KJC3_000335-T1, KJC3_000335-T1 (mRNA) Aspergillus niger KJC3

Overview


Name	KJC3_000335-T1
Unique Name	KJC3_000335-T1
Type	mRNA
Organism	Aspergillus niger KJC3

Sequences

The following sequences are available for this feature:

mRNA from alignment at ch1:577103..578794-
coding sequence from alignment at ch1:577103..578794-

mRNA from alignment at ch1:577103..578794-

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>KJC3_000335-T1 ID=KJC3_000335-T1|Name=KJC3_000335-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1692bp|location=Sequence derived from alignment at ch1:577103..578794- (Aspergillus niger KJC3)
ATGTCAGACTCCCGAACCACAACCACCAAAAACAACACTACAAACCACAA
GACCTCGCGCCAGGGCCCTGGTTCGGCCTGTGAGGAATGCCGTCGCCGGA
AGCTACGGTGCGACCGCCAGCCGCAGTGTCAGAACTGCGTTGATGCTGGT
GTTTATTGTGTCACCAACCTTGCACGCCCCGCGCGTGGTCCAAAGAAGGG
TCATCTAAAGGCCTTGAAGGGCCGCATCGGTAGGGCCTTGAATTTCCTTC
CTGAGGATTGAGCTTGTTGCTGATTATGTGTCCTGGGAACAGCCACCCTC
GAGCGGTGTCTTCTGGAGCAGCGCGATGGCATGCTCGTTGATCCCATCTC
GGACGATGAGCTGCTGGATAAAGCGCTGTCCGCCTCTTCGCCAGCTTCCC
AGTCCCCGGACCCCTCTGAGGAAGTATCCGAAAACATTCTGGAAGACCTG
TATGCTTTATCTTCCCTTCCATTACGAGATTGAAGTCATCAGACTCACCG
GCTCAGGGACCAGGTGTTTTTCGAGCGCGTCCAGCCGATGGTCCCCATAT
TGCAACGCCATCGATACTTTTCCTGGGCACGGGAACCTCAGCAATCGGCA
AACCGACGGGGGCTGCAGCAGGCTATTCGCACGCTGGCCGCTGGCGTGAG
TAGCCAGTTGCCCGAGGTACGCGTAGCACTGTATCGGACCACGCGCCACA
CACTGGAGTCCCTCGAGTCGGACGACACTTTGTTGACAGCCCCGGATTTC
GAGCAGGTGCAAGCGTGGATCCTCATCGCCATTTACGAGTTTATGCAGGT
CTCATACTCTCGCGGCTGGATGAGCGCCGGTCGTGTATTCCGACTAGTGC
AGCTGCTGCGCCTGCCGGAGATAGACGCTTCGCCTCTTTCGCTGCTCGAC
CTGGACCTAGACCCAGATTCTAAATGGGTGGTGGCCGAGGAGAAACGACG
CACCGTGTGGATGGCCTACATAATGGACTGTTCCCTAAATTTACGCCATA
AGGGCTCTCTCACCCTGACCGAGCAAGCGCTGACCCGACTCCCCATGCCC
GAGAGTGAATTCCAATGTGGTCACCCTATTTCAATGGGCTTTTTGGCCGA
AGCACTCGCGGGTACGGATATTACCAGTCCCCTATCCTCCTTTGCTAAAT
GTATCCTGCTAGCCACTATCAGTGGCCGCACTCTGTCACACCGCCATCTA
TCCATGGCTGAGCTCCTCCGAGGAAATCCGCTTCAGGATGTCTGGACTCG
CCATCAGTGGATCGACACGACGCTCACAGCCCACCTGCAGCTAAGCTTTT
CGCTTCCCACGGCCGCGGAATCCAGCGACCCTATGCTCCTGTTTGCCAAG
ATGATCGGGCAAGCGGGTGTCCTCTCCCTGTATGACATCCTCCAGTCCAC
GCCCTGGGAGCCCGAAACAGTCAGCCTCCTACCCGACTACGAGGCATGCG
CGCTCCAGGCGGCCCGCGAGACTGTCGTTCTAGCACGTAATCTACGCCAT
TTCAGCTGCTTCAAGGTGCATCCCTTCACTCCTATTCTACTAGGCCTATG
TGCAGAGGTATTGCAGCACCCTGTTGCCCATAATGATACCCCAAAGCTGT
TAGGGGAGGTGCAGGACGCCTTGAAATATTTGATGACTGTGAATCGATTG
GCTCGACAGGAAGCAGCAGCTCAGGACATCCGCCGGTCATGA

