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KJC3_000302-T1, KJC3_000302-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000302-T1
Unique NameKJC3_000302-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:491226..492573+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000302-T1 ID=KJC3_000302-T1|Name=KJC3_000302-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1348bp|location=Sequence derived from alignment at ch1:491226..492573+ (Aspergillus niger KJC3)
AGCTTGAGATTTTCAGCCTGATCAGCTTACGCCCCCTTTCTTCTCTCCTT
CTCACACGGCACACAACCAAATGCACCCACTGTTGATGCTCCCGGCATTT
CTTTCTACCCCCAATCCACCATGTCAACAGCAGCCACAACAACATCCGCG
GCAACCACAGCCTCAGCCCCCGTTCCATTAACCACGACTTTCATTCCTCC
CAGCACGTGCATTAGCGATTTCTGGCTCGTTAGCAGTAGCAGCAAAACAT
GGATGAACCTGGGGCCAGCACACACAGCTGAATGTGTTCCTTCGGGATGG
GATATATCCAGCTACTTCTCGCCGGGACTATGTCCCACTGGATATCGCAT
TGCGGCCAGTAACATCGTAATAGATGGGACTATTACTGAGACTGCGGCGA
CCTGCTGTCCGACGTGAGCACTTCATTTTACCATTGCGCTCTTCTTCAAA
GTCTGCAATACTAACACACCTGGCCATTATCTCTAGCATCGGCATCCAAG
CCTACTCCACCAGAACCACCTACACCCCCGGCTGGACCGAACTCGAAGTC
TGCACGTGGGAGCCCGGCACTACAACTGAGATCGAATTCGCTTATACTTG
GACCGACAGCGCCGGATCTACGAGCAGCACCTCCAGTTCCTTATCCAGCC
CGGGACACATCAACGGATACGGGATTTCCATTCGCTGGCAGTCGACGGAT
TTCACGACCCCGGCAGCCACAACAGCATCAACAACCTCGTCCGGAGACTC
ACCCGCGACCGCTACCTCTTCGACAACATCACCCACTTCCACATCCTCAC
CGAGCAACTCATCGGGCCTCTCAACCGGAGCGAAAGCAGGTATTGGTGTC
GGTGTTGCAGCGGGTGCGGTGCTGGCTATATTCCTCTTACTTTTCTTCCT
GCGCCGCCGGAAGGCAAACGGTGCTTTTTCAAATATGCAGGCTGATCAAT
CCCCGGGGCAGGGATATAGGGTGCAGAGGCTGAATGAGTTGCCGGCCACG
AGGACCGGGGCATTCATGACCGAGCAGGTGGAATTGCCGGCTTCGGGAAG
GGATGGGAAGGCGGAATTGCCGTCGGAATTTCCTGTCGCTGAGTTGGATG
GTGGAGGGAGACATTAATCATTGATTTATTAGTACTACTTCAATTACCTG
CTCAGGCCTGGGACTCCTTGGAACAGGGTATGTATATATTGAGTCTTATA
ATGTATATAATATAATTATCAAGCGTTCGTGGGGGTTACAGACGACGAAT
TCTATCGGCATGGGGTTCACACAGATCATACACATAAACTGGAGGTAATA
GAGCCTCAGGCATGTAGGATAGGATCGTCCTCAAGTAGTAAAATTCAC
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Coding sequence (CDS) from alignment at ch1:491226..492573+

>KJC3_000302-T1 ID=KJC3_000302-T1|Name=KJC3_000302-T1|organism=Aspergillus niger KJC3|type=CDS|length=1848bp|location=Sequence derived from alignment at ch1:491226..492573+ (Aspergillus niger KJC3)
ATGTCAACAGCAGCCACAACAACATCCGCGGCAACCACAGCCTCAGCCCC
CGTTCCATTAACCACGACTTTCATTCCTCCCAGCACGTGCATTAGCGATT
TCTGGCTCGTTAGCAGTAGCAGCAAAACATGGATGAACCTGGGGCCAGCA
CACACAGCTGAATGTGTTCCTTCGGGATGGGATATATCCAGCTACTTCTC
