAAGTGATAAGGCCGCAGGGCCACACA
GGAGCACTTGAATCCAGTCAGAATTTTACCGGGTAGACCCTGACCAACTA
TTCTTAATCATTCAACGATATGTATCTTCCAGCAGAGATAATTGACCTTG
TATGATTTGTGACAGTCCAACTCTGCGCCACTACTGAATGTTTTCTTGGG
CAGGTTATGTTTTATGTCGAGATCGACACTTCGCAATCGTCAAAAATATC
GGCTGCTCGGGCGTTTCGCATAATGAACAATAACAGCCGGATAACTCTGG
CTAAATTACGCTTGGTTAACAGAACCTTTTGTCATTGTGCGTCAGCCCGT
CTGTTCCGACATATTATAGCTGTAGCCGATTCGTCATACCACACCGCTCC
CTTGCCATCCTTAGGAAGGTTGGTGAACCTTTCCAACAGCCCATATGCCC
AATATGTGCGCCAAGTCGACATTGGATACGGCTCCTTCCCATATTCGATA
GAGGATGTTACGTCATATACGGTAGATCTTGCCGGTTTGCTGTCTTCATG
CTTGCGTCAATTTTCAAATCTCCAAGCTCTCGATTTCCGTGGTCCGCCAT
TGGCCTCCTTATCCCATTATAGGATGAAGGCATCCATCGACCCGATATAC
ATGTCGTTGTGCTACGTGCCTCTGCCAAACTTGACAGAACTTGAACTTCA
GTTACCAATGACGAATGATTTTGCTCCATTGTTTCCCGAGAATAGCAGCA
CATTGCGGATCCCGATTGAACAGATTCTCAACCGCCTGCAATATCTTGGA
TTGCATGTCTATGCGCAGACAAACCAGCAATCCCATGCTTATCATTTTTC
GAGGATCGTCGAGCTTTCGACAAGCCTGACTTCTCTCTCAATCAGCAGCA
CAAACTATCTGAGTATTGATTGTCTCAGACTCGGCCCGGCGGTTCGTCTG
CGGTTTTTATCCTTGCATAAAGTGAAAATTTCATCTCAAATTCTCATCAA
TGTGATTGAGCAATGTACTGAGTCGATGCAGTATATTGAGTTAAGGCAGG
TGAAGATCGAGTCTAGCGCGTGGAGAGAAATTCTGTCCGCAATGGATAGT
TTACCCTATCTATATGACTTTGACATATCTGTTGGCGAGACTCCCATAAG
AAGCGAGAGGTTTCATTCGCCTCCACCGCTGTTTTTTGCAGAGAATATAC
AAGACCTCGGATTGTCTGGGCTCGATCTTGTTGCGTTTATAAATCTCAAA
AAAAAGGTAAAATTGAAACGAGGCGTTCCTCGGCATTTCAGCTACTGAAT
ATGGTCCTTCTGTAGCACTTTGACGATCGCGTGTGGAGAATGGAGACACA
TACTGTCCTCAATGGCTGGTTTACTCTATTTAAATGACTTTGACACATCT
ACTTGGC back to topCoding sequence (CDS) from alignment at JC15F:158052..159758- >KJC3_000088-T1 ID=KJC3_000088-T1|Name=KJC3_000088-T1|organism=Aspergillus niger KJC3|type=CDS|length=2250bp|location=Sequence derived from alignment at JC15F:158052..159758- (Aspergillus niger KJC3)
GTTATGTTTTATGTCGAGATCGACACTTCGCAATCGTCAAAAATATCGGC
TGCTCGGGCGTTTCGCATAATGAACAATAACAGCCGGATAACTCTGGCTA
AATTACGCTTGGTTAACAGAACCTTTTGTCATTGTGCGTCAGCCCGTCTG
TTCCGACATATTATAGCTGTAGCCGATTCGTCATACCACACCGCTCCCTT
GCCATCCTTAGGAAGGTTGGTGAACCTTTCCAACAGCCCATATGCCCAAT
ATGTGCGCCAAGTCGACATTGGATACGGCTCCTTCCCATATTCGATAGAG
GATGTTACGTCATATACGGTAGATCTTGCCGGTTTGCTGTCTTCATGCTT
GCGTCAATTTTCAAATCTCCAAGCTCTCGATTTCCGTGGTCCGCCATTGG
CCTCCTTATCCCATTATAGGATGAAGGCATCCATCGACCCGATATACATG
TCGTTGTGCTACGTGCCTCTGCCAAACTTGACAGAACTTGAACTTCAGTT
