|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:700054..701481- Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000383-T1 ID=KJC3_000383-T1|Name=KJC3_000383-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1428bp|location=Sequence derived from alignment at ch1:700054..701481- (Aspergillus niger KJC3)
GTGATACGTCCAATCCTATCATTATCATTTTACTTGAATCAACTGACCTC
CATAATGACTGAATCAACCATATTGAAGCGACTCTCCGCCCTAGACACCA
ACACAGTGTCCGATGCACTAGATTTCTTAGACCTCAAAGGCGCCACATAT
GGTTTACGACCGCTCTGGGACTGCCCGAAAATAGTAGGACGAGCCAGCAC
AGTCAAAGTCGGTCCCAAGACCGACGCTGCTCCCACAACCCATCTCCTCA
CACCGGTCATCGACGCCGTCACAACAAATGACCGCATTCTAGTCATTTCA
GGCGGCACTGAGGGCATTTCATGCTGGGGCGATATCATCGCCAATGCTTC
GAAGAAGAAAGGCATCCGCGGGACCATCATCGATGGCATGAGCCGTGATA
TCGACGGCAGCAAGGACGTCAACTATCCTGTCTATGGCCGGGGAGTGACG
ATGATCAGCGCGCGAAACCGCTTAGTGCAGCTCGAGTCCGGTACACCATT
GCAGGTCCGCGGTGTCACCGTCAACCAAGATGACTACGTGATTGCCGATA
TCTGTGGAACAGTGTTTGTGCCGGCTGCGCGCATTGAGGAAGTTCTGGAC
TTGGGTGAACGCATTGATCGTCGCCAAAACCGCATGGTGCAGGCTGTGAG
AGCTGGAAACCCTGTCTCTGAGGTTATGCATGATAAGCAGTTTGAGGCTA
TCCGCTCCAGTGATGAGTCTGCCCCGGCTAGTTCATCGTCCTCGTCGTCA
TCCAACCCTAAGAAAGCGAGCCCTGAAGACGCGGAGCTGGCTGCCCTGTT
TGCTGAATCAGATACCCCTGGCATCTCGGATGCGCTTGATAAGCTTGGTA
TTCCTGGACAGGCGCTTGGTATCATGCCTTTGACCAACTACGAAAAGGTA
ACGGTAGGGCCGGCCTTTACTGTGCGCTATGTTCCTGCTAGCGATCCCCC
AGGCAGTGTTGGCGACTTCATTGACGATGTCGCCGAGGGTGACTTTGTGG
TCATTGACAACGGCGGCCGTACTGATTGCACTGTTTGGGGAGATATTATG
ACGCAATATGCTGGCCTGCGAGGCATTGCTGGCACTGTCATCGACGGTGT
CTGCCGTGATGTAAATCGCGCAATCAAGGACGAGTACCCTATTTTCACGG
CAGGGCGTTGGATGCGGACTGGCAAGGACCGGGTGCAAGTCGGAGGCGTC
AATGAGTCTGTGGGAATTGGCAAAGTCCGTGTCAACCCCCGTGATATCGT
GGTTGCTGATGCCAACGGTGTTGTCATTGTCCCTCGGCATCGGGCGAGGG
AAGTGGCGGAAGTTGCTCAGAAGATTGAAAAGAGCGAGGAAGGCATTCGC
GAAATGATCATGGGTGGAGCAAGCATTGGAGAGGCACGGAAGCAGCTTGG
ATATCACACACTGCAGCGTAAGAATTAA back to topCoding sequence (CDS) from alignment at ch1:700054..701481- >KJC3_000383-T1 ID=KJC3_000383-T1|Name=KJC3_000383-T1|organism=Aspergillus niger KJC3|type=CDS|length=1374bp|location=Sequence derived from alignment at ch1:700054..701481- (Aspergillus niger KJC3)
ATGACTGAATCAACCATATTGAAGCGACTCTCCGCCCTAGACACCAACAC
AGTGTCCGATGCACTAGATTTCTTAGACCTCAAAGGCGCCACATATGGTT
TACGACCGCTCTGGGACTGCCCGAAAATAGTAGGACGAGCCAGCACAGTC
AAAGTCGGTCCCAAGACCGACGCTGCTCCCACAACCCATCTCCTCACACC
GGTCATCGACGCCGTCACAACAAATGACCGCATTCTAGTCATTTCAGGCG
GCACTGAGGGCATTTCATGCTGGGGCGATATCATCGCCAATGCTTCGAAG
AAGAAAGGCATCCGCGGGACCATCATCGATGGCATGAGCCGTGATATCGA
CGGCAGCAAGGACGTCAACTATCCTGTCTATGGCCGGGGAGTGACGATGA
TCAGCGCGCGAAACCGCTTAGTGCAGCTCGAGTCCGGTACACCATTGCAG
GTCCGCGGTGTCACCGTCAACCAAGATGACTACGTGATTGCCGATATCTG
TGGAACAGTGTTTGTGCCGGCTGCGCGCATTGAGGAAGTTCTGGACTTGG
GTGAACGCATTGATCGTCGCCAAAACCGCATGGTGCAGGCTGTGAGAGCT
GGAAACCCTGTCTCTGAGGTTATGCATGATAAGCAGTTTGAGGCTATCCG
CTCCAGTGATGAGTCTGCCCCGGCTAGTTCATCGTCCTCGTCGTCATCCA
ACCCTAAGAAAGCGAGCCCTGAAGACGCGGAGCTGGCTGCCCTGTTTGCT
GAATCAGATACCCCTGGCATCTCGGATGCGCTTGATAAGCTTGGTATTCC
TGGACAGGCGCTTGGTATCATGCCTTTGACCAACTACGAAAAGGTAACGG
TAGGGCCGGCCTTTACTGTGCGCTATGTTCCTGCTAGCGATCCCCCAGGC
AGTGTTGGCGACTTCATTGACGATGTCGCCGAGGGTGACTTTGTGGTCAT
TGACAACGGCGGCCGTACTGATTGCACTGTTTGGGGAGATATTATGACGC
AATATGCTGGCCTGCGAGGCATTGCTGGCACTGTCATCGACGGTGTCTGC
CGTGATGTAAATCGCGCAATCAAGGACGAGTACCCTATTTTCACGGCAGG
GCGTTGGATGCGGACTGGCAAGGACCGGGTGCAAGTCGGAGGCGTCAATG
AGTCTGTGGGAATTGGCAAAGTCCGTGTCAACCCCCGTGATATCGTGGTT
GCTGATGCCAACGGTGTTGTCATTGTCCCTCGGCATCGGGCGAGGGAAGT
GGCGGAAGTTGCTCAGAAGATTGAAAAGAGCGAGGAAGGCATTCGCGAAA
TGATCATGGGTGGAGCAAGCATTGGAGAGGCACGGAAGCAGCTTGGATAT
CACACACTGCAGCGTAAGAATTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000383-T1.utr5p1 | KJC3_000383-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036704 |
| DBxref | InterPro:IPR005493 |
| DBxref | PFAM:PF03737 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:700054..701481 - |
|
