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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1035052..1037247- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000499-T1 ID=KJC3_000499-T1|Name=KJC3_000499-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2196bp|location=Sequence derived from alignment at ch1:1035052..1037247- (Aspergillus niger KJC3)
CCTCCTTCTAAATGGAATTCCTCGGATCAAATATCCAGTAGAAAACCATC
AGACTATGCCCGCTGAGCCTAAGGTAACGAAGGAGAATGGTAGCAGCTCG
GGCAGACCCTATCGGTCCCATGCGCATCCCGCATGTCTACCTTGTCGGAA
ACGCAAGTCGCGATGCCGCACGAGAGATTCCTCCGCTACGTGTATGATGT
GTTTGGCTCATGCAACCGACTGCATTTTCCCTCCTGCTGATACCCTCGTC
CAAAGGAAGCGAACTGTCAATTTGCGGCGAATTGTACCCAAGACAGCTCG
AACAGAGCGGCCCTCCACCCCTCGGGTCGTACTCCCATCACCCAGGACCA
ACAAAGCTTCCGACACACCACAACTTACGGGACACCACCAGCCAGCTCAG
CCTTCCACAGCATATTCAGACGGCAAAGTTGCAAGTCTGATGGACGTGGT
CGGCGATACCGGGGACGACAGCTCTCATGTCGTCAGCCCAGTCGTTGCTG
ACGACAGTAGTATACTAGAAGAATATCTGTTCACCGTTCCAGATAATCGA
AGGCTTTGCTTGATGCACACCAATTCAAAACCCAGTCGACTTATGCGGCA
GGTACTGTTCAATACCATTCCGAGGCGTCCATTGGGGGTGTACTCCGGTC
AATCTCTCCCATCTATGAAGTGCGAGCTCATCGAAAAGTACCTCGAGCCT
ACGGCAAAGGATGTTGTGAGCCTGCAAGTCAATGCACGCTATTGTAGGGG
GTATTCGGTTACTGACTGGTTACATATAGGTTCTTTCAATATGCCAATAT
ATGCTTCCCTGTATTTGACGAGGCGTCGTTTATGAATGCCTACTGCACCC
GCAAAGAGGAAATATCTCCAGCTCTCCTCTGCAATCTATATGCCAACTCC
CTTATCTACTGGGACAATTCACCCAAGTTATGCTTAACTCGCACACCCGA
CATTCGCTATATCTGGAATCAAGCTAACGAGGCCCTTCATTCCGAACTTT
TCTTGTGCCCTGGTATATCAACTGTACTGGCGATGCTGCTAAACGTCTGC
GGTAGACCAAGCACCTCGATCTTTGGTAATGGGGGTATGGTAGGGACGGC
GGTAGCCTTATCCAACGCCTTGGGCTTGAATCGAGATCCCTGCCACTGGA
ACATCTCTACTCTTGAGAAGGGACTTCGCATCCGCATTTGGTGGTTGGTG
GTGATTCAAGATCGATGGTAGGATATTCCGCTTCTCGAGTTCTTCGCTTC
CACACTAACATTAACCAGGTGCAGCCTCGCCTACGGAACACCGCTTCAGG
TTCATCGAGCCCAATACGACGTTCCGTTTCCGACCATGGAGTATCTTTGT
TCTTCTTCCGCAATGCTATCCCAAGAAGCCGCAGCTTCAATCTTCATCGC
CTTCACAACGTTAACAGAAGTGTTGGGTCAATACCTTGAATACATCTATC
ACGTTTCCAGCCCCGTCAGAAAGACGATCACTTCGCTCTCACACCTGCTC
ACTAACTGGGAAGACTCCCTCGACATCAACACCCGCCACATAATCCTCCG
CGGAACCGACCTAAGCACCCCCGGCGTGGCAAACTTGCGCCTAGCATACT
TATCCGTGAAGCTCCTGCTCCGACGCATCGCACTCGACATGGATGACGAG
CATACTGAGACTTCCAACTTCGACAATGGGAATGATTCTAACTGTTCCTC
CTTCTCATTTACACAAGTCGAGCGCGCAGCAGAAGAGATAGTGCATCTCG