ACCAATGACGAATGATTTTGCTCCATTGTTTCCCGAGAATAGCAGCACAT
TGCGGATCCCGATTGAACAGATTCTCAACCGCCTGCAATATCTTGGATTG
CATGTCTATGCGCAGACAAACCAGCAATCCCATGCTTATCATTTTTCGAG
GATCGTCGAGCTTTCGACAAGCCTGACTTCTCTCTCAATCAGCAGCACAA
ACTATCTGAGTATTGATTGTCTCAGACTCGGCCCGGCGGTTCGTCTGCGG
TTTTTATCCTTGCATAAAGTGAAAATTTCATCTCAAATTCTCATCAATGT
GATTGAGCAATGTACTGAGTCGATGCAGTATATTGAGTTAAGGCAGGTGA
AGATCGAGTCTAGCGCGTGGAGAGAAATTCTGTCCGCAATGGATAGTTTA
CCCTATCTATATGACTTTGACATATCTGTTGGCGAGACTCCCATAAGAAG
CGAGAGGTTTCATTCGCCTCCACCGCTGTTTTTTGCAGAGAATATACAAG
ACCTCGGATTGTCTGGGCTCGATCTTGTTGCGTTTATAAATCTCAAAAAA
AAGGTAAAATTGAAACGAGGCGTTCCTCGGCATTTCAGCTACTGAATGTA
TCTTCCAGCAGAGATAATTGACCTTGTTATGTTTTATGTCGAGATCGACA
CTTCGCAATCGTCAAAAATATCGGCTGCTCGGGCGTTTCGCATAATGAAC
AATAACAGCCGGATAACTCTGGCTAAATTACGCTTGGTTAACAGAACCTT
TTGTCATTGTGCGTCAGCCCGTCTGTTCCGACATATTATAGCTGTAGCCG
ATTCGTCATACCACACCGCTCCCTTGCCATCCTTAGGAAGGTTGGTGAAC
CTTTCCAACAGCCCATATGCCCAATATGTGCGCCAAGTCGACATTGGATA
CGGCTCCTTCCCATATTCGATAGAGGATGTTACGTCATATACGGTAGATC
TTGCCGGTTTGCTGTCTTCATGCTTGCGTCAATTTTCAAATCTCCAAGCT
CTCGATTTCCGTGGTCCGCCATTGGCCTCCTTATCCCATTATAGGATGAA
GGCATCCATCGACCCGATATACATGTCGTTGTGCTACGTGCCTCTGCCAA
ACTTGACAGAACTTGAACTTCAGTTACCAATGACGAATGATTTTGCTCCA
TTGTTTCCCGAGAATAGCAGCACATTGCGGATCCCGATTGAACAGATTCT
CAACCGCCTGCAATATCTTGGATTGCATGTCTATGCGCAGACAAACCAGC
AATCCCATGCTTATCATTTTTCGAGGATCGTCGAGCTTTCGACAAGCCTG
ACTTCTCTCTCAATCAGCAGCACAAACTATCTGAGTATTGATTGTCTCAG
ACTCGGCCCGGCGGTTCGTCTGCGGTTTTTATCCTTGCATAAAGTGAAAA
TTTCATCTCAAATTCTCATCAATGTGATTGAGCAATGTACTGAGTCGATG
CAGTATATTGAGTTAAGGCAGGTGAAGATCGAGTCTAGCGCGTGGAGAGA
AATTCTGTCCGCAATGGATAGTTTACCCTATCTATATGACTTTGACATAT
CTGTTGGCGAGACTCCCATAAGAAGCGAGAGGTTTCATTCGCCTCCACCG
CTGTTTTTTGCAGAGAATATACAAGACCTCGGATTGTCTGGGCTCGATCT
TGTTGCGTTTATAAATCTCAAAAAAAAGGTAAAATTGAAACGAGGCGTTC
CTCGGCATTTCAGCTACTGAATGTATCTTCCAGCAGAGATAATTGACCTT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000088-T1.utr3p1 | KJC3_000088-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000088-T1.utr5p1 | KJC3_000088-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032675 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC15F | supercontig | JC15F:158052..159758 - |
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