GCCGGGACTATGTCCCACTGGATATCGCATTGCGGCCAGTAACATCGTAA
TAGATGGGACTATTACTGAGACTGCGGCGACCTGCTGTCCGACCATCGGC
ATCCAAGCCTACTCCACCAGAACCACCTACACCCCCGGCTGGACCGAACT
CGAAGTCTGCACGTGGGAGCCCGGCACTACAACTGAGATCGAATTCGCTT
ATACTTGGACCGACAGCGCCGGATCTACGAGCAGCACCTCCAGTTCCTTA
TCCAGCCCGGGACACATCAACGGATACGGGATTTCCATTCGCTGGCAGTC
GACGGATTTCACGACCCCGGCAGCCACAACAGCATCAACAACCTCGTCCG
GAGACTCACCCGCGACCGCTACCTCTTCGACAACATCACCCACTTCCACA
TCCTCACCGAGCAACTCATCGGGCCTCTCAACCGGAGCGAAAGCAGGTAT
TGGTGTCGGTGTTGCAGCGGGTGCGGTGCTGGCTATATTCCTCTTACTTT
TCTTCCTGCGCCGCCGGAAGGCAAACGGTGCTTTTTCAAATATGCAGGCT
GATCAATCCCCGGGGCAGGGATATAGGGTGCAGAGGCTGAATGAGTTGCC
GGCCACGAGGACCGGGGCATTCATGACCGAGCAGGTGGAATTGCCGGCTT
CGGGAAGGGATGGGAAGGCGGAATTGCCGTCGGAATTTCCTGTCGCTGAG
TTGGATGGTGGAGGGAGACATTAAATGTCAACAGCAGCCACAACAACATC
CGCGGCAACCACAGCCTCAGCCCCCGTTCCATTAACCACGACTTTCATTC
CTCCCAGCACGTGCATTAGCGATTTCTGGCTCGTTAGCAGTAGCAGCAAA
ACATGGATGAACCTGGGGCCAGCACACACAGCTGAATGTGTTCCTTCGGG
ATGGGATATATCCAGCTACTTCTCGCCGGGACTATGTCCCACTGGATATC
GCATTGCGGCCAGTAACATCGTAATAGATGGGACTATTACTGAGACTGCG
GCGACCTGCTGTCCGACCATCGGCATCCAAGCCTACTCCACCAGAACCAC
CTACACCCCCGGCTGGACCGAACTCGAAGTCTGCACGTGGGAGCCCGGCA
CTACAACTGAGATCGAATTCGCTTATACTTGGACCGACAGCGCCGGATCT
ACGAGCAGCACCTCCAGTTCCTTATCCAGCCCGGGACACATCAACGGATA
CGGGATTTCCATTCGCTGGCAGTCGACGGATTTCACGACCCCGGCAGCCA
CAACAGCATCAACAACCTCGTCCGGAGACTCACCCGCGACCGCTACCTCT
TCGACAACATCACCCACTTCCACATCCTCACCGAGCAACTCATCGGGCCT
CTCAACCGGAGCGAAAGCAGGTATTGGTGTCGGTGTTGCAGCGGGTGCGG
TGCTGGCTATATTCCTCTTACTTTTCTTCCTGCGCCGCCGGAAGGCAAAC
GGTGCTTTTTCAAATATGCAGGCTGATCAATCCCCGGGGCAGGGATATAG
GGTGCAGAGGCTGAATGAGTTGCCGGCCACGAGGACCGGGGCATTCATGA
CCGAGCAGGTGGAATTGCCGGCTTCGGGAAGGGATGGGAAGGCGGAATTG
CCGTCGGAATTTCCTGTCGCTGAGTTGGATGGTGGAGGGAGACATTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000302KJC3_000302Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000302-T1.utr5p1KJC3_000302-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000302-T1.exon1KJC3_000302-T1.exon1Aspergillus niger KJC3exon
KJC3_000302-T1.exon2KJC3_000302-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000302-T1.cdsKJC3_000302-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000302-T1.utr3p1KJC3_000302-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000302-T1KJC3_000302-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:491226..492573 +
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