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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1003453..1005468- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000487-T1 ID=KJC3_000487-T1|Name=KJC3_000487-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2016bp|location=Sequence derived from alignment at ch1:1003453..1005468- (Aspergillus niger KJC3)
ATGCTTCAATGGAGCTCGCGCTGCCTTCCTGGGTTTAGCTTTCTGCTACT
GATAGCCCTTCTCCACCTGGCCTTCTTCGATAATGCGGACTGGAACCTCA
GGAAAAGTCAGAGGCCATCGCCACCTAGGAAACCGGTTCATGATCCTAAC
CGTGTACTGACCTTGGCGCAAGCCTTGTTCGCCATATACACTGTGGTAAT
TCACCTGAACATGTTTTCCTTCACACTGCGACTTACATGGTCGCTGTTCT
GGGTGACGAGGCGAACGCGGCAGGTTTTTCAAAGGCGCATCGGGCCCAAT
GCGAGCAAACTGGACACTACAGGCGACACCCTCCTGGATTTCAGCACCTT
GCAGGGCTCAGCCAATGAACATATCTTACCAGACTCACGGGGTATAGACA
TAATTCATGCCATTATTGTCCCCAACTACCGTGAGGACGTGGATACACTT
CGGACTACTCTAAGCGTATTGGAAAGCCATCCACATGCAAGATTTCACTA
TGAGGTCCGGCCTAGTCTGGAATGTGGTCGCCGTTGAATGATGCTTACTC
GTACTAGATCTACCTTGCCATGGAGGAGAAAGAGACAAACGCAGTCGAAA
AGGCAATGAAGCTAGCCGCCACGTTCGACGCCTCGTTCCGCACCATTCAA
ACCACCTTTCACCCTTCTGGAATTGACGGTGAGATTACCGGCAAGGGTTC
CAACGTAGCATATGCGGCACGTCATATTGTCGGTGTCCATCATAAGGCCC
TGCGAGTGGAAACTTGTGATGTTATTATCACAGTCATAGATGGTACGCCA
ATCTCCCATCCATTCCCTCTTCCAGCATAGTTACTGACCCGGGGGTAAAG
CCGATACCCATCTTTCCAGGGATTACTTCACCGAGATACAGCGCATTCGT
GACTTGGATCTTCTTAAGGCTGAGCGTACCCTATACTGCTGTCCCATCAT
ATTTGATCGAAATTCACTTGAAAGTCCCGTCCTGGTGCGATGTGCCGATC
TCCTTTGGGGATTCGCCGGCTTATCCACCATGTACCCAGGGACCGTGCTT
GCTATTCCCACGTCAGTTTACTCGTTACCGCTATCCCTAGCAGAAAAGGT
TGGGGGATGGGATAGCGATCCAACGGCGATTGGAGAGGACATGCACATGC
TGCTGAAGTGCTACTTTGAGACTTCGGGTAACTTGATAACACAGGCCATC
TATGTCCCCGCCAGTCAGTGTAATGTTTCGAGCGACGCTCGCCGAGGATG
GCGGTGCTACCTAGATACATGCGTTGCTCGATACAGACAAGCACTGCGAC
ACATGTGGGGGGCTCTAGATTCAGGATATGCGGTACGACAGACGATGGGC
CATCTGCGCTTCCGACGTTGCTTTGTCCTGCGGCCACGCCAGCTAGCTCT
CACCCACCTCCTCTGGGAGGCTCATTTCCTGCCCTGCCATGTGACGATCC
TTCTGGTGTTCTCCGTGTTATATACAATATGCAACCCCAGTGGCCATATG
CACCCGACCTTGGCATTCGCATTCAACTTCACCAATACCCTTCGTACTTG
CTCGTTCGTCGGCATGAACTTGGCTATCTCGCTATACGACCGCTGGCATC
AGATCTGTGTTGACCGGCGCATGCAGGACATGCATGCCGCTCAAATTCCC
GGCACTGGCTGCTCGCGACGCAAGTGGTACATGCCGCAGTGTCTGCTGGA
