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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:761136..765905- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000406-T1 ID=KJC3_000406-T1|Name=KJC3_000406-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4770bp|location=Sequence derived from alignment at ch1:761136..765905- (Aspergillus niger KJC3)
CCATGCAGGTAGCAGCAACGCGTCTTCAACTAGCTGCTTCGCTTCTGTAT
CCCTCATGGCGCTCTTGTTATTTGAAGCAGCCCACTAACACCTGTACTCA
ATCGAGGCCGCGTTGATCCCACACCTACCTCTTACGGTATGTCATCTCAC
GTTATTTACCGTGTTAAGGACCATTCATTGTCGTACTGACCTGGTATCGC
ATCTTGCAGCTGTCTTGACCTCTTACTGTCTAGCGCCTTCTTTTACCGCA
GTGCCGCTCCCATTGAAGCCCGCGATTACGCGATCGTTTGCGACCCGTTG
CTCTGTACAGTATCTACAACTCGGTATTGCTAGAAGACAATGGATCCGGA
GGACTCTCTTGCAGACCCGTTTTCCAGCCAGGGTTTATGGAGAGTCTCCA
AGTTTACCTTACAGTCTCTACAGCCGTTGGAGCGCTTGGGGTGGGACGAA
AAATTACCTGATCTTTCGAGTGCTTTTTTCGAGTCTCCTTTGAACATCTT
CGACAAATTCGGCACGGAAATCCCTAGCATTAATCCTTTCGGTACCGACT
TATTGGATGGGGATCAGACGCTGGAGTTGGATAACGATACGTCAAGTGAG
AACCAAGTTATTGCGACTACCGATGAGCAGGACATTGAAGACGAGCCGGA
GGATATATGGGCACTTGGGAATCAAGATATCGAGCAGGAGCGCTGCGATT
TGCTGAAATCCTGGGAGAAATACCGCGAGCGGACATATCGCGAACCTGTT
TCGGCATACTTTAGCGAATCCGGTGCGAAAGGCTTTGATGCTGCATTGGC
ACGGCAAGCTGCAAAGGTGGGAACACAGACCCAGAGGTTTATGGTCAGGC
GAGATGTGTTCTTCCAGGCGTTGCTCAAGCTTGGGCTTGGGTGGGGCTCT
ATGTTTTTCAAATATGATGAACATAAGAAGCAGTTCGAACGAGTGCACAA
CAATATTCGGATTTCTGGGATAACATCAGTTGCACTAAATGGGCTAACTG
AGGAGCTGATTCAATGCGGCACAAACATGCAGAAAATACGGGTTTTTGCT
AATAAGGTGCCAAGTAGGCCAAAGGAACTCTCTGCTCGGTCGGCCTTTGC
GAGTGCCGCGGCTGTGGTTGTCTATACACTCGAGAAGCAGCTTGTCGGAC
AATTCGCCAGTGTTACCTCTCTCCTTCAGATCAAGGCGCTGTTTCATGAA
TGCGGGAAGGTGGTGACCATCCTAGCGAATGTGATCGAGGCAATTGATGG
TGCAGTGTCCGAGGCACAGATAATATCTGTTGTTTCTGAACGAGCCGCCC
ACTTCTCGCAAATATTCGACCATATAGAACCTCTCTTACGCGAGATTGTG
AGTCGAGTGGCCGAGCCCTGGCTGAGGCACGTAGAGACCTGGGTTGGCCT
TCGTCCAGAGACAGCGGCATCAGTAGACCTGGCTTCGAGTGGTAGGAGCT
TTGTCGTTGCGGAGAGCCAGGAGAAATCTAGAAAGGCAACAAAGGCGCCG
AGGGTTGACTACAAGTATCTGCCTGATAATATGCCCTCTTTCATCCCTGA
TGACCTGGCGTCTTTGGTTTTCGAGAGTGGACGAAGCCTGAGGCTCCTTA
AAACATATCACCCTCAACATCCAGTCGCCAACCATGAGATGTACCGTTCT
ACTACGCCCACTTTTGAATGTGCGGGTACGTGGTTCGATATAACAAGAAT
CGAAAAGAAGGCCATAGAGTACGAAGCTAGACTACGCTCTGAGATACTCA
AATACAACCGTGGTGATATGGATAGAGGGCCAGGCAGAATATCTGTTGCC
