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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:382538..383864- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000256-T1 ID=KJC3_000256-T1|Name=KJC3_000256-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1327bp|location=Sequence derived from alignment at ch1:382538..383864- (Aspergillus niger KJC3)
ATGGCAGGAGAGACAGCAAACCACATCATTGGTTATACATGGAATCCTAA
GAATCGCAATTTGTCGAGTGGTGGAAGTTCTGGTGGAGAAGGGGCCCTAA
TTGCCCTCCGTGGTTCACCGGCCGGGTTTGGCACTGATATTGGCGGTAGT
GTCCGGATTCCAGCATCTTTTAACGGACTTTTTGGGCTTCGCCCATCTGC
AGGAAGGATGCCGTATGAAGGTGCGGCGAACTCCATCGACGGACAAAATA
CCATTCTATCGGTTATTGGCCCGTTGGCGACAAGTATTGGGGGGTTGAAG
TTACTTTTCAAGGCTATACTCACCCAGGAACCATGGCAGCATGATCCTCT
CTCTTTGCCTTTGCCGTGGAGGGATGATGTTGAGAATAAGACGAAACGGT
TAATTTCGGAGAAAAGTACAGCTTCCCGACTGTCATTTGGTATCATGCGT
CATGATGGCCTTGTCGAGCCCCAACCGTCTGTAAAGGTAGCTATAGGTTT
TGTGGAACGCATTCTGAGGGACTTGGGTCATCAGGTAAGCACAAAACATC
GTCTTCCTTCCTGCATAGAATCTGACAAGCATTTAGGTCCTAGAGTGGGA
TACTGACTTATGCCGTGAAGGCAGAGAGATTGCCGTACGCCCATGTGTGG
GATATATAGTCTAAACTAGCGCGCTGATTCGTCACAGAGCAAAATCTACA
ATATGGATGGTGGCGAAGACCTTTTGAGCCACATAGCCCTGTCGGGAGAG
GCACAAATCCCGCAGTGTACTGTTGAACCAGGCAAACACTTCAACGCCAG
AGAGGTAGCGGCACTCAACGTGCAGAAAAGAGAATACCAAAAGAAATATA
TGGATTACTGGAACAGCACCGCCAATTTGACTACGACTGGAAAGCCAGTT
GATGCTGTCATCTGTCCAACCGCACCTCATGCAGCTGTTATTCCCGGGAA
GTACCGTCATACTGGGTACACTACATTCATCAACACTCTGGATTATACGA
GTTTGGTATTTCCTATTGCGTGCGCTGACAAGAATCTTCGGTCCATGACT
GAACGGTCCGAATTCCTGAGTGAACTCGATCAGGAGATCTTCGAAGATTG
TAAATTAGCCTTGTCCTACCCGTCTTGAACTATCTCTGACATCTTTAGAC
AATGCGGAAATATACCACGGAGCGCCTATTGGACTCCAACTGATCGGCAG
ACGGTTGGAAGAAGAGAAGATCATTACTATTGCCGAGTACCTTTGTGAAC
AGTCCAAGCTTTATACGGGACAAGGCTATGTGGCAAATCTGGTCGACGGA
TCCGTAATCAATCATTCAACTGCTTAA back to topCoding sequence (CDS) from alignment at ch1:382538..383864- >KJC3_000256-T1 ID=KJC3_000256-T1|Name=KJC3_000256-T1|organism=Aspergillus niger KJC3|type=CDS|length=4692bp|location=Sequence derived from alignment at ch1:382538..383864- (Aspergillus niger KJC3)
ACAATGCGGAAATATACCACGGAGCGCCTATTGGACTCCAACTGATCGGC
AGACGGTTGGAAGAAGAGAAGATCATTACTATTGCCGAGTACCTTTGTGA
ACAGTCCAAGCTTTATACGGGACAAGGCTATGTGGCAAATCTGGTCGACG
GATCCGTAATCAATCATTCAACTGCTTAAAGCAAAATCTACAATATGGAT
GGTGGCGAAGACCTTTTGAGCCACATAGCCCTGTCGGGAGAGGCACAAAT
CCCGCAGTGTACTGTTGAACCAGGCAAACACTTCAACGCCAGAGAGGTAG
CGGCACTCAACGTGCAGAAAAGAGAATACCAAAAGAAATATATGGATTAC