GCGAGTTATTTTTCCCATTTCCGGCACACTGTATGGTGCCATCCCTACGC
TACAGGCCGCTTTGTCGCATTTTTGGACTGATCGGCTGGAGTACCGGGTG
AGTAAAAAGCCTAGCTTTGAGGCCGAGTCCGTGGCCGAAGCGCCGATCTG
CGCACCGGCCCATGTTCATATTGCTAATGAGTGCGCTTGACTTTACCCCT
TATCGTGTTTCTATCTTGGTGCAAATGTTTTGATTGGACGATAGCAGGTT
GAAGTCGTTTTTCATAACATGGTGGCGTCTTTACATAGTACTCTCGACCG
ACACTACATAATATCC back to topCoding sequence (CDS) from alignment at ch1:1003453..1005468- >KJC3_000487-T1 ID=KJC3_000487-T1|Name=KJC3_000487-T1|organism=Aspergillus niger KJC3|type=CDS|length=5337bp|location=Sequence derived from alignment at ch1:1003453..1005468- (Aspergillus niger KJC3)
CCGATACCCATCTTTCCAGGGATTACTTCACCGAGATACAGCGCATTCGT
GACTTGGATCTTCTTAAGGCTGAGCGTACCCTATACTGCTGTCCCATCAT
ATTTGATCGAAATTCACTTGAAAGTCCCGTCCTGGTGCGATGTGCCGATC
TCCTTTGGGGATTCGCCGGCTTATCCACCATGTACCCAGGGACCGTGCTT
GCTATTCCCACGTCAGTTTACTCGTTACCGCTATCCCTAGCAGAAAAGGT
TGGGGGATGGGATAGCGATCCAACGGCGATTGGAGAGGACATGCACATGC
TGCTGAAGTGCTACTTTGAGACTTCGGGTAACTTGATAACACAGGCCATC
TATGTCCCCGCCAGTCAGTGTAATGTTTCGAGCGACGCTCGCCGAGGATG
GCGGTGCTACCTAGATACATGCGTTGCTCGATACAGACAAGCACTGCGAC
ACATGTGGGGGGCTCTAGATTCAGGATATGCGGTACGACAGACGATGGGC
CATCTGCGCTTCCGACGTTGCTTTGTCCTGCGGCCACGCCAGCTAGCTCT
CACCCACCTCCTCTGGGAGGCTCATTTCCTGCCCTGCCATGTGACGATCC
TTCTGGTGTTCTCCGTGTTATATACAATATGCAACCCCAGTGGCCATATG
CACCCGACCTTGGCATTCGCATTCAACTTCACCAATACCCTTCGTACTTG
CTCGTTCGTCGGCATGAACTTGGCTATCTCGCTATACGACCGCTGGCATC
AGATCTGTGTTGACCGGCGCATGCAGGACATGCATGCCGCTCAAATTCCC
GGCACTGGCTGCTCGCGACGCAAGTGGTACATGCCGCAGTGTCTGCTGGA
GCGAGTTATTTTTCCCATTTCCGGCACACTGTATGGTGCCATCCCTACGC
TACAGGCCGCTTTGTCGCATTTTTGGACTGATCGGCTGGAGTACCGGGTG
AGTAAAAAGCCTAGCTTTGAGGCCGAGTCCGTGGCCGAAGCGCCGATCTG
CGCACCGGCCCATGTTCATATTGCTAATGAGTGCGCTTGAATCTACCTTG
CCATGGAGGAGAAAGAGACAAACGCAGTCGAAAAGGCAATGAAGCTAGCC
GCCACGTTCGACGCCTCGTTCCGCACCATTCAAACCACCTTTCACCCTTC
TGGAATTGACGGTGAGATTACCGGCAAGGGTTCCAACGTAGCATATGCGG
CACGTCATATTGTCGGTGTCCATCATAAGGCCCTGCGAGTGGAAACTTGT
GATGTTATTATCACAGTCATAGATGATGCTTCAATGGAGCTCGCGCTGCC
TTCCTGGGTTTAGCTTTCTGCTACTGATAGCCCTTCTCCACCTGGCCTTC
TTCGATAATGCGGACTGGAACCTCAGGAAAAGTCAGAGGCCATCGCCACC
TAGGAAACCGGTTCATGATCCTAACCGTGTACTGACCTTGGCGCAAGCCT
TGTTCGCCATATACACTGTGGTAATTCACCTGAACATGTTTTCCTTCACA
CTGCGACTTACATGGTCGCTGTTCTGGGTGACGAGGCGAACGCGGCAGGT
