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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC16F:15222..18478+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000109-T1 ID=KJC3_000109-T1|Name=KJC3_000109-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3257bp|location=Sequence derived from alignment at JC16F:15222..18478+ (Aspergillus niger KJC3)
ATGGCGGAGGGCGGAGTTCTCCTCGTTCAGCCCGAGCACCTCTTATCTCT
GAAGCTGATGTGTCTCGAGTGCTTTATCACAGGGAGAGAGGCGGTTGGTG
TATGTCTTCTGCGAATTCTGGATTTCTTCAGGACCTCCTCGCGACACGTG
GTGGATGAAAGCGATGAGAACTTCAGTGTGAAGTTCGAGCTGATCTACAC
GATGGGGACCCAGCGTCCGTTGGAGCTCAGTCCACAGAGGTGGACTTTAA
TCCAAGAGATGCTCGGCCTGGTGAGGAAGTATGCTCCAGTTATCAAGATG
CAGTTCCCGCGGTCAATTGAGGTGGAGGAGCCGCATCCAGGAAGTTTCCC
CAGGATACGGTTGCTCCGAGCGGATGCCGTCCATCAGCTGTTTGAACGGA
TTGCGGATCATATTTTCCATAACGGTATTGACAAACTGCCAATTTCAAGG
CAGCCAGAAGCACAACGACGCGCGGCGATCGCTTATTGCCTTAACCCTGA
CCCGTTACCACTGCAGATTGCTGCAGTTGAAACCCCAGATGCGTCTGGCT
TAGGGAACGACAGCACGAGGGATCCTCTGCTACTACTCCGGGGTCTGCTG
GCTGGCAACGTTCTGGCATTCTGCCTGGGACAAAGACGCTGGCGAGTCAA
CTATGGACTTGATCGCTGCCGACAACCCCCCACAAGGCTGGCAGTTCCGT
ATCGTGCCAAGGATAATCCGGCACCACGGGCGGAATTCAGTCATCCCGAT
GTTGTCATTGTACTGACGTGCCTGAGCTATTACTATGAGGGACTCCGCGA
CGAGGACCTATTTCGAGCATTCGACCATCTGGTCGGATCGGATCAAGCTG
ACGCGGAGTATCAAATATGGGTCGATGATGCCCCGACTCTCCCCCCGGCC
TATCGTCAATTGCTGGGCATTAATCTCCAGGACCGGCTCCATTGCGTGGA
ATGCATTTTCCCCTGTCTTCGGTTCGCGAAGGGAGCCATTGATTACTTCC
TGGCTCATATTATTTTCACCAAAGGCCTAAGGGAGTTTCCGAGTAAATTA
TCTTCGTCCGGATGGGATATCGGTGAGGTCAAGTGCCATCCCACCGTCGG
CTTTAGCGGGACCAACGATTCCCGTGTCACCCTTCCGCTCAGTGTGGAGC
AGCTGGATCTACCTGACCAGAACCACACCAATGTGTTAGTTCTCGAATAT
CTTCTCCGACCCGAGACTGGCATTGCCCTGATTCCGACCCGAGATGACCT
GTCCAAGTCAGATGCGCAGGTCCTTCTGGATATGGTGGCGGAACTGGGTT
CACCCGTACGCGTGATTCTGGACGTTGGAGCTCGCATATTAGAGCTGAGT
AACCTGGATGTTGCGAAGACCTGGTTGGAGATGGTCAGTGATGATTGTCG
AACGCAGGCCGTGGTCTTTATCAACGACGACGACGATATCGCCGTGGTAG
ATCGGACCGGACTCGTCGAACCGCTGCAGACGTCACCTTTCAAAAGGCAC
CTCGATCTATGCCTTGTGTTCCTTGACGAAGCACATACGAGAGGGATTGA
TCTGAAGCTACCCCTGAATTACCGGGCGGCGGTGACGCTGGGACCGAACA
TCACAAAAGACAAGCTGGTTCAAGGTCAGGGACCCCCGCTGGAACAGTCA
