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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:286855..288971+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000222-T1 ID=KJC3_000222-T1|Name=KJC3_000222-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2117bp|location=Sequence derived from alignment at ch1:286855..288971+ (Aspergillus niger KJC3)
ATGGCTGGATCCATCGCCCTCAACACGCGAGACACTATCATTGAAATCCG
GGTGCGCCAACCCGACGCTCTCCCGCCACCTACCAGCACTACTACTTCTA
CTACTCCTCGCATTGAGGAGGTGGAGGAAGAGTCGATTGAACCGCATCAA
GTTCCTGGGGAATGGCCCGATGTTCCCGTTCCTGTTGCCAGACCCCGGGA
AGGACTGGAACGCAACGCCAGCCGACGCAGCCGTACCAGGCGGCTCAGCC
AGCGTCTCAGTGTCTCCAGCGATATCTTCCACGATGCGATTGAGGCCCAG
GGCTATGGCGCAGCAGGCGCAGGATCCAAGCGTCTGAGTGGGATATACCG
TCACTCCATCATTGAGGACTCAGTTGAAGCCCTGGGTCTTACAGAACCGA
CCGAGCAACTGAAGGTCGAAGAGCAGGAGGAACCACCCACCAAGACCAAA
TACGGACCCCGAATCTGGGCCATCATGGTGGCACTGTGTGTGACGAATCT
GCTGGTTGCGTTGGAAGGAACAGTCATCTCGACGGCGCTGCCGACCATTG
TGGAGGACCTGGGCGGCGGCGAAGCGTATGTCTGGGCTTCGACTGGATAT
TTCCTCACCAAGTAAGTTGCACGGTTATATTACTGTCGTCATGGATGCTA
ATAGCTTATAGTACCGTCTTTCAACCGCTGTATGGGCAGATGGCCGACAT
CTTTGGCCGGCGATGGCTGATCATCTTCGCGGTAGCCATGTTTGTGCTGG
GCAGCGGCATCAGCGGCGGCGCACCGAGCATGAACGCCCTCATTGCCGGT
CGCGTCATCCAGGGCATCGGAGGTGGTGGTATTACACTGTTGGTGAACCT
GATTGTGTGTGATCTGGTGCCCTTGCGCGAACGTGGTCGTCTTATGGCCA
TTGTTTTCGCGGCCGTCTCCGTTGGCACCTCGCTGGGCCCCATCGTCGGA
GGACTGATCGTGCAACAAACCACCTGGCGCTGGGTCTTCTATCTCAACCT
GCCAGTCGGAGGTATTTCCATGGTATTGTTGTTTGTCTTCCTGCAAGTTG
GTCATCGCAGCGAAGAAACCTCTATCAAGCGCCGCCTGAAGCAAATCGAC
TATGGCGGCAACCTCATCTTCATCCTGGCCATCTCATTCATTCTGGTCGC
TCTGGCGTATGGTGGCACACTGTGGCCGTGGAAGTCATACTCGACTATTA
TCTCGCTGGTCTTTGGTCTCTATGGAGTCGTTGTGTTTATCTTCTACGAA
CAGAGCAACTTCTGTCGACAGCCCACGCTGCCCATGCGTCTCTTCACGCG
CCGCACCTCAGCCACCGCCTTCACCATCACCTTCATCCAGTCCATGCTCA
CCCTGCTCGTCATCTACTTTCTTCCGGTCTACTTCCAGGCCGTGCTTCTG
GCCTCACCCATTCGGTCAGGTGTGATGATGCTCCCAACAGTACTGGTGTT
