|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:677013..679969+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000371-T2 ID=KJC3_000371-T2|Name=KJC3_000371-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2957bp|location=Sequence derived from alignment at ch1:677013..679969+ (Aspergillus niger KJC3)
CTCTTCTCTTTTGCCTGCAAGATTGGCACTCCTAATGCAGAGTCCAGCGC
AGTATCCCTGTCATCATGGCCAGTCTGACCACCATTCAGGAGGCAGTGAG
AGTTATTTAGCGGCGGCTGAGTTCCTCCTCGCTGACAATGGGCTTCGGGG
GATTGTTGAGAGGGACTTGATAATCCCAGTGGTTTATCCTCCCATCCATT
GTCATTCTCCGATCTTTGTATCTTCTATGGGACGATCACTACCACCATGT
CGGCGACAATGTCCTCATCGCCCTCCGCCCGCTCTTCGACGCTAACTCCG
GCGGAGCTGGCCGAGTGGTCGCAGTCCCTCAAGCCGGTGGTGTTGGGTCC
CAGTATCACCATGGTGGTACTTGGCAATCTGGGTGTGATGCTGCGTATCT
GGGCCCAACGGCGCATTCACAAACGTCCCGTGCAGGAGGACTATTGGCTG
ATCATGGCCGTTGTATGTTATCTTTCTTTCGCCGCTCTGTCGACCCATCT
CAATCAACTCGGTCAATAACCCCTCATATCTGTCTCTAGCTCTTTTCCAA
CGTGGGCTCGATCGCCGTCCTAGTTGCGGTGCATTTTGGATTGGGGTACC
ATCAGTTCCGCGTCAACGCTGAGGATCCATCGCTGCGTTCCCTGCAGTGG
ATCTTCTTGTGCATGTGGCTCACGGCTACCTTCAACGGGCCCTCCATGCT
GGCCACCAAGATTGCCCTGCTCCTCTACTACCGCCGGCTGTTCATCGTGC
AGCAGATCTGGCTGCGTATCTTTTGGTGGACCAATGTTGTGTACGTGGTG
CTCTGGGGCATCGGCTCGACCATCACATATATGCTCTCGTGCGTGCCAGC
CAGCTACTACTGGGAGCGTTTCAACCCGGAGTCGACGATGCACGGCAGCT
GCCGCAACACCACCAACGCCGACGGCGTGCCGCTCATTCTGGACCTGATC
TCCGACGTCGCGATCCTGGCGCTGCCCATTGCTACCATCGCCACCCTGCA
GATGCCGCTAGCCCGCAAAGCTGGGCTCATCATCGTGTTCTCGGTCGGAT
TCCTGTACGTTCCCCTGAATGAGATTCCCTGTTATGTATAGCTAGCTTAA
CTCACTCCGCAGTGCCATTGTATCCGCGGTCGCCCGCGTCGTCGTGCTCT
ACAAGGCCACGAGCCTGCACACGGACTTCCCCTACGCAGCTGCCCCCTTC
GAGATGCTGGTCGTGATCCAGCTCAACATGGCTATCGTGTGCGCAACCGC
GGTGCCCATCGCCTCGGGCTTCCGGGTGGCCTTCAGCAAGAAGCGCCGCC
GCGACAAGAGCTGGATGGCAAAAGGCGTGAGCGGGAATACGTCCAGCAGC
CACGCCTCGGCGGCGGCGCGGGCCGCACGCCTGCGGCTCGAGGAAGAGGC
CAGCAGCAGCACCGAACAGCTGCATATGGGGCACTTCACCACCAGCTGTG
CCTCCAAGGGGCCGGAAGATCGGGCGCGGGGAGAAGAGCCCGTGACAGGG