TATGCACTTCTCACTAACGGCTATTCACAGCATGCATGAGAATGAGAAAT
TTAGGGAGAGGACAATCGGTCGTGTTTTGCGTACCGGAAGAGATCAAGTT
CAAGATTCTGACCCTCTGTGGGAGGACCCACCATTCTGAACTCACCGTAG
CAGACGTGCTTTGCTGGGCAATTTCAGAGACCTGGGACGATATGCAACGC
AGCATACCTTTGTGGGCAGTGCAGGGAAACCGATATCAGGCCCAGGCCCG
TCAGTGGCTGGTTCTGCGACAGGACGGGCAAACCTCGATATCAACATCTA
AGGCAGAGGGGTTTCTGGAACCGGAATCCCAGTCCCTTGAACGGCGGTAT
AGACCCGGTTGTAATAATGTCCTTTCTCTTTCTTCCAAATGCCCTGATGA
TGCGGACTCGCGGCGCATACTGGACCGATGCCGTGAGTTTGCAACTGTGA
AGTTCTCTGCAGCGCAACTCCAGGAAGAGCAGGAGCGAGAACTAGCACCA
GAGATTGAGCAAGAACGACAAGTTCAACGTCCGGCTCCTGCCGAACCGGA
AACGCATTCTGTACATCCTGATATACTCTTGTTCGTGGCCACTGGACACC
TGGATGCATCATCCGCCGCCGTGAAACCAGCTTTTATGGTGTTAAAAGAT
ACATCAGCGGCAAGATACCTGGATGTGGCCCAGTTCCCATCGGAGCTCCT
TGTCACCATTGATTTTGCGAGAACAGTCCGACTGCCTAAATTATCTGCCC
GGGATAGTTATCAGCGTGCGGTGGAATGGGTCCTGATGAGCACCGGCCAT
CCCTCCGAGGACGGAAAGCCCGTAGGGCACATGGTGATCATCAGCCCGTA
TGAAGCGGACAAACTTCATGCTGACATTCGCGGGTCTAGCGCAGTAACGC
TGCATGTATACGCACCTCGGCAGAACCAGAGTTCGTATCCTATCGACAAG
CTCGATCTGTACACGATTCCGAAAAAATCAAGCACAAGGCCCCGGCGAGT
CCCTGAGAGCCTACGCATTCAACTGAACCTCTTTGCGGGCCAGCTCTATA
TTTCGTCGTACAACGAGTATTGTGAGATATGCCGCTTTCTGGGAGTTGCG
TTTACTGCCGCACCAGGGGGCTTGGTTGTCGCCGCGGATGGGTTCATCGT
GGAGAACCAACAGGCAAGAGCCAAGTTCACCCAAAGCCCCCTCAGGTTTC
TCAAGGTGTTCATGTCACGGATACGGAAGGACGGGCAGGAAATTGACAAG
ACCCACCTTGGGAAGATCCTAGACGGAAAACTCTTACTCATGGCGGACTT
CCAAGATTTCAATGGCAGAGCTAGGACCATGCAGCTGAGCCTTCAAAATG
CCCGATGAGATGTCTCGAGCGAACAGCATGATGGGACGGTAGGGAATGCG
TTTTGATGCCGGGGCAGTCTTCTTTGTGTTTCGGGTGACTGGCGCCTGGC
TTCAGGCTGGACCTGATCAGCTCCCTCTCAATGTAGTAATGTAGTTCTAG
ATTCCTCTTGTCGTAGAGATTTCAAAAGGCAATGCTCTCGAGTTCCTTCC
CGATATTATATTCGTTTTGTTCCCTCGTTATGAGCCTATTCGTGAGGCCT
TTCACGG back to topCoding sequence (CDS) from alignment at JC16F:15222..18478+ >KJC3_000109-T1 ID=KJC3_000109-T1|Name=KJC3_000109-T1|organism=Aspergillus niger KJC3|type=CDS|length=5904bp|location=Sequence derived from alignment at JC16F:15222..18478+ (Aspergillus niger KJC3)
ATGGCGGAGGGCGGAGTTCTCCTCGTTCAGCCCGAGCACCTCTTATCTCT
GAAGCTGATGTGTCTCGAGTGCTTTATCACAGGGAGAGAGGCGGTTGGTG
TATGTCTTCTGCGAATTCTGGATTTCTTCAGGACCTCCTCGCGACACGTG
