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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:840277..842414+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000432-T1 ID=KJC3_000432-T1|Name=KJC3_000432-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2138bp|location=Sequence derived from alignment at ch1:840277..842414+ (Aspergillus niger KJC3)
TCACAGGCGCGACTACGGGGCACAGCAAGCACCCCCAGTGTCTTGAGCAA
TCACTCCATCTCTTTTACCTTCCCCAACTTCCTCTCCACTCCACCCAGCT
GGGCTGGCTGGGTTGCTGTCCCCCCAGGCACTACCTCCGCTGGGGAGGGT
GTGTCACTCCCCCGTTCATCCCCGTCACCATGGTTTACGACTGGGATGGC
AAGCGGGAAATCTGCTATCAGATGTATATCAAGGATAAGAAGGCCCTGGA
GGAGATTATGGAGTATATGAAGAATGTCTACCAGTTCGCCCCAAGGTGAG
TGACTTTACGCACGCGCCATCTCTGACACGACACGCATTGTGTGCTCCTG
TTCATACTTCTAATCCCAAACATCCCAAATCTATTCCTTCTCGTCTGCTA
TTTTGTCTAACCTCGCGATTTCATAGTAAACGTGCCTTTCAGACTCAATT
TAAACGGTGGGGCTTCCCTTCGAAACAGAATCCTGCACATAAAAACGCCA
AGCTGGTAGCACGAGTAAAGCAGCTATGGGAGAAGAATACAAGCCAGCGG
GATATGCTTCGCATACTGAATGAGGAGGGCTTCGAGATCAAGGAGCGGGA
GCTGATGCGGGTGCGGGCCAAGAACCGCTGGCTACTTCGGGTCCCTAACG
GGATGAAGTCGCAATCGCGCATTCAGACCCCAATCCAGCTGCCCGAGGAT
GAAGGGCTCCTTGCTCTCCAGCAGGAAGTATACAAAACCGAAGGACCGCC
CTTCGACGAGACCGAGAACCTCCCCACCCCCACAACAGACGACCCTACCT
CGCCCAATCTGCCTCCCGAAGTCCTTGCCAAGCGCAAGGAGCGCCTCGAG
CGGCTCAAAGCGGAAAGCGAAGAGCGTTGGGCGAGCAGGAAGCGTCGCCG
GCGGACTCGTGGATGGGCAGGGCTGCCGGCTGACCCGCCGGGACCTCCGC
GCTTCCCCTCCGAGACGACCATTGATGAGAGCAAAAAGTATCTCGGGCTG
GACAATGCGATGTATCGCCAGGTCCGGGATCAGTTCCAACGGATCTGTGA
AGAAGCAGGCTTCATCAAGAAGACCGTTGCGGGACCCGAGAGATGGCAGG
ACGCCAAGAACAAACTGATCGAGGGATCACCACATCTCCAGCAGGTGTTC
TGGCACGATCCCAACCAGTTAGAAGCTAAAACACTTGCCCTGGATGTGCT
ATGCACCGATGTGACGAAAAGGATGAGGACTTTGGAACGGCGAATGACCA
TTGCCGAGGCCAAGAATGTCCTCGGGATCAACCCGGAGGAGAGCCGCCAG
ATACGAAATGCGTTTTACAACACCCTGAAGGCGGACCATTTCACGAGCAA
GCTGGAGGCAGGCGACGAACATTGGAAGGAATTAAAGGACCAATGGATCC
AAAATTCGGAGCTCCTTCGTCAGATTCTTGCGCCCGGCCCCGCAGACCCG
GAGCATGCGGCGAAAGTGAAGGCCCTGGAGGTGCTGTGCCGCGACGTCAT
GAAGCGGCTCCGGGATGACCAGACCAAGCGGGATCCCGCCCGCAAACCAT
CCGTCCCTCACGCCCCGGCTCAGTCAGAACCAGAGAGTCCTCCAGTCAGC
AGCAGCTACGGGAGTGGCATTGCCAACGGAATCAGTACACTCGCCTCGCA
GGCGCTGGCGAGTGCCCCAAGTGATCTCAGTGACATGCAAATCGATCCCT
CCCTGCTGCAAGCTGCCAATGACCCTTCCTTCGCGACGGGCCCTTCGGAT
TCCGCAGCTGCGTTTGGCTATGTGGACCCGATGCTGGGGCCCTCCGTGGT
GCATGTACCTGTCTACCTTCGTATCCATCCGCAGAGTCCGCTGCACGGCG