GGTACCAGCCTCGGTAGTCAGCGGCGCCCTGCTATCCAAATTTGGTCGCT
ACAAGCCCTTCCACTTTATCGGGTTCGCGCTCTTCACCCTGGGCTTTGGC
TGTTTTATCACGCTGGATGAAAACTCACCAGATGTTGCCTGGATCATGGT
GCAGATCGTCGTGGCCCTGGGATCGGGCTCATCTCTGAGCACACTTCTAC
CCGCTGTGCAAGCCGAGTTTTCGGATCAGGACACCGCGGCTGCTACAGCG
GCATGGGCCTTTGTGCGCCAGTTTGGTGTGGTCTGGGGTGTATCGGTGCC
GTCGGCAATTTTTAATGCGCAGGTGCAACACGATCTGTCGCGGGTCAGCA
GTGACAGTGTCCAGAAGACGCTCAGTGGTGGAGCAGCCTACGAGCATGGT
ACTAAAGACTACGTCAACTCGCTTAGTGGGGATGTGCGAAAGCAGGTCAT
TGGATTGTACGCAGACAGCTTACAGATAGTGTGGATTTTCGCGACTGTAA
TCGCAGGAGTTGGATTTTTGTTGGTGTTCTTGGAACGGTAAGTCGATCTT
GTGGCAGTGTACATTCGGATGGATGCTAATGGCTACAGTGAAATTACGCT
GCGGACGAAGCTGGACACCAAGTATGGATTGAAGGAGGAGAAAACGGCGG
ACTCATCTAATGCATAA back to topCoding sequence (CDS) from alignment at ch1:286855..288971+ >KJC3_000222-T1 ID=KJC3_000222-T1|Name=KJC3_000222-T1|organism=Aspergillus niger KJC3|type=CDS|length=6048bp|location=Sequence derived from alignment at ch1:286855..288971+ (Aspergillus niger KJC3)
ATGGCTGGATCCATCGCCCTCAACACGCGAGACACTATCATTGAAATCCG
GGTGCGCCAACCCGACGCTCTCCCGCCACCTACCAGCACTACTACTTCTA
CTACTCCTCGCATTGAGGAGGTGGAGGAAGAGTCGATTGAACCGCATCAA
GTTCCTGGGGAATGGCCCGATGTTCCCGTTCCTGTTGCCAGACCCCGGGA
AGGACTGGAACGCAACGCCAGCCGACGCAGCCGTACCAGGCGGCTCAGCC
AGCGTCTCAGTGTCTCCAGCGATATCTTCCACGATGCGATTGAGGCCCAG
GGCTATGGCGCAGCAGGCGCAGGATCCAAGCGTCTGAGTGGGATATACCG
TCACTCCATCATTGAGGACTCAGTTGAAGCCCTGGGTCTTACAGAACCGA
CCGAGCAACTGAAGGTCGAAGAGCAGGAGGAACCACCCACCAAGACCAAA
TACGGACCCCGAATCTGGGCCATCATGGTGGCACTGTGTGTGACGAATCT
GCTGGTTGCGTTGGAAGGAACAGTCATCTCGACGGCGCTGCCGACCATTG
TGGAGGACCTGGGCGGCGGCGAAGCGTATGTCTGGGCTTCGACTGGATAT
TTCCTCACCAATACCGTCTTTCAACCGCTGTATGGGCAGATGGCCGACAT
CTTTGGCCGGCGATGGCTGATCATCTTCGCGGTAGCCATGTTTGTGCTGG
GCAGCGGCATCAGCGGCGGCGCACCGAGCATGAACGCCCTCATTGCCGGT
CGCGTCATCCAGGGCATCGGAGGTGGTGGTATTACACTGTTGGTGAACCT
GATTGTGTGTGATCTGGTGCCCTTGCGCGAACGTGGTCGTCTTATGGCCA
TTGTTTTCGCGGCCGTCTCCGTTGGCACCTCGCTGGGCCCCATCGTCGGA