GTGGATGAAAGCGATGAGAACTTCAGTGTGAAGTTCGAGCTGATCTACAC
GATGGGGACCCAGCGTCCGTTGGAGCTCAGTCCACAGAGGTGGACTTTAA
TCCAAGAGATGCTCGGCCTGGTGAGGAAGTATGCTCCAGTTATCAAGATG
CAGTTCCCGCGGTCAATTGAGGTGGAGGAGCCGCATCCAGGAAGTTTCCC
CAGGATACGGTTGCTCCGAGCGGATGCCGTCCATCAGCTGTTTGAACGGA
TTGCGGATCATATTTTCCATAACGGTATTGACAAACTGCCAATTTCAAGG
CAGCCAGAAGCACAACGACGCGCGGCGATCGCTTATTGCCTTAACCCTGA
CCCGTTACCACTGCAGATTGCTGCAGTTGAAACCCCAGATGCGTCTGGCT
TAGGGAACGACAGCACGAGGGATCCTCTGCTACTACTCCGGGGTCTGCTG
GCTGGCAACGTTCTGGCATTCTGCCTGGGACAAAGACGCTGGCGAGTCAA
CTATGGACTTGATCGCTGCCGACAACCCCCCACAAGGCTGGCAGTTCCGT
ATCGTGCCAAGGATAATCCGGCACCACGGGCGGAATTCAGTCATCCCGAT
GTTGTCATTGTACTGACGTGCCTGAGCTATTACTATGAGGGACTCCGCGA
CGAGGACCTATTTCGAGCATTCGACCATCTGGTCGGATCGGATCAAGCTG
ACGCGGAGTATCAAATATGGGTCGATGATGCCCCGACTCTCCCCCCGGCC
TATCGTCAATTGCTGGGCATTAATCTCCAGGACCGGCTCCATTGCGTGGA
ATGCATTTTCCCCTGTCTTCGGTTCGCGAAGGGAGCCATTGATTACTTCC
TGGCTCATATTATTTTCACCAAAGGCCTAAGGGAGTTTCCGAGTAAATTA
TCTTCGTCCGGATGGGATATCGGTGAGGTCAAGTGCCATCCCACCGTCGG
CTTTAGCGGGACCAACGATTCCCGTGTCACCCTTCCGCTCAGTGTGGAGC
AGCTGGATCTACCTGACCAGAACCACACCAATGTGTTAGTTCTCGAATAT
CTTCTCCGACCCGAGACTGGCATTGCCCTGATTCCGACCCGAGATGACCT
GTCCAAGTCAGATGCGCAGGTCCTTCTGGATATGGTGGCGGAACTGGGTT
CACCCGTACGCGTGATTCTGGACGTTGGAGCTCGCATATTAGAGCTGAGT
AACCTGGATGTTGCGAAGACCTGGTTGGAGATGGTCAGTGATGATTGTCG
AACGCAGGCCGTGGTCTTTATCAACGACGACGACGATATCGCCGTGGTAG
ATCGGACCGGACTCGTCGAACCGCTGCAGACGTCACCTTTCAAAAGGCAC
CTCGATCTATGCCTTGTGTTCCTTGACGAAGCACATACGAGAGGGATTGA
TCTGAAGCTACCCCTGAATTACCGGGCGGCGGTGACGCTGGGACCGAACA
TCACAAAAGACAAGCTGGTTCAAGCATGCATGAGAATGAGAAATTTAGGG
AGAGGACAATCGGTCGTGTTTTGCGTACCGGAAGAGATCAAGTTCAAGAT
TCTGACCCTCTGTGGGAGGACCCACCATTCTGAACTCACCGTAGCAGACG
TGCTTTGCTGGGCAATTTCAGAGACCTGGGACGATATGCAACGCAGCATA
CCTTTGTGGGCAGTGCAGGGAAACCGATATCAGGCCCAGGCCCGTCAGTG
GCTGGTTCTGCGACAGGACGGGCAAACCTCGATATCAACATCTAAGGCAG
AGGGGTTTCTGGAACCGGAATCCCAGTCCCTTGAACGGCGGTATAGACCC
GGTTGTAATAATGTCCTTTCTCTTTCTTCCAAATGCCCTGATGATGCGGA
CTCGCGGCGCATACTGGACCGATGCCGTGAGTTTGCAACTGTGAAGTTCT
CTGCAGCGCAACTCCAGGAAGAGCAGGAGCGAGAACTAGCACCAGAGATT
GAGCAAGAACGACAAGTTCAACGTCCGGCTCCTGCCGAACCGGAAACGCA
TTCTGTACATCCTGATATACTCTTGTTCGTGGCCACTGGACACCTGGATG
