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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:690556..693067+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000378-T1 ID=KJC3_000378-T1|Name=KJC3_000378-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2512bp|location=Sequence derived from alignment at ch1:690556..693067+ (Aspergillus niger KJC3)
ATCATCCATGATTCTATTCTCATCTGAACACCTCCTCCTCTACCCTCCTC
GGTACTTGAGTGAGCCCCCGCCCTTTCCGCATTCTGACTGAATCCTCAAT
CGCTTCTAATCCATCGCTGGTTGCTGGCTCAACCTCACCTGTTCCGCGCG
GTAGACGCATCTCCTGCCTTTTCTTTGACCGACCGGACGTCTCTTTGGCG
ACAATATGTCGTCGACTGACAATGGCCTTCTATCCCCACCGCCAGTCCAT
AATATCCCCCTCAATGATTTAGAATCCAGTCGCCCTCGCCGTTATCACAC
CCCAAATTGGCCCGATCTAACCGACCCCTCGGCTCTCGCTCCTCATGTCA
AGCAGCACATGGATAACGGCATCGACCGTCTGGACGACTTCTTCACTAAG
GTCGCCATCTTCATAACTCCGAGTTACTTGCAGCATCATGTTGGCGGCAA
GTCGCAGCCCCCGTCTAGACAACATGCGATCGCAGCGTTGGATGGTCTGC
GCGGCTGGGCCTGCCTGCTGGTCTTCAACTTCCACTTCCTCTTCACATAT
ACCTGGAAGGTTGCCGTGGGCTGGGGATTCAACAATGAGAATTTCAGCGT
GCTGCAGCTCCCTATCATACACATGCTGGTCTCTGGTCATATAATGGTGG
CTATCTTCTTCGTCATCTCCGGTTATGTGCTCTCCTACAAGCCATTGAAG
TTGATTCGCAGTCGCTCCTGGGAACAGACCTTCACTACCTTAGCCTCATC
TACCTTTCGCCGCGCACTCCGTCTCTACATCCCGTCTGTCGTCGGCATCT
TATTGGTCTTTATCGCGGTCCGGTTGGGTGTGTACAACTACTCACATAAA
GTCCTCGTAGAGGGCCACACCATCCTCGGCACGAACGAACAGCATCCTCC
AATCATGCGGTCCTTCTACAAACAATACTGGGATTGGTACCTGACAATCG
TTCATCTGATGGATCCTTTCAACTGGGCTCTTTACTACAACTACTATAAT
CCCCATCTGTGGACCATCCCCGTCGAGTTTCGCAGCTCTATCGTGCTCTT
CCTCACCCTCCTGGGCACCTCTCGCTTGACAACACCCGTACGTATCTCGC
TTGTCAGTGGCCTGGTTTGGTTCTGTATGCGCTGGGGTCGTTGGGACATT
GTCCTCTTTTTGTTCGGCATGCTGATGGCGGAGGCGGATCTTATCAACGG
CACCTGGGAGCGACCTGCGAATGAGAGCGAGTCGAAGCCCAGACCTGGGC
ACCGACACTTCCTCCCGAAGCAGCAAAATGCCCTTAGACAAATGCTACCT
TTCCGTCTCTCTGCCCGCAATCTTTGGATCGGCCTCTTCGTCCTCGGTCT
GTATCTGGGATCCGCCCCGAACACCGGCTACAAGTGGACTCCCTTCTACC
GTTGGACTTGGGAGATTACCCCTCGAACCTACCCGGAGCCGCATCGATTC
CCCCAGACCCTGGGCGCTGTACTCATTGTGTTCAGCATCAACCACTCCAA
GGATCTCCAAAAGCTCTTCATCCACCCTGTCTCACAGTACCTAGGCAAGA
TCTCATTTGCCTTCTACATTGTCCACGGGCCCATTCTCCACTCGCTGGGC
TACTCTCTCATGCCTAACATCTGGGCCGTCGTTGGAAAAGAGACCAACTT
CCAGTACTGCCTGGGCTTTTTGATTGGTTGGCTCATCTGTCTTCCCATCT
CCCTCTGGGCTGGTGATGTCTTCTGGCGTGCGGTGGATATTCCCAGCGTG
AAGTTCGCCCGTTGGCTGGAAGACAAGCTCATCGTGAAACCAGCTAAGCC
CGAAAGCTCCAGCTCGAACTCACACCTGCACTAGCTGAGTGCATTAACGC
TGGATGTTCGGTCATAGCGTTGGCCTGCGAAGTCCACCGCTTCATTGTAG
GCTCTAACCTCCATCATCTTCCTCTTGCCTAATTCACGAAGCGCGCTCGT
AATGGCTGGATTCCCCAAGCTAGCGAGCAGACGCCCGCCCTCAAGTGAGG
AACTCATCTCTGTATCCTCCTCACATGCAGTGAAACAATTGAGATTTAGC
GCGAACACGGATTAGTGACCTGCAATGGAGCGACCTTGACACAGCGGATA
ACGGGAAACGAGATGCAAGTGTGGGGTCAGCTGGGGTCGCAAGTGAGTCT
TTAGGGGTGGATCAATTATTGATGTGAAACGGCAGACGGCTGTAAAGAAA