GACGCTTCTGAATCGACTGGGGAGTCAGATGTGCTCACAGACACTTTTGA
ACTCTTTGACCTCGATAACATGCCGAATCCCACAGGGCTGTTACCAATGG
ATGGAAGCTCTAGAGATCAGCTTGGCCATCTAATTGATGGAAACGTCCAC
TGCAATGCTGAACAGCCTGCAGCTCATAGCAACTTCGGTCCGGAACTGAC
CTCATCATATTACCTATCTTTGGCGCCTCTCCTCTGCTCTCAGGCACTAT
TGATCGATTTCTCTTGTCTCCATCTACTATTTAAAGAGCATCATCTTCGA
ACCCACCTCAACCTCCAATGGCGGTTCCAGCTCCTTGGTGATGGTTATTT
CACCTCTCGTCTCTCTGATTCCCTTTTTGATCCCGACATGGAAAGCGGAG
AGCGCAAAGCTGGTGTAGTGAGGAGTGACGTCCACGCTGGATTACGCCTG
GGAAGCCGAGATACATGGCCTCCAGCCAGTTCAGAATTACGGCTGGTACT
GATGGGTCTACTTAATGAATGCCATGATGCGGAAAAACGCTTGGACCCGT
CGATGGACTCTAAACTGTGGAATGAAAAGGAGCTACCTGGTGGCCTTAGC
TTCTCTATCCGTGACCTAACGGATGAGGAGGTTGTGAAATGCAAAGACCC
AAATGCCATTGAGGCGCTTGATTTCCTTCGTCTCCAGTACAAACCCTTGC
CTGTGCTGGAGACAATATTGACTTCGAATTCTCTTGAAAAATATGACCGT
CTCTTCAAGCATTTGCTCCGACTGCTACGCATGGTATCAGTTGTTAGGAG
TCTCATTCGAGATTCAACTGCGAGAGACTCCCTATCAGGTGATACGCGGA
ATGTGCTCCAGAAATTCCGGGTGGATGCGCAGCATTTTGTGCTAGCCGTA
AGCGACTACTGCTTCCATGTCGGGATTGGAGCTACATGGCGACGATTTCA
GGAGACCCTATCGAATATTGAATCTTGTCTTGACCGACATGATATAAATG
GTACGATTGAAGCGGCCAGCTCAGTCCCTAGACTGCGCGACTACCATGAA
GACGTCTTAGATCAGATGCTTTATGCCCTTTTTCTCAGCAAAAAGCATAC
TGAGGTCGCAAATCTCCTTGATGAAATCTTTGGAACAATTCTCACCTTTG
CTCCGCTCTCGCAGCTGGACGGGATTAATGGAGTACGCCACGAGGCGAAG
CCTGCTGTTCGTCGATTGTACAATCTCTTTAGGAAACAAAACTCTGCCTT
TGTCGGCTATTTACGCCGCATAGAAGGCATCAAATCTACGTCGAGGTCTT
TTGATCGGTGGGATACGACGTTTACTGCCAAGGAGGAGCCTGCAACAGTC
TTCGACCATCTGCTGGCCCGTTTAGACACGAAAAGGTACTACTAAATACC
ATCAATGGGAATTGGAATAAGAACTGTCCAATTCAACATTCCACCTCTTT
AGCATCAGCCTGATGGCAGGAGTCGGGCGCCGGCGAGATTGATAGACCAT
TTGGATATTGATGTAACGTGGCTTACATCATGGTAGCACCTATTGTCGAG
TCGGCCGGCAACCGCGGCTTGCCTGCTTATGCTTTGTTGGTAGTTGCGAC
CCGAGGGTCTGCACTTTGAGGATAATACGCTGAAACACCTCGCGCATGTT
CCCGTCATTCTTTGTATTCACATGTAGAAGTCTGACAACCTGTTGCAGAT
CATGTGGGGAACCTGGCGCCAAGTAACCTGACACCGGAGGACTTCCTTCT
CTTCCCTCCCCTCCTTTGTAACATATACTTCTTATCAATACCACTTTTGC
TCGTTCAGTATGATCTGTGTTTCACCGCCGATGCGGGAAGGCAGTAACAG
TCGCTACCATGACTGCGGTTCATACTTATTGACTTGGCCGGATGCATGCC
TTGGGAACTTGGTGTAACTCAACCGCACTCAGCACAATGAAAGCGCAGGT
GACAGACCCTTCCAGCAGAATCCAGAAGATTATGGTGTATTTTTGGTGTT
CCCAGCTCCAATAATCAAGATAAAAGGAATAGACAGAGATCTTATCACCG
GACTTCAAGGACTCCACATAACTGACAATCATGGTAAGGAAGTAGTCCAT
CAGCAGCTTAACAAAGCTTTCATAGACCCTTATGACAAGATTCAAGAAAC
AGAAAACTGGCTGTTTTTGCTCTTCCACGGGTTCCTCAGTTGACCCCACC