TAGGGGAGCTGGACGAGCAGCAGCTACGTGGATTTTGGGTCCCAGTTCAG
GCGTATTCGCTCACGTCTGCGACGACATTCCTTCTACGGAGTGGGCTGCG
CAGGGTTCAATTGCATTCCGCGAATAGTGACAGCAATCCACCACTAGATT
TGGCTAAAGAGATGGTTGCTACACTGCAGTCTCATCGGCAGCAGTTTCGA
TGGGATCTGGGGGATGATTGTTTGGCAAAGTGTGCTGAGCTGGTAGAGAG
GGTTGCTTCTCTAGAGAATGATGGGATGAGCTTGTCGTTGAATGAGGAAT
TGTCTGATCCATCTCATATTCTCGATATAGACACATCGATTCTGGATGAG
GTGTTTTGGGATATGCCGTGTATGGGGAATACCCTTAATTTATAACAACA
GTTGCGCTCATTAATGAATCATTTTCAGCATTATATCTTTATAACT back to topCoding sequence (CDS) from alignment at ch1:1035052..1037247- >KJC3_000499-T1 ID=KJC3_000499-T1|Name=KJC3_000499-T1|organism=Aspergillus niger KJC3|type=CDS|length=7368bp|location=Sequence derived from alignment at ch1:1035052..1037247- (Aspergillus niger KJC3)
GTGCAGCCTCGCCTACGGAACACCGCTTCAGGTTCATCGAGCCCAATACG
ACGTTCCGTTTCCGACCATGGAGTATCTTTGTTCTTCTTCCGCAATGCTA
TCCCAAGAAGCCGCAGCTTCAATCTTCATCGCCTTCACAACGTTAACAGA
AGTGTTGGGTCAATACCTTGAATACATCTATCACGTTTCCAGCCCCGTCA
GAAAGACGATCACTTCGCTCTCACACCTGCTCACTAACTGGGAAGACTCC
CTCGACATCAACACCCGCCACATAATCCTCCGCGGAACCGACCTAAGCAC
CCCCGGCGTGGCAAACTTGCGCCTAGCATACTTATCCGTGAAGCTCCTGC
TCCGACGCATCGCACTCGACATGGATGACGAGCATACTGAGACTTCCAAC
TTCGACAATGGGAATGATTCTAACTGTTCCTCCTTCTCATTTACACAAGT
CGAGCGCGCAGCAGAAGAGATAGTGCATCTCGTAGGGGAGCTGGACGAGC
AGCAGCTACGTGGATTTTGGGTCCCAGTTCAGGCGTATTCGCTCACGTCT
GCGACGACATTCCTTCTACGGAGTGGGCTGCGCAGGGTTCAATTGCATTC
CGCGAATAGTGACAGCAATCCACCACTAGATTTGGCTAAAGAGATGGTTG
CTACACTGCAGTCTCATCGGCAGCAGTTTCGATGGGATCTGGGGGATGAT
TGTTTGGCAAAGTGTGCTGAGCTGGTAGAGAGGGTTGCTTCTCTAGAGAA
TGATGGGATGAGCTTGTCGTTGAATGAGGAATTGTCTGATCCATCTCATA
TTCTCGATATAGACACATCGATTCTGGATGAGGTGTTTTGGGATATGCCG
TGTATGGGGAATACCCTTAATTTATAAGTTCTTTCAATATGCCAATATAT
GCTTCCCTGTATTTGACGAGGCGTCGTTTATGAATGCCTACTGCACCCGC
AAAGAGGAAATATCTCCAGCTCTCCTCTGCAATCTATATGCCAACTCCCT
TATCTACTGGGACAATTCACCCAAGTTATGCTTAACTCGCACACCCGACA
TTCGCTATATCTGGAATCAAGCTAACGAGGCCCTTCATTCCGAACTTTTC
TTGTGCCCTGGTATATCAACTGTACTGGCGATGCTGCTAAACGTCTGCGG
TAGACCAAGCACCTCGATCTTTGGTAATGGGGGTATGGTAGGGACGGCGG
TAGCCTTATCCAACGCCTTGGGCTTGAATCGAGATCCCTGCCACTGGAAC
ATCTCTACTCTTGAGAAGGGACTTCGCATCCGCATTTGGTGGTTGGTGGT
GATTCAAGATCGATGGAAGCGAACTGTCAATTTGCGGCGAATTGTACCCA