CCGATGCTGCCACTTGTATATCTTGAAGCGTTGTATATAGAACCGCCGTC
GACCTGGCTGAGAAGTCAGTAGACGGTCATGTAGCTCGGCGCCGGCCGCC
AGCCCCAACAGCTCCGGCATGGCCCGCAAGGCGCCGAAACGGAGTAAGGA
ATGAAACCATGATCAGTTAGATACAGGACTTGTGTTCAAATGATGATGTT
ACTCTACATTGATAGTGTTGCTCCTGTCGAACCCTGTTCTCCGCGCCCCC
GCGGAGGTCTTTTGGAATGGCCAGCAGTTGTCTCAGTTAGCCTGGGGCTG
GCTAGCTACAGG back to topCoding sequence (CDS) from alignment at ch1:690556..693067+ >KJC3_000378-T1 ID=KJC3_000378-T1|Name=KJC3_000378-T1|organism=Aspergillus niger KJC3|type=CDS|length=1629bp|location=Sequence derived from alignment at ch1:690556..693067+ (Aspergillus niger KJC3)
ATGTCGTCGACTGACAATGGCCTTCTATCCCCACCGCCAGTCCATAATAT
CCCCCTCAATGATTTAGAATCCAGTCGCCCTCGCCGTTATCACACCCCAA
ATTGGCCCGATCTAACCGACCCCTCGGCTCTCGCTCCTCATGTCAAGCAG
CACATGGATAACGGCATCGACCGTCTGGACGACTTCTTCACTAAGGTCGC
CATCTTCATAACTCCGAGTTACTTGCAGCATCATGTTGGCGGCAAGTCGC
AGCCCCCGTCTAGACAACATGCGATCGCAGCGTTGGATGGTCTGCGCGGC
TGGGCCTGCCTGCTGGTCTTCAACTTCCACTTCCTCTTCACATATACCTG
GAAGGTTGCCGTGGGCTGGGGATTCAACAATGAGAATTTCAGCGTGCTGC
AGCTCCCTATCATACACATGCTGGTCTCTGGTCATATAATGGTGGCTATC
TTCTTCGTCATCTCCGGTTATGTGCTCTCCTACAAGCCATTGAAGTTGAT
TCGCAGTCGCTCCTGGGAACAGACCTTCACTACCTTAGCCTCATCTACCT
TTCGCCGCGCACTCCGTCTCTACATCCCGTCTGTCGTCGGCATCTTATTG
GTCTTTATCGCGGTCCGGTTGGGTGTGTACAACTACTCACATAAAGTCCT
CGTAGAGGGCCACACCATCCTCGGCACGAACGAACAGCATCCTCCAATCA
TGCGGTCCTTCTACAAACAATACTGGGATTGGTACCTGACAATCGTTCAT
CTGATGGATCCTTTCAACTGGGCTCTTTACTACAACTACTATAATCCCCA
TCTGTGGACCATCCCCGTCGAGTTTCGCAGCTCTATCGTGCTCTTCCTCA
CCCTCCTGGGCACCTCTCGCTTGACAACACCCGTACGTATCTCGCTTGTC
AGTGGCCTGGTTTGGTTCTGTATGCGCTGGGGTCGTTGGGACATTGTCCT
CTTTTTGTTCGGCATGCTGATGGCGGAGGCGGATCTTATCAACGGCACCT
GGGAGCGACCTGCGAATGAGAGCGAGTCGAAGCCCAGACCTGGGCACCGA
CACTTCCTCCCGAAGCAGCAAAATGCCCTTAGACAAATGCTACCTTTCCG
TCTCTCTGCCCGCAATCTTTGGATCGGCCTCTTCGTCCTCGGTCTGTATC
TGGGATCCGCCCCGAACACCGGCTACAAGTGGACTCCCTTCTACCGTTGG
ACTTGGGAGATTACCCCTCGAACCTACCCGGAGCCGCATCGATTCCCCCA
GACCCTGGGCGCTGTACTCATTGTGTTCAGCATCAACCACTCCAAGGATC
TCCAAAAGCTCTTCATCCACCCTGTCTCACAGTACCTAGGCAAGATCTCA
TTTGCCTTCTACATTGTCCACGGGCCCATTCTCCACTCGCTGGGCTACTC
TCTCATGCCTAACATCTGGGCCGTCGTTGGAAAAGAGACCAACTTCCAGT
ACTGCCTGGGCTTTTTGATTGGTTGGCTCATCTGTCTTCCCATCTCCCTC
TGGGCTGGTGATGTCTTCTGGCGTGCGGTGGATATTCCCAGCGTGAAGTT
CGCCCGTTGGCTGGAAGACAAGCTCATCGTGAAACCAGCTAAGCCCGAAA
GCTCCAGCTCGAACTCACACCTGCACTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000378-T1.utr5p1 | KJC3_000378-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000378-T1.utr3p1 | KJC3_000378-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002656 |
| DBxref | PFAM:PF01757 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:690556..693067 + |
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