TGGAACAGCACCGCCAATTTGACTACGACTGGAAAGCCAGTTGATGCTGT
CATCTGTCCAACCGCACCTCATGCAGCTGTTATTCCCGGGAAGTACCGTC
ATACTGGGTACACTACATTCATCAACACTCTGGATTATACGAGTTTGGTA
TTTCCTATTGCGTGCGCTGACAAGAATCTTCGGTCCATGACTGAACGGTC
CGAATTCCTGAGTGAACTCGATCAGGAGATCTTCGAAGATTGTCCTAGAG
TGGGATACTGACTTATGCCGTGAAGGCAGAGAGATTGCCATGGCAGGAGA
GACAGCAAACCACATCATTGGTTATACATGGAATCCTAAGAATCGCAATT
TGTCGAGTGGTGGAAGTTCTGGTGGAGAAGGGGCCCTAATTGCCCTCCGT
GGTTCACCGGCCGGGTTTGGCACTGATATTGGCGGTAGTGTCCGGATTCC
AGCATCTTTTAACGGACTTTTTGGGCTTCGCCCATCTGCAGGAAGGATGC
CGTATGAAGGTGCGGCGAACTCCATCGACGGACAAAATACCATTCTATCG
GTTATTGGCCCGTTGGCGACAAGTATTGGGGGGTTGAAGTTACTTTTCAA
GGCTATACTCACCCAGGAACCATGGCAGCATGATCCTCTCTCTTTGCCTT
TGCCGTGGAGGGATGATGTTGAGAATAAGACGAAACGGTTAATTTCGGAG
AAAAGTACAGCTTCCCGACTGTCATTTGGTATCATGCGTCATGATGGCCT
TGTCGAGCCCCAACCGTCTGTAAAGGTAGCTATAGGTTTTGTGGAACGCA
TTCTGAGGGACTTGGGTCATCAGACAATGCGGAAATATACCACGGAGCGC
CTATTGGACTCCAACTGATCGGCAGACGGTTGGAAGAAGAGAAGATCATT
ACTATTGCCGAGTACCTTTGTGAACAGTCCAAGCTTTATACGGGACAAGG
CTATGTGGCAAATCTGGTCGACGGATCCGTAATCAATCATTCAACTGCTT
AAAGCAAAATCTACAATATGGATGGTGGCGAAGACCTTTTGAGCCACATA
GCCCTGTCGGGAGAGGCACAAATCCCGCAGTGTACTGTTGAACCAGGCAA
ACACTTCAACGCCAGAGAGGTAGCGGCACTCAACGTGCAGAAAAGAGAAT
ACCAAAAGAAATATATGGATTACTGGAACAGCACCGCCAATTTGACTACG
ACTGGAAAGCCAGTTGATGCTGTCATCTGTCCAACCGCACCTCATGCAGC
TGTTATTCCCGGGAAGTACCGTCATACTGGGTACACTACATTCATCAACA
CTCTGGATTATACGAGTTTGGTATTTCCTATTGCGTGCGCTGACAAGAAT
CTTCGGTCCATGACTGAACGGTCCGAATTCCTGAGTGAACTCGATCAGGA
GATCTTCGAAGATTGTCCTAGAGTGGGATACTGACTTATGCCGTGAAGGC
AGAGAGATTGCCATGGCAGGAGAGACAGCAAACCACATCATTGGTTATAC
ATGGAATCCTAAGAATCGCAATTTGTCGAGTGGTGGAAGTTCTGGTGGAG
AAGGGGCCCTAATTGCCCTCCGTGGTTCACCGGCCGGGTTTGGCACTGAT
ATTGGCGGTAGTGTCCGGATTCCAGCATCTTTTAACGGACTTTTTGGGCT
TCGCCCATCTGCAGGAAGGATGCCGTATGAAGGTGCGGCGAACTCCATCG
ACGGACAAAATACCATTCTATCGGTTATTGGCCCGTTGGCGACAAGTATT
GGGGGGTTGAAGTTACTTTTCAAGGCTATACTCACCCAGGAACCATGGCA
GCATGATCCTCTCTCTTTGCCTTTGCCGTGGAGGGATGATGTTGAGAATA
AGACGAAACGGTTAATTTCGGAGAAAAGTACAGCTTCCCGACTGTCATTT
GGTATCATGCGTCATGATGGCCTTGTCGAGCCCCAACCGTCTGTAAAGGT
AGCTATAGGTTTTGTGGAACGCATTCTGAGGGACTTGGGTCATCAGACAA
TGCGGAAATATACCACGGAGCGCCTATTGGACTCCAACTGATCGGCAGAC
GGTTGGAAGAAGAGAAGATCATTACTATTGCCGAGTACCTTTGTGAACAG
TCCAAGCTTTATACGGGACAAGGCTATGTGGCAAATCTGGTCGACGGATC
CGTAATCAATCATTCAACTGCTTAAAGCAAAATCTACAATATGGATGGTG
GCGAAGACCTTTTGAGCCACATAGCCCTGTCGGGAGAGGCACAAATCCCG
CAGTGTACTGTTGAACCAGGCAAACACTTCAACGCCAGAGAGGTAGCGGC