Coding sequence (CDS) from alignment at ch1:577103..578794-

>KJC3_000335-T1 ID=KJC3_000335-T1|Name=KJC3_000335-T1|organism=Aspergillus niger KJC3|type=CDS|length=4716bp|location=Sequence derived from alignment at ch1:577103..578794- (Aspergillus niger KJC3)
GGACCAGGTGTTTTTCGAGCGCGTCCAGCCGATGGTCCCCATATTGCAAC
GCCATCGATACTTTTCCTGGGCACGGGAACCTCAGCAATCGGCAAACCGA
CGGGGGCTGCAGCAGGCTATTCGCACGCTGGCCGCTGGCGTGAGTAGCCA
GTTGCCCGAGGTACGCGTAGCACTGTATCGGACCACGCGCCACACACTGG
AGTCCCTCGAGTCGGACGACACTTTGTTGACAGCCCCGGATTTCGAGCAG
GTGCAAGCGTGGATCCTCATCGCCATTTACGAGTTTATGCAGGTCTCATA
CTCTCGCGGCTGGATGAGCGCCGGTCGTGTATTCCGACTAGTGCAGCTGC
TGCGCCTGCCGGAGATAGACGCTTCGCCTCTTTCGCTGCTCGACCTGGAC
CTAGACCCAGATTCTAAATGGGTGGTGGCCGAGGAGAAACGACGCACCGT
GTGGATGGCCTACATAATGGACTGTTCCCTAAATTTACGCCATAAGGGCT
CTCTCACCCTGACCGAGCAAGCGCTGACCCGACTCCCCATGCCCGAGAGT
GAATTCCAATGTGGTCACCCTATTTCAATGGGCTTTTTGGCCGAAGCACT
CGCGGGTACGGATATTACCAGTCCCCTATCCTCCTTTGCTAAATGTATCC
TGCTAGCCACTATCAGTGGCCGCACTCTGTCACACCGCCATCTATCCATG
GCTGAGCTCCTCCGAGGAAATCCGCTTCAGGATGTCTGGACTCGCCATCA
GTGGATCGACACGACGCTCACAGCCCACCTGCAGCTAAGCTTTTCGCTTC
CCACGGCCGCGGAATCCAGCGACCCTATGCTCCTGTTTGCCAAGATGATC
GGGCAAGCGGGTGTCCTCTCCCTGTATGACATCCTCCAGTCCACGCCCTG
GGAGCCCGAAACAGTCAGCCTCCTACCCGACTACGAGGCATGCGCGCTCC
AGGCGGCCCGCGAGACTGTCGTTCTAGCACGTAATCTACGCCATTTCAGC
TGCTTCAAGGTGCATCCCTTCACTCCTATTCTACTAGGCCTATGTGCAGA
GGTATTGCAGCACCCTGTTGCCCATAATGATACCCCAAAGCTGTTAGGGG
AGGTGCAGGACGCCTTGAAATATTTGATGACTGTGAATCGATTGGCTCGA
CAGGAAGCAGCAGCTCAGGACATCCGCCGGTCATGACCACCCTCGAGCGG
TGTCTTCTGGAGCAGCGCGATGGCATGCTCGTTGATCCCATCTCGGACGA
TGAGCTGCTGGATAAAGCGCTGTCCGCCTCTTCGCCAGCTTCCCAGTCCC
CGGACCCCTCTGAGGAAGTATCCGAAAACATTCTGGAAGACCTATGTCAG
ACTCCCGAACCACAACCACCAAAAACAACACTACAAACCACAAGACCTCG
CGCCAGGGCCCTGGTTCGGCCTGTGAGGAATGCCGTCGCCGGAAGCTACG
GTGCGACCGCCAGCCGCAGTGTCAGAACTGCGTTGATGCTGGTGTTTATT
GTGTCACCAACCTTGCACGCCCCGCGCGTGGTCCAAAGAAGGGTCATCTA
AAGGCCTTGAAGGGCCGCATCGGGACCAGGTGTTTTTCGAGCGCGTCCAG
CCGATGGTCCCCATATTGCAACGCCATCGATACTTTTCCTGGGCACGGGA
ACCTCAGCAATCGGCAAACCGACGGGGGCTGCAGCAGGCTATTCGCACGC
TGGCCGCTGGCGTGAGTAGCCAGTTGCCCGAGGTACGCGTAGCACTGTAT
CGGACCACGCGCCACACACTGGAGTCCCTCGAGTCGGACGACACTTTGTT
GACAGCCCCGGATTTCGAGCAGGTGCAAGCGTGGATCCTCATCGCCATTT