CTCTGATTTGTGTCTGATATCTCTTCTGATCCCAGCGGCCGACTCTCAGC
ATCTTTCTTTCGCGATATTTTGCTTTGGTGAGAAAGTGACAGTAATAAGT
GCACCGTGGTGAACGCCGCATGGAAGACAGACACAGTGACCATAACACCG
ATCATAGCAATGCCTCCTATTCCAACAAGGCGTGTGTTCGAGTAATAGAA
AAAAGCAAGAGATAGATATAGAACTGCAGTGCCAAGTGCCAGGCCAGTTA
TCAGGAACTGGAGATAAATACAAAAGAAAAGGGCAAAAGGTACTTTTGCA
TTATCTGGGAAACTGAAGAGCAATAGATGGATTATCAAAAGACCGAATGG
AGCACTCAGGAAAAGCATAGAGGAAGCGTGTAATAAAGTAGCCGCAAGGC
TATCAGGACAAGTTATATTGAAGTAGGCATTCAGGGTGAAGGCGCCTGCA
AATGTTGTGATCACAAGAAGAACATTTGCTAGACCCAGACAAGCCTTTAT
CACTGCTTTGTTGTTGGCGTTGCCTTTCTTCTTCTTCTTCTTCTTCTTCC
TTCGCTGGTGGAGATTTGGGAAAGGGGTAGAACGCGAAGTCTTCGTGTAT
AGCATGATGTTGGTTGGCAAAAGTCCCGTCAGTCCGAACGACTAGTAGAA
GCGCAATGTGTCGCTTGCTTTCCCACTCTGAATCGATGGAGTTGTATTGA
TGTCACATGGATCAAGAATTATGATGGCTGATGTCTTATATTAAAACTCT
TCTATACTAACTGATTAAAG back to topCoding sequence (CDS) from alignment at ch1:761136..765905- >KJC3_000406-T1 ID=KJC3_000406-T1|Name=KJC3_000406-T1|organism=Aspergillus niger KJC3|type=CDS|length=2856bp|location=Sequence derived from alignment at ch1:761136..765905- (Aspergillus niger KJC3)
ATGGATCCGGAGGACTCTCTTGCAGACCCGTTTTCCAGCCAGGGTTTATG
GAGAGTCTCCAAGTTTACCTTACAGTCTCTACAGCCGTTGGAGCGCTTGG
GGTGGGACGAAAAATTACCTGATCTTTCGAGTGCTTTTTTCGAGTCTCCT
TTGAACATCTTCGACAAATTCGGCACGGAAATCCCTAGCATTAATCCTTT
CGGTACCGACTTATTGGATGGGGATCAGACGCTGGAGTTGGATAACGATA
CGTCAAGTGAGAACCAAGTTATTGCGACTACCGATGAGCAGGACATTGAA
GACGAGCCGGAGGATATATGGGCACTTGGGAATCAAGATATCGAGCAGGA
GCGCTGCGATTTGCTGAAATCCTGGGAGAAATACCGCGAGCGGACATATC
GCGAACCTGTTTCGGCATACTTTAGCGAATCCGGTGCGAAAGGCTTTGAT
GCTGCATTGGCACGGCAAGCTGCAAAGGTGGGAACACAGACCCAGAGGTT
TATGGTCAGGCGAGATGTGTTCTTCCAGGCGTTGCTCAAGCTTGGGCTTG
GGTGGGGCTCTATGTTTTTCAAATATGATGAACATAAGAAGCAGTTCGAA
CGAGTGCACAACAATATTCGGATTTCTGGGATAACATCAGTTGCACTAAA
TGGGCTAACTGAGGAGCTGATTCAATGCGGCACAAACATGCAGAAAATAC
GGGTTTTTGCTAATAAGGTGCCAAGTAGGCCAAAGGAACTCTCTGCTCGG
TCGGCCTTTGCGAGTGCCGCGGCTGTGGTTGTCTATACACTCGAGAAGCA
GCTTGTCGGACAATTCGCCAGTGTTACCTCTCTCCTTCAGATCAAGGCGC
TGTTTCATGAATGCGGGAAGGTGGTGACCATCCTAGCGAATGTGATCGAG
GCAATTGATGGTGCAGTGTCCGAGGCACAGATAATATCTGTTGTTTCTGA
ACGAGCCGCCCACTTCTCGCAAATATTCGACCATATAGAACCTCTCTTAC
GCGAGATTGTGAGTCGAGTGGCCGAGCCCTGGCTGAGGCACGTAGAGACC
TGGGTTGGCCTTCGTCCAGAGACAGCGGCATCAGTAGACCTGGCTTCGAG
TGGTAGGAGCTTTGTCGTTGCGGAGAGCCAGGAGAAATCTAGAAAGGCAA