AATGGGATTATGGTGAAGATGGATGTGGATATTCGATAGTATAGTACTTC
TACCATACAGTTACATAGACACGCAGTGGGAAACATATACCCTAATACTA
ACCCCCAAACCACCCTCAAAAGCCACTCACTCCACCCTCGTAGCACACCA
CCAAATAATCCTGGCATTATCATCCATAAAACTCGCCTTATTCCTCATTT
TCAGCGTCGTCTCCCCGACCTCCAACTCCGCCTGCACCTCCCACTTCATC
CCCAACTTCTCCCCAACCTCCTTCCAAAAGCCCTGCAAACTCCCCACATC
ATGCCTATAATGCAGCATCGTCTCTTCCGTGAACCCCTTCAAATCATACA
CCCCGGCTACCGTACTCCCCATCTGCCTCCCACAAACCACCGTTCCGATC
TGCCCCCTCGTCAACCCAATCAACCGTTTCACACCACGCACCTGCCCCTC
ATAATCCCAGAAATGCAGCAACGAGCCGGCCCAAACAACATCAATCTTCC
CCTTCATCGTCCCCACAATCTCGCCCGACTCCCACTCCTCGTCCGACACA
CCTAGATCCGCGCCCACAAATGTAGCGGGGAACGAGTCGGTATTGTCTCG
GAAGAGCTTGTACCCGAGCTCGAAGAACCCGGGTTCTAGATCGAAGCCGT
ATAATTGCGAGGGCGGGATCGAGGCCGCGTAGACTAAGTGTCGGAGCTCT
TGGCCGACGCAGCAGCCGGCGTCGAGGAAGCCATTGTCTGGGGAGGCGCG
CAGGCGGGACAGGACCTGTGGGTAGAAGGGGAGGCGGGAGAGGTGGCAGC
TTAGGAAGCGCATTTGGCCGATGCAGGGGTAGGGGAAGATGCGGAAGGCT
TCATCTCGCTGTTCACTCAAGTGGTTTCGGTTAGAGTTAGGGGGATGTCA
TCCTGGGTTGGAGATAGTCCTCGGGGGTATGGGTGCCTACCAGGGCTAAG
ACATGGGGAATGATCTCTTCGGGTGTGAGTCCGCTGTAATTCTCTAGCAT
TGACTGCGCAGCGGGGTCGATGGCCGTGACGCTGGTTTCGTACCAGGCTG
GCTTGGTGGTGGACATGGTAGGTGAGTCTTGTTGTTGGCTGGAATTAACG
TCGGGGTGGATGGATGGGCTAGGAAGTGAGTTCAGGATATGTGACCGTTA
AGCTTAATTGTAGGGTATGCTTCTCCATAAAAATCTGGAATGTCTAATCC
CGATTGCATCCCCACCGCCGCTTGACCTGCCCCAGAGAATCGGGGTGCTT
TAATAGGGGTATTATGCTACTCCACCTGTTTGTAATGGTAAATGATATGC
ACTGGCTCTCTACTCGGCCTGACTAATTTGTAGAGATTGAAACAATTGAA
AGAAGACACCATCTAGTGTAAAATCCTTCTCTTTCAATTTTCGGCATTGA
TCCAGGAACATAGATAAGCCCTATCACAACATAGATGGACATGCAAAATT
TTTTCCC back to topCoding sequence (CDS) from alignment at ch1:677013..679969+ >KJC3_000371-T2 ID=KJC3_000371-T2|Name=KJC3_000371-T2|organism=Aspergillus niger KJC3|type=CDS|length=3474bp|location=Sequence derived from alignment at ch1:677013..679969+ (Aspergillus niger KJC3)
ATGTCGGCGACAATGTCCTCATCGCCCTCCGCCCGCTCTTCGACGCTAAC
TCCGGCGGAGCTGGCCGAGTGGTCGCAGTCCCTCAAGCCGGTGGTGTTGG