AGACAGCTCGAACAGAGCGGCCCTCCACCCCTCGGGTCGTACTCCCATCA
CCCAGGACCAACAAAGCTTCCGACACACCACAACTTACGGGACACCACCA
GCCAGCTCAGCCTTCCACAGCATATTCAGACGGCAAAGTTGCAAGTCTGA
TGGACGTGGTCGGCGATACCGGGGACGACAGCTCTCATGTCGTCAGCCCA
GTCGTTGCTGACGACAGTAGTATACTAGAAGAATATCTGTTCACCGTTCC
AGATAATCGAAGGCTTTGCTTGATGCACACCAATTCAAAACCCAGTCGAC
TTATGCGGCAGGTACTGTTCAATACCATTCCGAGGCGTCCATTGGGGGTG
TACTCCGGTCAATCTCTCCCATCTATGAAGTGCGAGCTCATCGAAAAGTA
CCTCGAGCCTACGGCAAAGGATGTTGTGAGCCTATGTCTACCTTGTCGGA
AACGCAAGTCGCGATGCCGCACGAGAGATTCCTCCGCTACGTGTGCAGCC
TCGCCTACGGAACACCGCTTCAGGTTCATCGAGCCCAATACGACGTTCCG
TTTCCGACCATGGAGTATCTTTGTTCTTCTTCCGCAATGCTATCCCAAGA
AGCCGCAGCTTCAATCTTCATCGCCTTCACAACGTTAACAGAAGTGTTGG
GTCAATACCTTGAATACATCTATCACGTTTCCAGCCCCGTCAGAAAGACG
ATCACTTCGCTCTCACACCTGCTCACTAACTGGGAAGACTCCCTCGACAT
CAACACCCGCCACATAATCCTCCGCGGAACCGACCTAAGCACCCCCGGCG
TGGCAAACTTGCGCCTAGCATACTTATCCGTGAAGCTCCTGCTCCGACGC
ATCGCACTCGACATGGATGACGAGCATACTGAGACTTCCAACTTCGACAA
TGGGAATGATTCTAACTGTTCCTCCTTCTCATTTACACAAGTCGAGCGCG
CAGCAGAAGAGATAGTGCATCTCGTAGGGGAGCTGGACGAGCAGCAGCTA
CGTGGATTTTGGGTCCCAGTTCAGGCGTATTCGCTCACGTCTGCGACGAC
ATTCCTTCTACGGAGTGGGCTGCGCAGGGTTCAATTGCATTCCGCGAATA
GTGACAGCAATCCACCACTAGATTTGGCTAAAGAGATGGTTGCTACACTG
CAGTCTCATCGGCAGCAGTTTCGATGGGATCTGGGGGATGATTGTTTGGC
AAAGTGTGCTGAGCTGGTAGAGAGGGTTGCTTCTCTAGAGAATGATGGGA
TGAGCTTGTCGTTGAATGAGGAATTGTCTGATCCATCTCATATTCTCGAT
ATAGACACATCGATTCTGGATGAGGTGTTTTGGGATATGCCGTGTATGGG
GAATACCCTTAATTTATAAGTTCTTTCAATATGCCAATATATGCTTCCCT
GTATTTGACGAGGCGTCGTTTATGAATGCCTACTGCACCCGCAAAGAGGA
AATATCTCCAGCTCTCCTCTGCAATCTATATGCCAACTCCCTTATCTACT
GGGACAATTCACCCAAGTTATGCTTAACTCGCACACCCGACATTCGCTAT
ATCTGGAATCAAGCTAACGAGGCCCTTCATTCCGAACTTTTCTTGTGCCC
TGGTATATCAACTGTACTGGCGATGCTGCTAAACGTCTGCGGTAGACCAA
GCACCTCGATCTTTGGTAATGGGGGTATGGTAGGGACGGCGGTAGCCTTA
TCCAACGCCTTGGGCTTGAATCGAGATCCCTGCCACTGGAACATCTCTAC
TCTTGAGAAGGGACTTCGCATCCGCATTTGGTGGTTGGTGGTGATTCAAG
ATCGATGGAAGCGAACTGTCAATTTGCGGCGAATTGTACCCAAGACAGCT
CGAACAGAGCGGCCCTCCACCCCTCGGGTCGTACTCCCATCACCCAGGAC
CAACAAAGCTTCCGACACACCACAACTTACGGGACACCACCAGCCAGCTC
AGCCTTCCACAGCATATTCAGACGGCAAAGTTGCAAGTCTGATGGACGTG
GTCGGCGATACCGGGGACGACAGCTCTCATGTCGTCAGCCCAGTCGTTGC
TGACGACAGTAGTATACTAGAAGAATATCTGTTCACCGTTCCAGATAATC