CATCATCCGCCGCCGTGAAACCAGCTTTTATGGTGTTAAAAGATACATCA
GCGGCAAGATACCTGGATGTGGCCCAGTTCCCATCGGAGCTCCTTGTCAC
CATTGATTTTGCGAGAACAGTCCGACTGCCTAAATTATCTGCCCGGGATA
GTTATCAGCGTGCGGTGGAATGGGTCCTGATGAGCACCGGCCATCCCTCC
GAGGACGGAAAGCCCGTAGGGCACATGGTGATCATCAGCCCGTATGAAGC
GGACAAACTTCATGCTGACATTCGCGGGTCTAGCGCAGTAACGCTGCATG
TATACGCACCTCGGCAGAACCAGAGTTCGTATCCTATCGACAAGCTCGAT
CTGTACACGATTCCGAAAAAATCAAGCACAAGGCCCCGGCGAGTCCCTGA
GAGCCTACGCATTCAACTGAACCTCTTTGCGGGCCAGCTCTATATTTCGT
CGTACAACGAGTATTGTGAGATATGCCGCTTTCTGGGAGTTGCGTTTACT
GCCGCACCAGGGGGCTTGGTTGTCGCCGCGGATGGGTTCATCGTGGAGAA
CCAACAGGCAAGAGCCAAGTTCACCCAAAGCCCCCTCAGGTTTCTCAAGG
TGTTCATGTCACGGATACGGAAGGACGGGCAGGAAATTGACAAGACCCAC
CTTGGGAAGATCCTAGACGGAAAACTCTTACTCATGGCGGACTTCCAAGA
TTTCAATGGCAGAGCTAGGACCATGCAGCTGAGCCTTCAAAATGCCCGAT
GAATGGCGGAGGGCGGAGTTCTCCTCGTTCAGCCCGAGCACCTCTTATCT
CTGAAGCTGATGTGTCTCGAGTGCTTTATCACAGGGAGAGAGGCGGTTGG
TGTATGTCTTCTGCGAATTCTGGATTTCTTCAGGACCTCCTCGCGACACG
TGGTGGATGAAAGCGATGAGAACTTCAGTGTGAAGTTCGAGCTGATCTAC
ACGATGGGGACCCAGCGTCCGTTGGAGCTCAGTCCACAGAGGTGGACTTT
AATCCAAGAGATGCTCGGCCTGGTGAGGAAGTATGCTCCAGTTATCAAGA
TGCAGTTCCCGCGGTCAATTGAGGTGGAGGAGCCGCATCCAGGAAGTTTC
CCCAGGATACGGTTGCTCCGAGCGGATGCCGTCCATCAGCTGTTTGAACG
GATTGCGGATCATATTTTCCATAACGGTATTGACAAACTGCCAATTTCAA
GGCAGCCAGAAGCACAACGACGCGCGGCGATCGCTTATTGCCTTAACCCT
GACCCGTTACCACTGCAGATTGCTGCAGTTGAAACCCCAGATGCGTCTGG
CTTAGGGAACGACAGCACGAGGGATCCTCTGCTACTACTCCGGGGTCTGC
TGGCTGGCAACGTTCTGGCATTCTGCCTGGGACAAAGACGCTGGCGAGTC
AACTATGGACTTGATCGCTGCCGACAACCCCCCACAAGGCTGGCAGTTCC
GTATCGTGCCAAGGATAATCCGGCACCACGGGCGGAATTCAGTCATCCCG
ATGTTGTCATTGTACTGACGTGCCTGAGCTATTACTATGAGGGACTCCGC
GACGAGGACCTATTTCGAGCATTCGACCATCTGGTCGGATCGGATCAAGC
TGACGCGGAGTATCAAATATGGGTCGATGATGCCCCGACTCTCCCCCCGG
CCTATCGTCAATTGCTGGGCATTAATCTCCAGGACCGGCTCCATTGCGTG
GAATGCATTTTCCCCTGTCTTCGGTTCGCGAAGGGAGCCATTGATTACTT
CCTGGCTCATATTATTTTCACCAAAGGCCTAAGGGAGTTTCCGAGTAAAT
TATCTTCGTCCGGATGGGATATCGGTGAGGTCAAGTGCCATCCCACCGTC
GGCTTTAGCGGGACCAACGATTCCCGTGTCACCCTTCCGCTCAGTGTGGA
GCAGCTGGATCTACCTGACCAGAACCACACCAATGTGTTAGTTCTCGAAT
ATCTTCTCCGACCCGAGACTGGCATTGCCCTGATTCCGACCCGAGATGAC