GTCCCAGTATCACCATGGTGGTACTTGGCAATCTGGGTGTGATGCTGCGT
ATCTGGGCCCAACGGCGCATTCACAAACGTCCCGTGCAGGAGGACTATTG
GCTGATCATGGCCGTTCTCTTTTCCAACGTGGGCTCGATCGCCGTCCTAG
TTGCGGTGCATTTTGGATTGGGGTACCATCAGTTCCGCGTCAACGCTGAG
GATCCATCGCTGCGTTCCCTGCAGTGGATCTTCTTGTGCATGTGGCTCAC
GGCTACCTTCAACGGGCCCTCCATGCTGGCCACCAAGATTGCCCTGCTCC
TCTACTACCGCCGGCTGTTCATCGTGCAGCAGATCTGGCTGCGTATCTTT
TGGTGGACCAATGTTGTGTACGTGGTGCTCTGGGGCATCGGCTCGACCAT
CACATATATGCTCTCGTGCGTGCCAGCCAGCTACTACTGGGAGCGTTTCA
ACCCGGAGTCGACGATGCACGGCAGCTGCCGCAACACCACCAACGCCGAC
GGCGTGCCGCTCATTCTGGACCTGATCTCCGACGTCGCGATCCTGGCGCT
GCCCATTGCTACCATCGCCACCCTGCAGATGCCGCTAGCCCGCAAAGCTG
GGCTCATCATCGTGTTCTCGGTCGGATTCCTTGCCATTGTATCCGCGGTC
GCCCGCGTCGTCGTGCTCTACAAGGCCACGAGCCTGCACACGGACTTCCC
CTACGCAGCTGCCCCCTTCGAGATGCTGGTCGTGATCCAGCTCAACATGG
CTATCGTGTGCGCAACCGCGGTGCCCATCGCCTCGGGCTTCCGGGTGGCC
TTCAGCAAGAAGCGCCGCCGCGACAAGAGCTGGATGGCAAAAGGCGTGAG
CGGGAATACGTCCAGCAGCCACGCCTCGGCGGCGGCGCGGGCCGCACGCC
TGCGGCTCGAGGAAGAGGCCAGCAGCAGCACCGAACAGCTGCATATGGGG
CACTTCACCACCAGCTGTGCCTCCAAGGGGCCGGAAGATCGGGCGCGGGG
AGAAGAGCCCGTGACAGGGAATGGGATTATGGTGAAGATGGATGTGGATA
TTCGATAGATGTCGGCGACAATGTCCTCATCGCCCTCCGCCCGCTCTTCG
ACGCTAACTCCGGCGGAGCTGGCCGAGTGGTCGCAGTCCCTCAAGCCGGT
GGTGTTGGGTCCCAGTATCACCATGGTGGTACTTGGCAATCTGGGTGTGA
TGCTGCGTATCTGGGCCCAACGGCGCATTCACAAACGTCCCGTGCAGGAG
GACTATTGGCTGATCATGGCCGTTCTCTTTTCCAACGTGGGCTCGATCGC
CGTCCTAGTTGCGGTGCATTTTGGATTGGGGTACCATCAGTTCCGCGTCA
ACGCTGAGGATCCATCGCTGCGTTCCCTGCAGTGGATCTTCTTGTGCATG
TGGCTCACGGCTACCTTCAACGGGCCCTCCATGCTGGCCACCAAGATTGC
CCTGCTCCTCTACTACCGCCGGCTGTTCATCGTGCAGCAGATCTGGCTGC
GTATCTTTTGGTGGACCAATGTTGTGTACGTGGTGCTCTGGGGCATCGGC
TCGACCATCACATATATGCTCTCGTGCGTGCCAGCCAGCTACTACTGGGA
GCGTTTCAACCCGGAGTCGACGATGCACGGCAGCTGCCGCAACACCACCA
ACGCCGACGGCGTGCCGCTCATTCTGGACCTGATCTCCGACGTCGCGATC
CTGGCGCTGCCCATTGCTACCATCGCCACCCTGCAGATGCCGCTAGCCCG
CAAAGCTGGGCTCATCATCGTGTTCTCGGTCGGATTCCTTGCCATTGTAT
