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KJC3_000414-T2, KJC3_000414-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000414-T2
Unique NameKJC3_000414-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:788759..790129+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000414-T2 ID=KJC3_000414-T2|Name=KJC3_000414-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1371bp|location=Sequence derived from alignment at ch1:788759..790129+ (Aspergillus niger KJC3)
GTCGGGCTAGTCTGCTCCATGCCACACACACACTAAGAGGAGGGGACGAG
CTGAAGACAGTCCCTCTGGATCTCTCTCTCCTTCCTTTGTCTTCATTAAT
GAGTTCGATGGTCTGATCATACAACAGATCTGATCAGCGTAAACCCCACC
GCTCAGCAGCTGGGGACATCCGCTTTCTAGCTATCCACCTGATCCATTTG
AGGAAAAGATCCAGACTCCCGCCCTAGCATCTATCTAGTGTAATAAACCC
TGCGATCCCGCGAGCACGCCATCATGGAATCCTCTGATTTGACCGCGCCG
TACGCCAGACAGGCCAACGTCTTATCTCCCACGCAACGATCTTCATCCCA
TTCGTCTCATCGTGAGCCACACCGCATGGCTGCCTTCGAAACGGTCACCG
TGCCTGACCAGGGCCAATCGCAACCAGTCAACGAGGTCACCCCCATCGTG
AGCAACTCTGACACATCCCGGCGCAACTATCATTCGACCGACGGTCTACG
GAACAGGGACTCAGGATCAACAAACAACAACACGGTCTCACGGGATCCCG
GTCAGCAGAACTCCCAGTGTGATTCGGAAGAACCGCGCGGCTCGTGGTAT
AGCCGGCTGGCGGAGAAATATGGAAGTTTGGAATTAGAGAATAAAGGCAG
CGTGGCCCGGGACCATCTTGCTTTGGGTATGTTTCGCCTGCTGTTGCTTT
TTTTGCTTTTTTCTTTTCTCGTCCGTATACGACCCAGCTAAACGGATCCC
CTTGGATACCTCTAGAACGAACCTTTCTGGCATGGCTGCGGACATCGCTA
GCCTTTGCGTCGATTGGCATTGCGGTAACCCAATTATTCCGTCTGAATAG
TGCTGGGTCCAACGCAAACAGCGCCAACATGTCGGCTCATATGTCTCCCC
TTTTGTCATCCGCTGCGTATGATCCCACTATAGGGGTAACATCTGCCTCA
TCACGGCTTCGGAGCATCGGTAAGCCGTTAGGGACTACTTTCATTGGAGT
TGCAATTTTGATCCTACTGGTTGGATTTCATCGCTACTTTGAGAGTCAGT
ATTGGATAATCCGGGGCAAGTTTCCAGCTAGTCGTGGTAGTGTTGCTTTG
ACAGCATTTGTGGCTGCTGCTTTGATTGTTACTGCTTTTGTTGTGATCCT
TGCTATTTCGCCCGGCGCGGTCGAAGTGTAAGGGATGGGTTCGGGAGAAG
CAAGGGGTTCCACGTGTTCTATACCGTTTTTCTTGATGGTTTTGTATGTA
TTGAAGCGAGCGAAACAAGGTGTTTGGAGATGTTGTGTTGCTTATAGGTA
CATAGCAGTAATTAGGTGATGACCATGAATGGTCAGATGAACAAAAGAGC
TACTCCACTATAGCAATCCAA
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Coding sequence (CDS) from alignment at ch1:788759..790129+

>KJC3_000414-T2 ID=KJC3_000414-T2|Name=KJC3_000414-T2|organism=Aspergillus niger KJC3|type=CDS|length=1434bp|location=Sequence derived from alignment at ch1:788759..790129+ (Aspergillus niger KJC3)
ATGGCTGCCTTCGAAACGGTCACCGTGCCTGACCAGGGCCAATCGCAACC
AGTCAACGAGGTCACCCCCATCGTGAGCAACTCTGACACATCCCGGCGCA
ACTATCATTCGACCGACGGTCTACGGAACAGGGACTCAGGATCAACAAAC
AACAACACGGTCTCACGGGATCCCGGTCAGCAGAACTCCCAGTGTGATTC
GGAAGAACCGCGCGGCTCGTGGTATAGCCGGCTGGCGGAGAAATATGGAA
GTTTGGAATTAGAGAATAAAGGCAGCGTGGCCCGGGACCATCTTGCTTTG
GAACGAACCTTTCTGGCATGGCTGCGGACATCGCTAGCCTTTGCGTCGAT
TGGCATTGCGGTAACCCAATTATTCCGTCTGAATAGTGCTGGGTCCAACG
CAAACAGCGCCAACATGTCGGCTCATATGTCTCCCCTTTTGTCATCCGCT
GCGTATGATCCCACTATAGGGGTAACATCTGCCTCATCACGGCTTCGGAG
CATCGGTAAGCCGTTAGGGACTACTTTCATTGGAGTTGCAATTTTGATCC
TACTGGTTGGATTTCATCGCTACTTTGAGAGTCAGTATTGGATAATCCGG
GGCAAGTTTCCAGCTAGTCGTGGTAGTGTTGCTTTGACAGCATTTGTGGC
TGCTGCTTTGATTGTTACTGCTTTTGTTGTGATCCTTGCTATTTCGCCCG
GCGCGGTCGAAGTGTAAATGGCTGCCTTCGAAACGGTCACCGTGCCTGAC
CAGGGCCAATCGCAACCAGTCAACGAGGTCACCCCCATCGTGAGCAACTC
TGACACATCCCGGCGCAACTATCATTCGACCGACGGTCTACGGAACAGGG
ACTCAGGATCAACAAACAACAACACGGTCTCACGGGATCCCGGTCAGCAG
AACTCCCAGTGTGATTCGGAAGAACCGCGCGGCTCGTGGTATAGCCGGCT
GGCGGAGAAATATGGAAGTTTGGAATTAGAGAATAAAGGCAGCGTGGCCC
GGGACCATCTTGCTTTGGAACGAACCTTTCTGGCATGGCTGCGGACATCG
CTAGCCTTTGCGTCGATTGGCATTGCGGTAACCCAATTATTCCGTCTGAA
TAGTGCTGGGTCCAACGCAAACAGCGCCAACATGTCGGCTCATATGTCTC
CCCTTTTGTCATCCGCTGCGTATGATCCCACTATAGGGGTAACATCTGCC
TCATCACGGCTTCGGAGCATCGGTAAGCCGTTAGGGACTACTTTCATTGG
AGTTGCAATTTTGATCCTACTGGTTGGATTTCATCGCTACTTTGAGAGTC
AGTATTGGATAATCCGGGGCAAGTTTCCAGCTAGTCGTGGTAGTGTTGCT
TTGACAGCATTTGTGGCTGCTGCTTTGATTGTTACTGCTTTTGTTGTGAT
CCTTGCTATTTCGCCCGGCGCGGTCGAAGTGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000414KJC3_000414Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000414-T2KJC3_000414-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000414-T2.utr5p1KJC3_000414-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_000414-T2.utr5p2KJC3_000414-T2.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000414-T2.exon1KJC3_000414-T2.exon1Aspergillus niger KJC3exon
KJC3_000414-T2.exon2KJC3_000414-T2.exon2Aspergillus niger KJC3exon
KJC3_000414-T2.exon3KJC3_000414-T2.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000414-T2.cdsKJC3_000414-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000414-T2.utr3p1KJC3_000414-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR003807
DBxrefPFAM:PF02656
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:788759..790129 +
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