CAAAGGCGCCGAGGGTTGACTACAAGTATCTGCCTGATAATATGCCCTCT
TTCATCCCTGATGACCTGGCGTCTTTGGTTTTCGAGAGTGGACGAAGCCT
GAGGCTCCTTAAAACATATCACCCTCAACATCCAGTCGCCAACCATGAGA
TGTACCGTTCTACTACGCCCACTTTTGAATGTGCGGGTACGTGGTTCGAT
ATAACAAGAATCGAAAAGAAGGCCATAGAGTACGAAGCTAGACTACGCTC
TGAGATACTCAAATACAACCGTGGTGATATGGATAGAGGGCCAGGCAGAA
TATCTGTTGCCGACGCTTCTGAATCGACTGGGGAGTCAGATGTGCTCACA
GACACTTTTGAACTCTTTGACCTCGATAACATGCCGAATCCCACAGGGCT
GTTACCAATGGATGGAAGCTCTAGAGATCAGCTTGGCCATCTAATTGATG
GAAACGTCCACTGCAATGCTGAACAGCCTGCAGCTCATAGCAACTTCGGT
CCGGAACTGACCTCATCATATTACCTATCTTTGGCGCCTCTCCTCTGCTC
TCAGGCACTATTGATCGATTTCTCTTGTCTCCATCTACTATTTAAAGAGC
ATCATCTTCGAACCCACCTCAACCTCCAATGGCGGTTCCAGCTCCTTGGT
GATGGTTATTTCACCTCTCGTCTCTCTGATTCCCTTTTTGATCCCGACAT
GGAAAGCGGAGAGCGCAAAGCTGGTGTAGTGAGGAGTGACGTCCACGCTG
GATTACGCCTGGGAAGCCGAGATACATGGCCTCCAGCCAGTTCAGAATTA
CGGCTGGTACTGATGGGTCTACTTAATGAATGCCATGATGCGGAAAAACG
CTTGGACCCGTCGATGGACTCTAAACTGTGGAATGAAAAGGAGCTACCTG
GTGGCCTTAGCTTCTCTATCCGTGACCTAACGGATGAGGAGGTTGTGAAA
TGCAAAGACCCAAATGCCATTGAGGCGCTTGATTTCCTTCGTCTCCAGTA
CAAACCCTTGCCTGTGCTGGAGACAATATTGACTTCGAATTCTCTTGAAA
AATATGACCGTCTCTTCAAGCATTTGCTCCGACTGCTACGCATGGTATCA
GTTGTTAGGAGTCTCATTCGAGATTCAACTGCGAGAGACTCCCTATCAGG
TGATACGCGGAATGTGCTCCAGAAATTCCGGGTGGATGCGCAGCATTTTG
TGCTAGCCGTAAGCGACTACTGCTTCCATGTCGGGATTGGAGCTACATGG
CGACGATTTCAGGAGACCCTATCGAATATTGAATCTTGTCTTGACCGACA
TGATATAAATGGTACGATTGAAGCGGCCAGCTCAGTCCCTAGACTGCGCG
ACTACCATGAAGACGTCTTAGATCAGATGCTTTATGCCCTTTTTCTCAGC
AAAAAGCATACTGAGGTCGCAAATCTCCTTGATGAAATCTTTGGAACAAT
TCTCACCTTTGCTCCGCTCTCGCAGCTGGACGGGATTAATGGAGTACGCC
ACGAGGCGAAGCCTGCTGTTCGTCGATTGTACAATCTCTTTAGGAAACAA
AACTCTGCCTTTGTCGGCTATTTACGCCGCATAGAAGGCATCAAATCTAC
GTCGAGGTCTTTTGATCGGTGGGATACGACGTTTACTGCCAAGGAGGAGC
CTGCAACAGTCTTCGACCATCTGCTGGCCCGTTTAGACACGAAAAGGTAC
TACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0043015 | gamma-tubulin binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000406-T1.utr3p1 | KJC3_000406-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR041470 |
| DBxref | InterPro:IPR042241 |
| DBxref | InterPro:IPR040457 |
| DBxref | PFAM:PF17681 |
| DBxref | PFAM:PF04130 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:761136..765905 - |
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