GAAGGCTTTGCTTGATGCACACCAATTCAAAACCCAGTCGACTTATGCGG
CAGGTACTGTTCAATACCATTCCGAGGCGTCCATTGGGGGTGTACTCCGG
TCAATCTCTCCCATCTATGAAGTGCGAGCTCATCGAAAAGTACCTCGAGC
CTACGGCAAAGGATGTTGTGAGCCTATGTCTACCTTGTCGGAAACGCAAG
TCGCGATGCCGCACGAGAGATTCCTCCGCTACGTGTGCAGCCTCGCCTAC
GGAACACCGCTTCAGGTTCATCGAGCCCAATACGACGTTCCGTTTCCGAC
CATGGAGTATCTTTGTTCTTCTTCCGCAATGCTATCCCAAGAAGCCGCAG
CTTCAATCTTCATCGCCTTCACAACGTTAACAGAAGTGTTGGGTCAATAC
CTTGAATACATCTATCACGTTTCCAGCCCCGTCAGAAAGACGATCACTTC
GCTCTCACACCTGCTCACTAACTGGGAAGACTCCCTCGACATCAACACCC
GCCACATAATCCTCCGCGGAACCGACCTAAGCACCCCCGGCGTGGCAAAC
TTGCGCCTAGCATACTTATCCGTGAAGCTCCTGCTCCGACGCATCGCACT
CGACATGGATGACGAGCATACTGAGACTTCCAACTTCGACAATGGGAATG
ATTCTAACTGTTCCTCCTTCTCATTTACACAAGTCGAGCGCGCAGCAGAA
GAGATAGTGCATCTCGTAGGGGAGCTGGACGAGCAGCAGCTACGTGGATT
TTGGGTCCCAGTTCAGGCGTATTCGCTCACGTCTGCGACGACATTCCTTC
TACGGAGTGGGCTGCGCAGGGTTCAATTGCATTCCGCGAATAGTGACAGC
AATCCACCACTAGATTTGGCTAAAGAGATGGTTGCTACACTGCAGTCTCA
TCGGCAGCAGTTTCGATGGGATCTGGGGGATGATTGTTTGGCAAAGTGTG
CTGAGCTGGTAGAGAGGGTTGCTTCTCTAGAGAATGATGGGATGAGCTTG
TCGTTGAATGAGGAATTGTCTGATCCATCTCATATTCTCGATATAGACAC
ATCGATTCTGGATGAGGTGTTTTGGGATATGCCGTGTATGGGGAATACCC
TTAATTTATAAGTTCTTTCAATATGCCAATATATGCTTCCCTGTATTTGA
CGAGGCGTCGTTTATGAATGCCTACTGCACCCGCAAAGAGGAAATATCTC
CAGCTCTCCTCTGCAATCTATATGCCAACTCCCTTATCTACTGGGACAAT
TCACCCAAGTTATGCTTAACTCGCACACCCGACATTCGCTATATCTGGAA
TCAAGCTAACGAGGCCCTTCATTCCGAACTTTTCTTGTGCCCTGGTATAT
CAACTGTACTGGCGATGCTGCTAAACGTCTGCGGTAGACCAAGCACCTCG
ATCTTTGGTAATGGGGGTATGGTAGGGACGGCGGTAGCCTTATCCAACGC
CTTGGGCTTGAATCGAGATCCCTGCCACTGGAACATCTCTACTCTTGAGA
AGGGACTTCGCATCCGCATTTGGTGGTTGGTGGTGATTCAAGATCGATGG
AAGCGAACTGTCAATTTGCGGCGAATTGTACCCAAGACAGCTCGAACAGA
GCGGCCCTCCACCCCTCGGGTCGTACTCCCATCACCCAGGACCAACAAAG
CTTCCGACACACCACAACTTACGGGACACCACCAGCCAGCTCAGCCTTCC
ACAGCATATTCAGACGGCAAAGTTGCAAGTCTGATGGACGTGGTCGGCGA
TACCGGGGACGACAGCTCTCATGTCGTCAGCCCAGTCGTTGCTGACGACA
GTAGTATACTAGAAGAATATCTGTTCACCGTTCCAGATAATCGAAGGCTT
TGCTTGATGCACACCAATTCAAAACCCAGTCGACTTATGCGGCAGGTACT
GTTCAATACCATTCCGAGGCGTCCATTGGGGGTGTACTCCGGTCAATCTC
TCCCATCTATGAAGTGCGAGCTCATCGAAAAGTACCTCGAGCCTACGGCA
AAGGATGTTGTGAGCCTATGTCTACCTTGTCGGAAACGCAAGTCGCGATG
CCGCACGAGAGATTCCTCCGCTACGTGTGCAGCCTCGCCTACGGAACACC
