|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1109517..1112397+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000530-T2 ID=KJC3_000530-T2|Name=KJC3_000530-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2881bp|location=Sequence derived from alignment at ch1:1109517..1112397+ (Aspergillus niger KJC3)
GGTTGGTAGTGCTGGTTGTCGTGAGACTGAAAAAGCCGGGCGGCGCTCGG
TTGGGCCACGCCTCAACTGAGCTACGCCTCTTCCGACCTAGCGCCAGACA
CATGATCGCGGTGCTTGGATTGGCTGGGCGGGAGCTTATGTCATCCCCTC
ATCAATCGCGGGAGCTTCTCAGGATGCCAGGTGGAGAGTGTGTAGTTACA
GACTGATGAGTGGGTAATTCCTCTCTATCATATTATCTATCGCCAGCGGA
GTTCAGAGCCCGTCTTTCTTCACCATTGCTGCTTTTCCCCCCCGGAATTC
ACTATTGCGTCGCTTGATCTCTCTGCCACGGTCCCCTCACCACATGTCAT
GAATCTTGGCCATTCCAGGTAATCGTGATAACCATCCGGGGTGAAGCAAG
TCCAGCTTAAATCGAACTACTATGGCCTCGCAACCAACGTCTTTGAGGGA
CCGTCAGGTCGGTAGGTTTCTGCTGTCCGTATCGGATTCGTGTAGATATT
CACAGCTTTCTAACTCGATCACAGCCTCCATCCACAAGATTCTCAACTTG
AATCATGAACCGCAACCCGCGGAAGACGCCCACCACGATGCGTCCGCGCA
GGGCCTCATTTCTACCCCGGTACTGAACGAGGATGGCGATCCTATCTGGA
AGGTCCTGGTGTTTGATAATATGGGAAGAGATGTCATCAGCAGCGTGCTG
CGTGTCAATGACCTCAGAGCTTGGGGAGTCACAATCCATCTGTACGGACC
CTGGTCCAGGCCCCCTAAATCGATCGCTGTGCGTGCGTGACGTAGCTAAT
GACCTCCGCCAGAAACATCAATTCCACACGATACCCGATTCCCGACGTCC
CTGTTGTATACCTTGTCGAACCTACGCCTTCGAACGTCGAAGCGATCACA
AATGACCTTTCTCGCGGTCTTTACTCTCCCGCCTACGTCAACTTCCTCTC
CTCCGTACCCAGACCCCTCCTCGAAGACTTTGCGTCTCAGATAGCAACAA
CCGGCACCGCAGAGCATGTCGCACAAGTTTACGACCAGTACTTGAATTTT
ATTGTGGCCGAACCGGACCTTTTCAGCTTGGGGCTAGGAAACGATGCATA
CTGGAAGATTAACAGTGCGCAAACCAGCGACGATGATCTGGACGCCATTG
TGGATAGGATTGTAAGCGGGTTGTTTAGCGTCAGCGTCACAATGGGTAGG
TCAGCCGATATGGTCCTTGTACTTTTAACTGACGAGTTGAATACAACAGG
TGCCATCCCGATCATTCGGTGCCCTAAGGGCGGCGCGGCAGAATTAATAG
CAACCAAGCTGGACCGCAAGCTACGCGATCACATCCTTAACTCGAAAGAC
AATCTGTTTTCAAACAAGAAGAACACTCCGGGAGTTCCCTCATCGCGACC
TGTTTTGATCATCGTCGATCGCAACGTGGATTTGGTGCCTATGCTATCCC
ACTCGTGGACATACCAGTCTCTAGTGCAGGACGTTCTACAGATGCGCCTC
AATCGGATTACCGTTGAGTCAACTGATGAAGCAAACCCCGCCAAGGGCGT
CGCAAAGAGAGCATACGACTTAAATAGCAATGACTTTTTCTGGAAGCGCA
ATGCCGGCGCGCCATTCCCTCAGGTTGCGGAAGACATCGATGCGGAGCTT
ACACGTTACAAGGAGGACGCCACTGAGATCACAAAGAAGACCGGTGCTTC
CTCAATTGAAGATCTCCAGAACGACACCAGCGCCTCTGCACAGCACCTCA
AGGCTGCCATCACCCTCCTCCCCGAACTACGGGAACGCAAGGCGATTCTT
GACATGCACATGAACATTGCGACCGCCCTGCTCAAGGGAATCAAAGACCG
TCAGCTGGATAACTTCTTTGAACTGGAAGAAAATATCACCAAGCAAACAA
AGGCCCAGATCATGGAACTCATCAACGACTCCAGTAAAGGCAACGAACCC
CTGGACAAGCTCCGTCTTTTCATCATCTGGTTCCTGAGCACTGAAACAGA
GGTTTCCCGCTCTGAGATGACACAATTCGAAGAGGCTCTCACCCGCATCG
GCGTCACGGACGTGACCCCCATCGCCTATGTCAGACAGGTCCGAGAAATA