ACTCAACGTGCAGAAAAGAGAATACCAAAAGAAATATATGGATTACTGGA
ACAGCACCGCCAATTTGACTACGACTGGAAAGCCAGTTGATGCTGTCATC
TGTCCAACCGCACCTCATGCAGCTGTTATTCCCGGGAAGTACCGTCATAC
TGGGTACACTACATTCATCAACACTCTGGATTATACGAGTTTGGTATTTC
CTATTGCGTGCGCTGACAAGAATCTTCGGTCCATGACTGAACGGTCCGAA
TTCCTGAGTGAACTCGATCAGGAGATCTTCGAAGATTGTCCTAGAGTGGG
ATACTGACTTATGCCGTGAAGGCAGAGAGATTGCCATGGCAGGAGAGACA
GCAAACCACATCATTGGTTATACATGGAATCCTAAGAATCGCAATTTGTC
GAGTGGTGGAAGTTCTGGTGGAGAAGGGGCCCTAATTGCCCTCCGTGGTT
CACCGGCCGGGTTTGGCACTGATATTGGCGGTAGTGTCCGGATTCCAGCA
TCTTTTAACGGACTTTTTGGGCTTCGCCCATCTGCAGGAAGGATGCCGTA
TGAAGGTGCGGCGAACTCCATCGACGGACAAAATACCATTCTATCGGTTA
TTGGCCCGTTGGCGACAAGTATTGGGGGGTTGAAGTTACTTTTCAAGGCT
ATACTCACCCAGGAACCATGGCAGCATGATCCTCTCTCTTTGCCTTTGCC
GTGGAGGGATGATGTTGAGAATAAGACGAAACGGTTAATTTCGGAGAAAA
GTACAGCTTCCCGACTGTCATTTGGTATCATGCGTCATGATGGCCTTGTC
GAGCCCCAACCGTCTGTAAAGGTAGCTATAGGTTTTGTGGAACGCATTCT
GAGGGACTTGGGTCATCAGACAATGCGGAAATATACCACGGAGCGCCTAT
TGGACTCCAACTGATCGGCAGACGGTTGGAAGAAGAGAAGATCATTACTA
TTGCCGAGTACCTTTGTGAACAGTCCAAGCTTTATACGGGACAAGGCTAT
GTGGCAAATCTGGTCGACGGATCCGTAATCAATCATTCAACTGCTTAAAG
CAAAATCTACAATATGGATGGTGGCGAAGACCTTTTGAGCCACATAGCCC
TGTCGGGAGAGGCACAAATCCCGCAGTGTACTGTTGAACCAGGCAAACAC
TTCAACGCCAGAGAGGTAGCGGCACTCAACGTGCAGAAAAGAGAATACCA
AAAGAAATATATGGATTACTGGAACAGCACCGCCAATTTGACTACGACTG
GAAAGCCAGTTGATGCTGTCATCTGTCCAACCGCACCTCATGCAGCTGTT
ATTCCCGGGAAGTACCGTCATACTGGGTACACTACATTCATCAACACTCT
GGATTATACGAGTTTGGTATTTCCTATTGCGTGCGCTGACAAGAATCTTC
GGTCCATGACTGAACGGTCCGAATTCCTGAGTGAACTCGATCAGGAGATC
TTCGAAGATTGTCCTAGAGTGGGATACTGACTTATGCCGTGAAGGCAGAG
AGATTGCCATGGCAGGAGAGACAGCAAACCACATCATTGGTTATACATGG
AATCCTAAGAATCGCAATTTGTCGAGTGGTGGAAGTTCTGGTGGAGAAGG
GGCCCTAATTGCCCTCCGTGGTTCACCGGCCGGGTTTGGCACTGATATTG
GCGGTAGTGTCCGGATTCCAGCATCTTTTAACGGACTTTTTGGGCTTCGC
CCATCTGCAGGAAGGATGCCGTATGAAGGTGCGGCGAACTCCATCGACGG
ACAAAATACCATTCTATCGGTTATTGGCCCGTTGGCGACAAGTATTGGGG
GGTTGAAGTTACTTTTCAAGGCTATACTCACCCAGGAACCATGGCAGCAT
GATCCTCTCTCTTTGCCTTTGCCGTGGAGGGATGATGTTGAGAATAAGAC
GAAACGGTTAATTTCGGAGAAAAGTACAGCTTCCCGACTGTCATTTGGTA
TCATGCGTCATGATGGCCTTGTCGAGCCCCAACCGTCTGTAAAGGTAGCT
ATAGGTTTTGTGGAACGCATTCTGAGGGACTTGGGTCATCAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR020556 |
| DBxref | InterPro:IPR023631 |
| DBxref | InterPro:IPR036928 |
| DBxref | PFAM:PF01425 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:382538..383864 - |
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