GGACTGATCGTGCAACAAACCACCTGGCGCTGGGTCTTCTATCTCAACCT
GCCAGTCGGAGGTATTTCCATGGTATTGTTGTTTGTCTTCCTGCAAGTTG
GTCATCGCAGCGAAGAAACCTCTATCAAGCGCCGCCTGAAGCAAATCGAC
TATGGCGGCAACCTCATCTTCATCCTGGCCATCTCATTCATTCTGGTCGC
TCTGGCGTATGGTGGCACACTGTGGCCGTGGAAGTCATACTCGACTATTA
TCTCGCTGGTCTTTGGTCTCTATGGAGTCGTTGTGTTTATCTTCTACGAA
CAGAGCAACTTCTGTCGACAGCCCACGCTGCCCATGCGTCTCTTCACGCG
CCGCACCTCAGCCACCGCCTTCACCATCACCTTCATCCAGTCCATGCTCA
CCCTGCTCGTCATCTACTTTCTTCCGGTCTACTTCCAGGCCGTGCTTCTG
GCCTCACCCATTCGGTCAGGTGTGATGATGCTCCCAACAGTACTGGTGTT
GGTACCAGCCTCGGTAGTCAGCGGCGCCCTGCTATCCAAATTTGGTCGCT
ACAAGCCCTTCCACTTTATCGGGTTCGCGCTCTTCACCCTGGGCTTTGGC
TGTTTTATCACGCTGGATGAAAACTCACCAGATGTTGCCTGGATCATGGT
GCAGATCGTCGTGGCCCTGGGATCGGGCTCATCTCTGAGCACACTTCTAC
CCGCTGTGCAAGCCGAGTTTTCGGATCAGGACACCGCGGCTGCTACAGCG
GCATGGGCCTTTGTGCGCCAGTTTGGTGTGGTCTGGGGTGTATCGGTGCC
GTCGGCAATTTTTAATGCGCAGGTGCAACACGATCTGTCGCGGGTCAGCA
GTGACAGTGTCCAGAAGACGCTCAGTGGTGGAGCAGCCTACGAGCATGGT
ACTAAAGACTACGTCAACTCGCTTAGTGGGGATGTGCGAAAGCAGGTCAT
TGGATTGTACGCAGACAGCTTACAGATAGTGTGGATTTTCGCGACTGTAA
TCGCAGGAGTTGGATTTTTGTTGGTGTTCTTGGAACGTGAAATTACGCTG
CGGACGAAGCTGGACACCAAGTATGGATTGAAGGAGGAGAAAACGGCGGA
CTCATCTAATGCATAAATGGCTGGATCCATCGCCCTCAACACGCGAGACA
CTATCATTGAAATCCGGGTGCGCCAACCCGACGCTCTCCCGCCACCTACC
AGCACTACTACTTCTACTACTCCTCGCATTGAGGAGGTGGAGGAAGAGTC
GATTGAACCGCATCAAGTTCCTGGGGAATGGCCCGATGTTCCCGTTCCTG
TTGCCAGACCCCGGGAAGGACTGGAACGCAACGCCAGCCGACGCAGCCGT
ACCAGGCGGCTCAGCCAGCGTCTCAGTGTCTCCAGCGATATCTTCCACGA
TGCGATTGAGGCCCAGGGCTATGGCGCAGCAGGCGCAGGATCCAAGCGTC
TGAGTGGGATATACCGTCACTCCATCATTGAGGACTCAGTTGAAGCCCTG
GGTCTTACAGAACCGACCGAGCAACTGAAGGTCGAAGAGCAGGAGGAACC
ACCCACCAAGACCAAATACGGACCCCGAATCTGGGCCATCATGGTGGCAC
TGTGTGTGACGAATCTGCTGGTTGCGTTGGAAGGAACAGTCATCTCGACG
GCGCTGCCGACCATTGTGGAGGACCTGGGCGGCGGCGAAGCGTATGTCTG
GGCTTCGACTGGATATTTCCTCACCAATACCGTCTTTCAACCGCTGTATG
GGCAGATGGCCGACATCTTTGGCCGGCGATGGCTGATCATCTTCGCGGTA