GCTTCAGGTTCATCGAGCCCAATACGACGTTCCGTTTCCGACCATGGAGT
ATCTTTGTTCTTCTTCCGCAATGCTATCCCAAGAAGCCGCAGCTTCAATC
TTCATCGCCTTCACAACGTTAACAGAAGTGTTGGGTCAATACCTTGAATA
CATCTATCACGTTTCCAGCCCCGTCAGAAAGACGATCACTTCGCTCTCAC
ACCTGCTCACTAACTGGGAAGACTCCCTCGACATCAACACCCGCCACATA
ATCCTCCGCGGAACCGACCTAAGCACCCCCGGCGTGGCAAACTTGCGCCT
AGCATACTTATCCGTGAAGCTCCTGCTCCGACGCATCGCACTCGACATGG
ATGACGAGCATACTGAGACTTCCAACTTCGACAATGGGAATGATTCTAAC
TGTTCCTCCTTCTCATTTACACAAGTCGAGCGCGCAGCAGAAGAGATAGT
GCATCTCGTAGGGGAGCTGGACGAGCAGCAGCTACGTGGATTTTGGGTCC
CAGTTCAGGCGTATTCGCTCACGTCTGCGACGACATTCCTTCTACGGAGT
GGGCTGCGCAGGGTTCAATTGCATTCCGCGAATAGTGACAGCAATCCACC
ACTAGATTTGGCTAAAGAGATGGTTGCTACACTGCAGTCTCATCGGCAGC
AGTTTCGATGGGATCTGGGGGATGATTGTTTGGCAAAGTGTGCTGAGCTG
GTAGAGAGGGTTGCTTCTCTAGAGAATGATGGGATGAGCTTGTCGTTGAA
TGAGGAATTGTCTGATCCATCTCATATTCTCGATATAGACACATCGATTC
TGGATGAGGTGTTTTGGGATATGCCGTGTATGGGGAATACCCTTAATTTA
TAAGTTCTTTCAATATGCCAATATATGCTTCCCTGTATTTGACGAGGCGT
CGTTTATGAATGCCTACTGCACCCGCAAAGAGGAAATATCTCCAGCTCTC
CTCTGCAATCTATATGCCAACTCCCTTATCTACTGGGACAATTCACCCAA
GTTATGCTTAACTCGCACACCCGACATTCGCTATATCTGGAATCAAGCTA
ACGAGGCCCTTCATTCCGAACTTTTCTTGTGCCCTGGTATATCAACTGTA
CTGGCGATGCTGCTAAACGTCTGCGGTAGACCAAGCACCTCGATCTTTGG
TAATGGGGGTATGGTAGGGACGGCGGTAGCCTTATCCAACGCCTTGGGCT
TGAATCGAGATCCCTGCCACTGGAACATCTCTACTCTTGAGAAGGGACTT
CGCATCCGCATTTGGTGGTTGGTGGTGATTCAAGATCGATGGAAGCGAAC
TGTCAATTTGCGGCGAATTGTACCCAAGACAGCTCGAACAGAGCGGCCCT
CCACCCCTCGGGTCGTACTCCCATCACCCAGGACCAACAAAGCTTCCGAC
ACACCACAACTTACGGGACACCACCAGCCAGCTCAGCCTTCCACAGCATA
TTCAGACGGCAAAGTTGCAAGTCTGATGGACGTGGTCGGCGATACCGGGG
ACGACAGCTCTCATGTCGTCAGCCCAGTCGTTGCTGACGACAGTAGTATA
CTAGAAGAATATCTGTTCACCGTTCCAGATAATCGAAGGCTTTGCTTGAT
GCACACCAATTCAAAACCCAGTCGACTTATGCGGCAGGTACTGTTCAATA
CCATTCCGAGGCGTCCATTGGGGGTGTACTCCGGTCAATCTCTCCCATCT
ATGAAGTGCGAGCTCATCGAAAAGTACCTCGAGCCTACGGCAAAGGATGT
TGTGAGCCTATGTCTACCTTGTCGGAAACGCAAGTCGCGATGCCGCACGA
GAGATTCCTCCGCTACGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000499-T1.utr3p1 | KJC3_000499-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000499-T1.utr5p1 | KJC3_000499-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1035052..1037247 - |
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