CTGTCCAAGTCAGATGCGCAGGTCCTTCTGGATATGGTGGCGGAACTGGG
TTCACCCGTACGCGTGATTCTGGACGTTGGAGCTCGCATATTAGAGCTGA
GTAACCTGGATGTTGCGAAGACCTGGTTGGAGATGGTCAGTGATGATTGT
CGAACGCAGGCCGTGGTCTTTATCAACGACGACGACGATATCGCCGTGGT
AGATCGGACCGGACTCGTCGAACCGCTGCAGACGTCACCTTTCAAAAGGC
ACCTCGATCTATGCCTTGTGTTCCTTGACGAAGCACATACGAGAGGGATT
GATCTGAAGCTACCCCTGAATTACCGGGCGGCGGTGACGCTGGGACCGAA
CATCACAAAAGACAAGCTGGTTCAAGCATGCATGAGAATGAGAAATTTAG
GGAGAGGACAATCGGTCGTGTTTTGCGTACCGGAAGAGATCAAGTTCAAG
ATTCTGACCCTCTGTGGGAGGACCCACCATTCTGAACTCACCGTAGCAGA
CGTGCTTTGCTGGGCAATTTCAGAGACCTGGGACGATATGCAACGCAGCA
TACCTTTGTGGGCAGTGCAGGGAAACCGATATCAGGCCCAGGCCCGTCAG
TGGCTGGTTCTGCGACAGGACGGGCAAACCTCGATATCAACATCTAAGGC
AGAGGGGTTTCTGGAACCGGAATCCCAGTCCCTTGAACGGCGGTATAGAC
CCGGTTGTAATAATGTCCTTTCTCTTTCTTCCAAATGCCCTGATGATGCG
GACTCGCGGCGCATACTGGACCGATGCCGTGAGTTTGCAACTGTGAAGTT
CTCTGCAGCGCAACTCCAGGAAGAGCAGGAGCGAGAACTAGCACCAGAGA
TTGAGCAAGAACGACAAGTTCAACGTCCGGCTCCTGCCGAACCGGAAACG
CATTCTGTACATCCTGATATACTCTTGTTCGTGGCCACTGGACACCTGGA
TGCATCATCCGCCGCCGTGAAACCAGCTTTTATGGTGTTAAAAGATACAT
CAGCGGCAAGATACCTGGATGTGGCCCAGTTCCCATCGGAGCTCCTTGTC
ACCATTGATTTTGCGAGAACAGTCCGACTGCCTAAATTATCTGCCCGGGA
TAGTTATCAGCGTGCGGTGGAATGGGTCCTGATGAGCACCGGCCATCCCT
CCGAGGACGGAAAGCCCGTAGGGCACATGGTGATCATCAGCCCGTATGAA
GCGGACAAACTTCATGCTGACATTCGCGGGTCTAGCGCAGTAACGCTGCA
TGTATACGCACCTCGGCAGAACCAGAGTTCGTATCCTATCGACAAGCTCG
ATCTGTACACGATTCCGAAAAAATCAAGCACAAGGCCCCGGCGAGTCCCT
GAGAGCCTACGCATTCAACTGAACCTCTTTGCGGGCCAGCTCTATATTTC
GTCGTACAACGAGTATTGTGAGATATGCCGCTTTCTGGGAGTTGCGTTTA
CTGCCGCACCAGGGGGCTTGGTTGTCGCCGCGGATGGGTTCATCGTGGAG
AACCAACAGGCAAGAGCCAAGTTCACCCAAAGCCCCCTCAGGTTTCTCAA
GGTGTTCATGTCACGGATACGGAAGGACGGGCAGGAAATTGACAAGACCC
ACCTTGGGAAGATCCTAGACGGAAAACTCTTACTCATGGCGGACTTCCAA
GATTTCAATGGCAGAGCTAGGACCATGCAGCTGAGCCTTCAAAATGCCCG
ATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000109-T1.utr3p1 | KJC3_000109-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022099 |
| DBxref | InterPro:IPR022105 |
| DBxref | PFAM:PF12359 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC16F | supercontig | JC16F:15222..18478 + |
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