ACGAGTTTATGCAGGTCTCATACTCTCGCGGCTGGATGAGCGCCGGTCGT
GTATTCCGACTAGTGCAGCTGCTGCGCCTGCCGGAGATAGACGCTTCGCC
TCTTTCGCTGCTCGACCTGGACCTAGACCCAGATTCTAAATGGGTGGTGG
CCGAGGAGAAACGACGCACCGTGTGGATGGCCTACATAATGGACTGTTCC
CTAAATTTACGCCATAAGGGCTCTCTCACCCTGACCGAGCAAGCGCTGAC
CCGACTCCCCATGCCCGAGAGTGAATTCCAATGTGGTCACCCTATTTCAA
TGGGCTTTTTGGCCGAAGCACTCGCGGGTACGGATATTACCAGTCCCCTA
TCCTCCTTTGCTAAATGTATCCTGCTAGCCACTATCAGTGGCCGCACTCT
GTCACACCGCCATCTATCCATGGCTGAGCTCCTCCGAGGAAATCCGCTTC
AGGATGTCTGGACTCGCCATCAGTGGATCGACACGACGCTCACAGCCCAC
CTGCAGCTAAGCTTTTCGCTTCCCACGGCCGCGGAATCCAGCGACCCTAT
GCTCCTGTTTGCCAAGATGATCGGGCAAGCGGGTGTCCTCTCCCTGTATG
ACATCCTCCAGTCCACGCCCTGGGAGCCCGAAACAGTCAGCCTCCTACCC
GACTACGAGGCATGCGCGCTCCAGGCGGCCCGCGAGACTGTCGTTCTAGC
ACGTAATCTACGCCATTTCAGCTGCTTCAAGGTGCATCCCTTCACTCCTA
TTCTACTAGGCCTATGTGCAGAGGTATTGCAGCACCCTGTTGCCCATAAT
GATACCCCAAAGCTGTTAGGGGAGGTGCAGGACGCCTTGAAATATTTGAT
GACTGTGAATCGATTGGCTCGACAGGAAGCAGCAGCTCAGGACATCCGCC
GGTCATGACCACCCTCGAGCGGTGTCTTCTGGAGCAGCGCGATGGCATGC
TCGTTGATCCCATCTCGGACGATGAGCTGCTGGATAAAGCGCTGTCCGCC
TCTTCGCCAGCTTCCCAGTCCCCGGACCCCTCTGAGGAAGTATCCGAAAA
CATTCTGGAAGACCTATGTCAGACTCCCGAACCACAACCACCAAAAACAA
CACTACAAACCACAAGACCTCGCGCCAGGGCCCTGGTTCGGCCTGTGAGG
AATGCCGTCGCCGGAAGCTACGGTGCGACCGCCAGCCGCAGTGTCAGAAC
TGCGTTGATGCTGGTGTTTATTGTGTCACCAACCTTGCACGCCCCGCGCG
TGGTCCAAAGAAGGGTCATCTAAAGGCCTTGAAGGGCCGCATCGGGACCA
GGTGTTTTTCGAGCGCGTCCAGCCGATGGTCCCCATATTGCAACGCCATC
GATACTTTTCCTGGGCACGGGAACCTCAGCAATCGGCAAACCGACGGGGG
CTGCAGCAGGCTATTCGCACGCTGGCCGCTGGCGTGAGTAGCCAGTTGCC
CGAGGTACGCGTAGCACTGTATCGGACCACGCGCCACACACTGGAGTCCC
TCGAGTCGGACGACACTTTGTTGACAGCCCCGGATTTCGAGCAGGTGCAA
GCGTGGATCCTCATCGCCATTTACGAGTTTATGCAGGTCTCATACTCTCG
CGGCTGGATGAGCGCCGGTCGTGTATTCCGACTAGTGCAGCTGCTGCGCC
TGCCGGAGATAGACGCTTCGCCTCTTTCGCTGCTCGACCTGGACCTAGAC
CCAGATTCTAAATGGGTGGTGGCCGAGGAGAAACGACGCACCGTGTGGAT
GGCCTACATAATGGACTGTTCCCTAAATTTACGCCATAAGGGCTCTCTCA
CCCTGACCGAGCAAGCGCTGACCCGACTCCCCATGCCCGAGAGTGAATTC
CAATGTGGTCACCCTATTTCAATGGGCTTTTTGGCCGAAGCACTCGCGGG
TACGGATATTACCAGTCCCCTATCCTCCTTTGCTAAATGTATCCTGCTAG
CCACTATCAGTGGCCGCACTCTGTCACACCGCCATCTATCCATGGCTGAG
CTCCTCCGAGGAAATCCGCTTCAGGATGTCTGGACTCGCCATCAGTGGAT