ACTCGAAGACCTGGGTGGAGAAGCTGACGGCGCGGTCGGTGGCTGAGCTG
CAGCAGATTGTCGGCGAGAAGTACCCGGACGCGGTGGTCACGAAGATCGA
GGGGATGGACCGCGATGAGAAGGGCAATGAGATCCCGTTTGTAATTGACG
AAGATCATGAGCTCGATGCGTACTTGACCCACGTGCAGGGGCGCAAAGCC
ACCTTTGTGTTTTGCCTAAACTAACATACAGTTAATTCGTATACTCCGTA
GCTAGCAAAAAAGTGTTACTATAATAGGCCAATCCCAG back to topCoding sequence (CDS) from alignment at ch1:840277..842414+ >KJC3_000432-T1 ID=KJC3_000432-T1|Name=KJC3_000432-T1|organism=Aspergillus niger KJC3|type=CDS|length=3528bp|location=Sequence derived from alignment at ch1:840277..842414+ (Aspergillus niger KJC3)
ATGGTTTACGACTGGGATGGCAAGCGGGAAATCTGCTATCAGATGTATAT
CAAGGATAAGAAGGCCCTGGAGGAGATTATGGAGTATATGAAGAATGTCT
ACCAGTTCGCCCCAAGTAAACGTGCCTTTCAGACTCAATTTAAACGGTGG
GGCTTCCCTTCGAAACAGAATCCTGCACATAAAAACGCCAAGCTGGTAGC
ACGAGTAAAGCAGCTATGGGAGAAGAATACAAGCCAGCGGGATATGCTTC
GCATACTGAATGAGGAGGGCTTCGAGATCAAGGAGCGGGAGCTGATGCGG
GTGCGGGCCAAGAACCGCTGGCTACTTCGGGTCCCTAACGGGATGAAGTC
GCAATCGCGCATTCAGACCCCAATCCAGCTGCCCGAGGATGAAGGGCTCC
TTGCTCTCCAGCAGGAAGTATACAAAACCGAAGGACCGCCCTTCGACGAG
ACCGAGAACCTCCCCACCCCCACAACAGACGACCCTACCTCGCCCAATCT
GCCTCCCGAAGTCCTTGCCAAGCGCAAGGAGCGCCTCGAGCGGCTCAAAG
CGGAAAGCGAAGAGCGTTGGGCGAGCAGGAAGCGTCGCCGGCGGACTCGT
GGATGGGCAGGGCTGCCGGCTGACCCGCCGGGACCTCCGCGCTTCCCCTC
CGAGACGACCATTGATGAGAGCAAAAAGTATCTCGGGCTGGACAATGCGA
TGTATCGCCAGGTCCGGGATCAGTTCCAACGGATCTGTGAAGAAGCAGGC
TTCATCAAGAAGACCGTTGCGGGACCCGAGAGATGGCAGGACGCCAAGAA
CAAACTGATCGAGGGATCACCACATCTCCAGCAGGTGTTCTGGCACGATC
CCAACCAGTTAGAAGCTAAAACACTTGCCCTGGATGTGCTATGCACCGAT
GTGACGAAAAGGATGAGGACTTTGGAACGGCGAATGACCATTGCCGAGGC
CAAGAATGTCCTCGGGATCAACCCGGAGGAGAGCCGCCAGATACGAAATG
CGTTTTACAACACCCTGAAGGCGGACCATTTCACGAGCAAGCTGGAGGCA
GGCGACGAACATTGGAAGGAATTAAAGGACCAATGGATCCAAAATTCGGA
GCTCCTTCGTCAGATTCTTGCGCCCGGCCCCGCAGACCCGGAGCATGCGG
CGAAAGTGAAGGCCCTGGAGGTGCTGTGCCGCGACGTCATGAAGCGGCTC
CGGGATGACCAGACCAAGCGGGATCCCGCCCGCAAACCATCCGTCCCTCA
CGCCCCGGCTCAGTCAGAACCAGAGAGTCCTCCAGTCAGCAGCAGCTACG
GGAGTGGCATTGCCAACGGAATCAGTACACTCGCCTCGCAGGCGCTGGCG
AGTGCCCCAAGTGATCTCAGTGACATGCAAATCGATCCCTCCCTGCTGCA
AGCTGCCAATGACCCTTCCTTCGCGACGGGCCCTTCGGATTCCGCAGCTG
CGTTTGGCTATGTGGACCCGATGCTGGGGCCCTCCGTGGTGCATGTACCT
GTCTACCTTCGTATCCATCCGCAGAGTCCGCTGCACGGCGACTCGAAGAC
CTGGGTGGAGAAGCTGACGGCGCGGTCGGTGGCTGAGCTGCAGCAGATTG
TCGGCGAGAAGTACCCGGACGCGGTGGTCACGAAGATCGAGGGGATGGAC
CGCGATGAGAAGGGCAATGAGATCCCGTTTGTAATTGACGAAGATCATGA