TTTTCAAAGGCGCATCGGGCCCAATGCGAGCAAACTGGACACTACAGGCG
ACACCCTCCTGGATTTCAGCACCTTGCAGGGCTCAGCCAATGAACATATC
TTACCAGACTCACGGGGTATAGACATAATTCATGCCATTATTGTCCCCAA
CTACCGTGAGGACGTGGATACACTTCGGACTACTCTAAGCGTATTGGAAA
GCCATCCACATGCAAGATTTCACTATGAGCCGATACCCATCTTTCCAGGG
ATTACTTCACCGAGATACAGCGCATTCGTGACTTGGATCTTCTTAAGGCT
GAGCGTACCCTATACTGCTGTCCCATCATATTTGATCGAAATTCACTTGA
AAGTCCCGTCCTGGTGCGATGTGCCGATCTCCTTTGGGGATTCGCCGGCT
TATCCACCATGTACCCAGGGACCGTGCTTGCTATTCCCACGTCAGTTTAC
TCGTTACCGCTATCCCTAGCAGAAAAGGTTGGGGGATGGGATAGCGATCC
AACGGCGATTGGAGAGGACATGCACATGCTGCTGAAGTGCTACTTTGAGA
CTTCGGGTAACTTGATAACACAGGCCATCTATGTCCCCGCCAGTCAGTGT
AATGTTTCGAGCGACGCTCGCCGAGGATGGCGGTGCTACCTAGATACATG
CGTTGCTCGATACAGACAAGCACTGCGACACATGTGGGGGGCTCTAGATT
CAGGATATGCGGTACGACAGACGATGGGCCATCTGCGCTTCCGACGTTGC
TTTGTCCTGCGGCCACGCCAGCTAGCTCTCACCCACCTCCTCTGGGAGGC
TCATTTCCTGCCCTGCCATGTGACGATCCTTCTGGTGTTCTCCGTGTTAT
ATACAATATGCAACCCCAGTGGCCATATGCACCCGACCTTGGCATTCGCA
TTCAACTTCACCAATACCCTTCGTACTTGCTCGTTCGTCGGCATGAACTT
GGCTATCTCGCTATACGACCGCTGGCATCAGATCTGTGTTGACCGGCGCA
TGCAGGACATGCATGCCGCTCAAATTCCCGGCACTGGCTGCTCGCGACGC
AAGTGGTACATGCCGCAGTGTCTGCTGGAGCGAGTTATTTTTCCCATTTC
CGGCACACTGTATGGTGCCATCCCTACGCTACAGGCCGCTTTGTCGCATT
TTTGGACTGATCGGCTGGAGTACCGGGTGAGTAAAAAGCCTAGCTTTGAG
GCCGAGTCCGTGGCCGAAGCGCCGATCTGCGCACCGGCCCATGTTCATAT
TGCTAATGAGTGCGCTTGAATCTACCTTGCCATGGAGGAGAAAGAGACAA
ACGCAGTCGAAAAGGCAATGAAGCTAGCCGCCACGTTCGACGCCTCGTTC
CGCACCATTCAAACCACCTTTCACCCTTCTGGAATTGACGGTGAGATTAC
CGGCAAGGGTTCCAACGTAGCATATGCGGCACGTCATATTGTCGGTGTCC
ATCATAAGGCCCTGCGAGTGGAAACTTGTGATGTTATTATCACAGTCATA
GATGATGCTTCAATGGAGCTCGCGCTGCCTTCCTGGGTTTAGCTTTCTGC
TACTGATAGCCCTTCTCCACCTGGCCTTCTTCGATAATGCGGACTGGAAC
CTCAGGAAAAGTCAGAGGCCATCGCCACCTAGGAAACCGGTTCATGATCC
TAACCGTGTACTGACCTTGGCGCAAGCCTTGTTCGCCATATACACTGTGG
TAATTCACCTGAACATGTTTTCCTTCACACTGCGACTTACATGGTCGCTG
TTCTGGGTGACGAGGCGAACGCGGCAGGTTTTTCAAAGGCGCATCGGGCC
CAATGCGAGCAAACTGGACACTACAGGCGACACCCTCCTGGATTTCAGCA
CCTTGCAGGGCTCAGCCAATGAACATATCTTACCAGACTCACGGGGTATA
GACATAATTCATGCCATTATTGTCCCCAACTACCGTGAGGACGTGGATAC
ACTTCGGACTACTCTAAGCGTATTGGAAAGCCATCCACATGCAAGATTTC
ACTATGAGCCGATACCCATCTTTCCAGGGATTACTTCACCGAGATACAGC