CGACACGACGCTCACAGCCCACCTGCAGCTAAGCTTTTCGCTTCCCACGG
CCGCGGAATCCAGCGACCCTATGCTCCTGTTTGCCAAGATGATCGGGCAA
GCGGGTGTCCTCTCCCTGTATGACATCCTCCAGTCCACGCCCTGGGAGCC
CGAAACAGTCAGCCTCCTACCCGACTACGAGGCATGCGCGCTCCAGGCGG
CCCGCGAGACTGTCGTTCTAGCACGTAATCTACGCCATTTCAGCTGCTTC
AAGGTGCATCCCTTCACTCCTATTCTACTAGGCCTATGTGCAGAGGTATT
GCAGCACCCTGTTGCCCATAATGATACCCCAAAGCTGTTAGGGGAGGTGC
AGGACGCCTTGAAATATTTGATGACTGTGAATCGATTGGCTCGACAGGAA
GCAGCAGCTCAGGACATCCGCCGGTCATGACCACCCTCGAGCGGTGTCTT
CTGGAGCAGCGCGATGGCATGCTCGTTGATCCCATCTCGGACGATGAGCT
GCTGGATAAAGCGCTGTCCGCCTCTTCGCCAGCTTCCCAGTCCCCGGACC
CCTCTGAGGAAGTATCCGAAAACATTCTGGAAGACCTATGTCAGACTCCC
GAACCACAACCACCAAAAACAACACTACAAACCACAAGACCTCGCGCCAG
GGCCCTGGTTCGGCCTGTGAGGAATGCCGTCGCCGGAAGCTACGGTGCGA
CCGCCAGCCGCAGTGTCAGAACTGCGTTGATGCTGGTGTTTATTGTGTCA
CCAACCTTGCACGCCCCGCGCGTGGTCCAAAGAAGGGTCATCTAAAGGCC
TTGAAGGGCCGCATCG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus
GO:0042025	host cell nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270	zinc ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006351	transcription, DNA-templated
GO:0006355	regulation of transcription, DNA-templated

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
KJC3_000335	KJC3_000335	Aspergillus niger KJC3	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_000335-T1	KJC3_000335-T1-protein	Aspergillus niger KJC3	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_000335-T1.cds	KJC3_000335-T1.cds	Aspergillus niger KJC3	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_000335-T1.exon3	KJC3_000335-T1.exon3	Aspergillus niger KJC3	exon
KJC3_000335-T1.exon2	KJC3_000335-T1.exon2	Aspergillus niger KJC3	exon
KJC3_000335-T1.exon1	KJC3_000335-T1.exon1	Aspergillus niger KJC3	exon

Properties


Property Name	Value
Note	antiSMASH:Cluster_1.3
DBxref	InterPro:IPR036864
DBxref	InterPro:IPR007219
DBxref	InterPro:IPR001138
DBxref	PFAM:PF00172
DBxref	PFAM:PF04082
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC3	2021-10-31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ch1	supercontig	ch1:577103..578794 -

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KJC3_000335-T1, KJC3_000335-T1 (mRNA) Aspergillus niger KJC3