GCTCGATGCGTACTTGACCCACGTGCAGGGGCGCAAAGCCACCTTTGTGT
TTTGCCTAAACTAAATGGTTTACGACTGGGATGGCAAGCGGGAAATCTGC
TATCAGATGTATATCAAGGATAAGAAGGCCCTGGAGGAGATTATGGAGTA
TATGAAGAATGTCTACCAGTTCGCCCCAAGTAAACGTGCCTTTCAGACTC
AATTTAAACGGTGGGGCTTCCCTTCGAAACAGAATCCTGCACATAAAAAC
GCCAAGCTGGTAGCACGAGTAAAGCAGCTATGGGAGAAGAATACAAGCCA
GCGGGATATGCTTCGCATACTGAATGAGGAGGGCTTCGAGATCAAGGAGC
GGGAGCTGATGCGGGTGCGGGCCAAGAACCGCTGGCTACTTCGGGTCCCT
AACGGGATGAAGTCGCAATCGCGCATTCAGACCCCAATCCAGCTGCCCGA
GGATGAAGGGCTCCTTGCTCTCCAGCAGGAAGTATACAAAACCGAAGGAC
CGCCCTTCGACGAGACCGAGAACCTCCCCACCCCCACAACAGACGACCCT
ACCTCGCCCAATCTGCCTCCCGAAGTCCTTGCCAAGCGCAAGGAGCGCCT
CGAGCGGCTCAAAGCGGAAAGCGAAGAGCGTTGGGCGAGCAGGAAGCGTC
GCCGGCGGACTCGTGGATGGGCAGGGCTGCCGGCTGACCCGCCGGGACCT
CCGCGCTTCCCCTCCGAGACGACCATTGATGAGAGCAAAAAGTATCTCGG
GCTGGACAATGCGATGTATCGCCAGGTCCGGGATCAGTTCCAACGGATCT
GTGAAGAAGCAGGCTTCATCAAGAAGACCGTTGCGGGACCCGAGAGATGG
CAGGACGCCAAGAACAAACTGATCGAGGGATCACCACATCTCCAGCAGGT
GTTCTGGCACGATCCCAACCAGTTAGAAGCTAAAACACTTGCCCTGGATG
TGCTATGCACCGATGTGACGAAAAGGATGAGGACTTTGGAACGGCGAATG
ACCATTGCCGAGGCCAAGAATGTCCTCGGGATCAACCCGGAGGAGAGCCG
CCAGATACGAAATGCGTTTTACAACACCCTGAAGGCGGACCATTTCACGA
GCAAGCTGGAGGCAGGCGACGAACATTGGAAGGAATTAAAGGACCAATGG
ATCCAAAATTCGGAGCTCCTTCGTCAGATTCTTGCGCCCGGCCCCGCAGA
CCCGGAGCATGCGGCGAAAGTGAAGGCCCTGGAGGTGCTGTGCCGCGACG
TCATGAAGCGGCTCCGGGATGACCAGACCAAGCGGGATCCCGCCCGCAAA
CCATCCGTCCCTCACGCCCCGGCTCAGTCAGAACCAGAGAGTCCTCCAGT
CAGCAGCAGCTACGGGAGTGGCATTGCCAACGGAATCAGTACACTCGCCT
CGCAGGCGCTGGCGAGTGCCCCAAGTGATCTCAGTGACATGCAAATCGAT
CCCTCCCTGCTGCAAGCTGCCAATGACCCTTCCTTCGCGACGGGCCCTTC
GGATTCCGCAGCTGCGTTTGGCTATGTGGACCCGATGCTGGGGCCCTCCG
TGGTGCATGTACCTGTCTACCTTCGTATCCATCCGCAGAGTCCGCTGCAC
GGCGACTCGAAGACCTGGGTGGAGAAGCTGACGGCGCGGTCGGTGGCTGA
GCTGCAGCAGATTGTCGGCGAGAAGTACCCGGACGCGGTGGTCACGAAGA
TCGAGGGGATGGACCGCGATGAGAAGGGCAATGAGATCCCGTTTGTAATT
GACGAAGATCATGAGCTCGATGCGTACTTGACCCACGTGCAGGGGCGCAA
AGCCACCTTTGTGTTTTGCCTAAACTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000432-T1.utr5p1 | KJC3_000432-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000432-T1.utr3p1 | KJC3_000432-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR025676 |
| DBxref | PFAM:PF14420 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:840277..842414 + |
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