GCCATGTTTGTGCTGGGCAGCGGCATCAGCGGCGGCGCACCGAGCATGAA
CGCCCTCATTGCCGGTCGCGTCATCCAGGGCATCGGAGGTGGTGGTATTA
CACTGTTGGTGAACCTGATTGTGTGTGATCTGGTGCCCTTGCGCGAACGT
GGTCGTCTTATGGCCATTGTTTTCGCGGCCGTCTCCGTTGGCACCTCGCT
GGGCCCCATCGTCGGAGGACTGATCGTGCAACAAACCACCTGGCGCTGGG
TCTTCTATCTCAACCTGCCAGTCGGAGGTATTTCCATGGTATTGTTGTTT
GTCTTCCTGCAAGTTGGTCATCGCAGCGAAGAAACCTCTATCAAGCGCCG
CCTGAAGCAAATCGACTATGGCGGCAACCTCATCTTCATCCTGGCCATCT
CATTCATTCTGGTCGCTCTGGCGTATGGTGGCACACTGTGGCCGTGGAAG
TCATACTCGACTATTATCTCGCTGGTCTTTGGTCTCTATGGAGTCGTTGT
GTTTATCTTCTACGAACAGAGCAACTTCTGTCGACAGCCCACGCTGCCCA
TGCGTCTCTTCACGCGCCGCACCTCAGCCACCGCCTTCACCATCACCTTC
ATCCAGTCCATGCTCACCCTGCTCGTCATCTACTTTCTTCCGGTCTACTT
CCAGGCCGTGCTTCTGGCCTCACCCATTCGGTCAGGTGTGATGATGCTCC
CAACAGTACTGGTGTTGGTACCAGCCTCGGTAGTCAGCGGCGCCCTGCTA
TCCAAATTTGGTCGCTACAAGCCCTTCCACTTTATCGGGTTCGCGCTCTT
CACCCTGGGCTTTGGCTGTTTTATCACGCTGGATGAAAACTCACCAGATG
TTGCCTGGATCATGGTGCAGATCGTCGTGGCCCTGGGATCGGGCTCATCT
CTGAGCACACTTCTACCCGCTGTGCAAGCCGAGTTTTCGGATCAGGACAC
CGCGGCTGCTACAGCGGCATGGGCCTTTGTGCGCCAGTTTGGTGTGGTCT
GGGGTGTATCGGTGCCGTCGGCAATTTTTAATGCGCAGGTGCAACACGAT
CTGTCGCGGGTCAGCAGTGACAGTGTCCAGAAGACGCTCAGTGGTGGAGC
AGCCTACGAGCATGGTACTAAAGACTACGTCAACTCGCTTAGTGGGGATG
TGCGAAAGCAGGTCATTGGATTGTACGCAGACAGCTTACAGATAGTGTGG
ATTTTCGCGACTGTAATCGCAGGAGTTGGATTTTTGTTGGTGTTCTTGGA
ACGTGAAATTACGCTGCGGACGAAGCTGGACACCAAGTATGGATTGAAGG
AGGAGAAAACGGCGGACTCATCTAATGCATAAATGGCTGGATCCATCGCC
CTCAACACGCGAGACACTATCATTGAAATCCGGGTGCGCCAACCCGACGC
TCTCCCGCCACCTACCAGCACTACTACTTCTACTACTCCTCGCATTGAGG
AGGTGGAGGAAGAGTCGATTGAACCGCATCAAGTTCCTGGGGAATGGCCC
GATGTTCCCGTTCCTGTTGCCAGACCCCGGGAAGGACTGGAACGCAACGC
CAGCCGACGCAGCCGTACCAGGCGGCTCAGCCAGCGTCTCAGTGTCTCCA
GCGATATCTTCCACGATGCGATTGAGGCCCAGGGCTATGGCGCAGCAGGC
GCAGGATCCAAGCGTCTGAGTGGGATATACCGTCACTCCATCATTGAGGA
CTCAGTTGAAGCCCTGGGTCTTACAGAACCGACCGAGCAACTGAAGGTCG
AAGAGCAGGAGGAACCACCCACCAAGACCAAATACGGACCCCGAATCTGG
GCCATCATGGTGGCACTGTGTGTGACGAATCTGCTGGTTGCGTTGGAAGG