GCATTCGTGACTTGGATCTTCTTAAGGCTGAGCGTACCCTATACTGCTGT
CCCATCATATTTGATCGAAATTCACTTGAAAGTCCCGTCCTGGTGCGATG
TGCCGATCTCCTTTGGGGATTCGCCGGCTTATCCACCATGTACCCAGGGA
CCGTGCTTGCTATTCCCACGTCAGTTTACTCGTTACCGCTATCCCTAGCA
GAAAAGGTTGGGGGATGGGATAGCGATCCAACGGCGATTGGAGAGGACAT
GCACATGCTGCTGAAGTGCTACTTTGAGACTTCGGGTAACTTGATAACAC
AGGCCATCTATGTCCCCGCCAGTCAGTGTAATGTTTCGAGCGACGCTCGC
CGAGGATGGCGGTGCTACCTAGATACATGCGTTGCTCGATACAGACAAGC
ACTGCGACACATGTGGGGGGCTCTAGATTCAGGATATGCGGTACGACAGA
CGATGGGCCATCTGCGCTTCCGACGTTGCTTTGTCCTGCGGCCACGCCAG
CTAGCTCTCACCCACCTCCTCTGGGAGGCTCATTTCCTGCCCTGCCATGT
GACGATCCTTCTGGTGTTCTCCGTGTTATATACAATATGCAACCCCAGTG
GCCATATGCACCCGACCTTGGCATTCGCATTCAACTTCACCAATACCCTT
CGTACTTGCTCGTTCGTCGGCATGAACTTGGCTATCTCGCTATACGACCG
CTGGCATCAGATCTGTGTTGACCGGCGCATGCAGGACATGCATGCCGCTC
AAATTCCCGGCACTGGCTGCTCGCGACGCAAGTGGTACATGCCGCAGTGT
CTGCTGGAGCGAGTTATTTTTCCCATTTCCGGCACACTGTATGGTGCCAT
CCCTACGCTACAGGCCGCTTTGTCGCATTTTTGGACTGATCGGCTGGAGT
ACCGGGTGAGTAAAAAGCCTAGCTTTGAGGCCGAGTCCGTGGCCGAAGCG
CCGATCTGCGCACCGGCCCATGTTCATATTGCTAATGAGTGCGCTTGAAT
CTACCTTGCCATGGAGGAGAAAGAGACAAACGCAGTCGAAAAGGCAATGA
AGCTAGCCGCCACGTTCGACGCCTCGTTCCGCACCATTCAAACCACCTTT
CACCCTTCTGGAATTGACGGTGAGATTACCGGCAAGGGTTCCAACGTAGC
ATATGCGGCACGTCATATTGTCGGTGTCCATCATAAGGCCCTGCGAGTGG
AAACTTGTGATGTTATTATCACAGTCATAGATGATGCTTCAATGGAGCTC
GCGCTGCCTTCCTGGGTTTAGCTTTCTGCTACTGATAGCCCTTCTCCACC
TGGCCTTCTTCGATAATGCGGACTGGAACCTCAGGAAAAGTCAGAGGCCA
TCGCCACCTAGGAAACCGGTTCATGATCCTAACCGTGTACTGACCTTGGC
GCAAGCCTTGTTCGCCATATACACTGTGGTAATTCACCTGAACATGTTTT
CCTTCACACTGCGACTTACATGGTCGCTGTTCTGGGTGACGAGGCGAACG
CGGCAGGTTTTTCAAAGGCGCATCGGGCCCAATGCGAGCAAACTGGACAC
TACAGGCGACACCCTCCTGGATTTCAGCACCTTGCAGGGCTCAGCCAATG
AACATATCTTACCAGACTCACGGGGTATAGACATAATTCATGCCATTATT
GTCCCCAACTACCGTGAGGACGTGGATACACTTCGGACTACTCTAAGCGT
ATTGGAAAGCCATCCACATGCAAGATTTCACTATGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000487-T1.utr3p1 | KJC3_000487-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GT2_Glyco_trans_2_3 |
| DBxref | InterPro:IPR029044 |
| DBxref | InterPro:IPR001173 |
| DBxref | PFAM:PF13632 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1003453..1005468 - |
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