CCGCGGTCGCCCGCGTCGTCGTGCTCTACAAGGCCACGAGCCTGCACACG
GACTTCCCCTACGCAGCTGCCCCCTTCGAGATGCTGGTCGTGATCCAGCT
CAACATGGCTATCGTGTGCGCAACCGCGGTGCCCATCGCCTCGGGCTTCC
GGGTGGCCTTCAGCAAGAAGCGCCGCCGCGACAAGAGCTGGATGGCAAAA
GGCGTGAGCGGGAATACGTCCAGCAGCCACGCCTCGGCGGCGGCGCGGGC
CGCACGCCTGCGGCTCGAGGAAGAGGCCAGCAGCAGCACCGAACAGCTGC
ATATGGGGCACTTCACCACCAGCTGTGCCTCCAAGGGGCCGGAAGATCGG
GCGCGGGGAGAAGAGCCCGTGACAGGGAATGGGATTATGGTGAAGATGGA
TGTGGATATTCGATAGATGTCGGCGACAATGTCCTCATCGCCCTCCGCCC
GCTCTTCGACGCTAACTCCGGCGGAGCTGGCCGAGTGGTCGCAGTCCCTC
AAGCCGGTGGTGTTGGGTCCCAGTATCACCATGGTGGTACTTGGCAATCT
GGGTGTGATGCTGCGTATCTGGGCCCAACGGCGCATTCACAAACGTCCCG
TGCAGGAGGACTATTGGCTGATCATGGCCGTTCTCTTTTCCAACGTGGGC
TCGATCGCCGTCCTAGTTGCGGTGCATTTTGGATTGGGGTACCATCAGTT
CCGCGTCAACGCTGAGGATCCATCGCTGCGTTCCCTGCAGTGGATCTTCT
TGTGCATGTGGCTCACGGCTACCTTCAACGGGCCCTCCATGCTGGCCACC
AAGATTGCCCTGCTCCTCTACTACCGCCGGCTGTTCATCGTGCAGCAGAT
CTGGCTGCGTATCTTTTGGTGGACCAATGTTGTGTACGTGGTGCTCTGGG
GCATCGGCTCGACCATCACATATATGCTCTCGTGCGTGCCAGCCAGCTAC
TACTGGGAGCGTTTCAACCCGGAGTCGACGATGCACGGCAGCTGCCGCAA
CACCACCAACGCCGACGGCGTGCCGCTCATTCTGGACCTGATCTCCGACG
TCGCGATCCTGGCGCTGCCCATTGCTACCATCGCCACCCTGCAGATGCCG
CTAGCCCGCAAAGCTGGGCTCATCATCGTGTTCTCGGTCGGATTCCTTGC
CATTGTATCCGCGGTCGCCCGCGTCGTCGTGCTCTACAAGGCCACGAGCC
TGCACACGGACTTCCCCTACGCAGCTGCCCCCTTCGAGATGCTGGTCGTG
ATCCAGCTCAACATGGCTATCGTGTGCGCAACCGCGGTGCCCATCGCCTC
GGGCTTCCGGGTGGCCTTCAGCAAGAAGCGCCGCCGCGACAAGAGCTGGA
TGGCAAAAGGCGTGAGCGGGAATACGTCCAGCAGCCACGCCTCGGCGGCG
GCGCGGGCCGCACGCCTGCGGCTCGAGGAAGAGGCCAGCAGCAGCACCGA
ACAGCTGCATATGGGGCACTTCACCACCAGCTGTGCCTCCAAGGGGCCGG
AAGATCGGGCGCGGGGAGAAGAGCCCGTGACAGGGAATGGGATTATGGTG
AAGATGGATGTGGATATTCGATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000371-T2.utr5p1 | KJC3_000371-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000371-T2.utr3p1 | KJC3_000371-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:677013..679969 + |
|