AACAGTCATCTCGACGGCGCTGCCGACCATTGTGGAGGACCTGGGCGGCG
GCGAAGCGTATGTCTGGGCTTCGACTGGATATTTCCTCACCAATACCGTC
TTTCAACCGCTGTATGGGCAGATGGCCGACATCTTTGGCCGGCGATGGCT
GATCATCTTCGCGGTAGCCATGTTTGTGCTGGGCAGCGGCATCAGCGGCG
GCGCACCGAGCATGAACGCCCTCATTGCCGGTCGCGTCATCCAGGGCATC
GGAGGTGGTGGTATTACACTGTTGGTGAACCTGATTGTGTGTGATCTGGT
GCCCTTGCGCGAACGTGGTCGTCTTATGGCCATTGTTTTCGCGGCCGTCT
CCGTTGGCACCTCGCTGGGCCCCATCGTCGGAGGACTGATCGTGCAACAA
ACCACCTGGCGCTGGGTCTTCTATCTCAACCTGCCAGTCGGAGGTATTTC
CATGGTATTGTTGTTTGTCTTCCTGCAAGTTGGTCATCGCAGCGAAGAAA
CCTCTATCAAGCGCCGCCTGAAGCAAATCGACTATGGCGGCAACCTCATC
TTCATCCTGGCCATCTCATTCATTCTGGTCGCTCTGGCGTATGGTGGCAC
ACTGTGGCCGTGGAAGTCATACTCGACTATTATCTCGCTGGTCTTTGGTC
TCTATGGAGTCGTTGTGTTTATCTTCTACGAACAGAGCAACTTCTGTCGA
CAGCCCACGCTGCCCATGCGTCTCTTCACGCGCCGCACCTCAGCCACCGC
CTTCACCATCACCTTCATCCAGTCCATGCTCACCCTGCTCGTCATCTACT
TTCTTCCGGTCTACTTCCAGGCCGTGCTTCTGGCCTCACCCATTCGGTCA
GGTGTGATGATGCTCCCAACAGTACTGGTGTTGGTACCAGCCTCGGTAGT
CAGCGGCGCCCTGCTATCCAAATTTGGTCGCTACAAGCCCTTCCACTTTA
TCGGGTTCGCGCTCTTCACCCTGGGCTTTGGCTGTTTTATCACGCTGGAT
GAAAACTCACCAGATGTTGCCTGGATCATGGTGCAGATCGTCGTGGCCCT
GGGATCGGGCTCATCTCTGAGCACACTTCTACCCGCTGTGCAAGCCGAGT
TTTCGGATCAGGACACCGCGGCTGCTACAGCGGCATGGGCCTTTGTGCGC
CAGTTTGGTGTGGTCTGGGGTGTATCGGTGCCGTCGGCAATTTTTAATGC
GCAGGTGCAACACGATCTGTCGCGGGTCAGCAGTGACAGTGTCCAGAAGA
CGCTCAGTGGTGGAGCAGCCTACGAGCATGGTACTAAAGACTACGTCAAC
TCGCTTAGTGGGGATGTGCGAAAGCAGGTCATTGGATTGTACGCAGACAG
CTTACAGATAGTGTGGATTTTCGCGACTGTAATCGCAGGAGTTGGATTTT
TGTTGGTGTTCTTGGAACGTGAAATTACGCTGCGGACGAAGCTGGACACC
AAGTATGGATTGAAGGAGGAGAAAACGGCGGACTCATCTAATGCATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.1 |
| Note | SMCOG1005: EmrB/QacA |
| Note | SMCOG1005:Drug resistance transporter |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF06609 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:286855..288971 + |
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