ACCCGCATGACCATGATGACTACCGCAACAGGCGCTCCCCAACAACAGTC
CTCTAATCTCTTCCGCGGGTTCTCCTCTCTCTCTAACCAACTGACTGACC
GCATCACCTCCGGAGCCCTCGGCGCCAACTTCGATTCCCTCATTTCCGGC
GTCAAGAATTTTCTCCCTGCCAACAAGGACCTGACCCTGACCAAGATCAC
CGAATCCATCATGGACCCAACCTCCGCATCCAGCTCCGCTATCGCCAAGA
CAGAAAGCTATCTCTACTTCGACCCCCGCAGCGCCAACGCCCGAGGCGCC
ATGCCTCCGGCCTCGGCTTCGCGCAACGCCCAAGGGCAGAGCCTGAACAG
CTCCGGGCCCGGCATGAGTGCCACCTTCGGCCAACGCCGACAGGCCTTCA
ACGAAGCGATCGTCTTCACCGTCGGTGGAGGCAGCATGGACGAATACGGC
AACTTGCAGGACTGGGTAAGCCGGACAAGCGGACAACCAGGCGCTGACGG
TGCCGGGGCCGCCAACCGTGGGGTGCATGGGGCGCCGAAGCGGAGGGTTG
TCTATGGTAGTACGGATTTGATGAACGCCAGAGACTTCCTTACAGAATCA
TTGGCAAAATTGGGCAGAGAGGGTTGAGCATATGTTGATGCAGCCGGGCG
GTATTGTGAGAGCGGTCGCAAATAGAATTTGCCTTCAACGTATAGTACTT
AGTATAGCTAATTGATACGCTTATGGAGATGATCACTGCCTACGTCGAAA
CCCACCACAAACAATACATAGCATAAGCAAG back to topCoding sequence (CDS) from alignment at ch1:1109517..1112397+ >KJC3_000530-T2 ID=KJC3_000530-T2|Name=KJC3_000530-T2|organism=Aspergillus niger KJC3|type=CDS|length=5796bp|location=Sequence derived from alignment at ch1:1109517..1112397+ (Aspergillus niger KJC3)
ATGGGAAGAGATGTCATCAGCAGCGTGCTGCGTGTCAATGACCTCAGAGC
TTGGGGAGTCACAATCCATCTAAACATCAATTCCACACGATACCCGATTC
CCGACGTCCCTGTTGTATACCTTGTCGAACCTACGCCTTCGAACGTCGAA
GCGATCACAAATGACCTTTCTCGCGGTCTTTACTCTCCCGCCTACGTCAA
CTTCCTCTCCTCCGTACCCAGACCCCTCCTCGAAGACTTTGCGTCTCAGA
TAGCAACAACCGGCACCGCAGAGCATGTCGCACAAGTTTACGACCAGTAC
TTGAATTTTATTGTGGCCGAACCGGACCTTTTCAGCTTGGGGCTAGGAAA
CGATGCATACTGGAAGATTAACAGTGCGCAAACCAGCGACGATGATCTGG
ACGCCATTGTGGATAGGATTGTAAGCGGGTTGTTTAGCGTCAGCGTCACA
ATGGGTGCCATCCCGATCATTCGGTGCCCTAAGGGCGGCGCGGCAGAATT
AATAGCAACCAAGCTGGACCGCAAGCTACGCGATCACATCCTTAACTCGA
AAGACAATCTGTTTTCAAACAAGAAGAACACTCCGGGAGTTCCCTCATCG
CGACCTGTTTTGATCATCGTCGATCGCAACGTGGATTTGGTGCCTATGCT
ATCCCACTCGTGGACATACCAGTCTCTAGTGCAGGACGTTCTACAGATGC
GCCTCAATCGGATTACCGTTGAGTCAACTGATGAAGCAAACCCCGCCAAG
GGCGTCGCAAAGAGAGCATACGACTTAAATAGCAATGACTTTTTCTGGAA
GCGCAATGCCGGCGCGCCATTCCCTCAGGTTGCGGAAGACATCGATGCGG
AGCTTACACGTTACAAGGAGGACGCCACTGAGATCACAAAGAAGACCGGT
GCTTCCTCAATTGAAGATCTCCAGAACGACACCAGCGCCTCTGCACAGCA
CCTCAAGGCTGCCATCACCCTCCTCCCCGAACTACGGGAACGCAAGGCGA
TTCTTGACATGCACATGAACATTGCGACCGCCCTGCTCAAGGGAATCAAA
GACCGTCAGCTGGATAACTTCTTTGAACTGGAAGAAAATATCACCAAGCA
AACAAAGGCCCAGATCATGGAACTCATCAACGACTCCAGTAAAGGCAACG
AACCCCTGGACAAGCTCCGTCTTTTCATCATCTGGTTCCTGAGCACTGAA
ACAGAGGTTTCCCGCTCTGAGATGACACAATTCGAAGAGGCTCTCACCCG
CATCGGCGTCACGGACGTGACCCCCATCGCCTATGTCAGACAGGTCCGAG
AAATAACCCGCATGACCATGATGACTACCGCAACAGGCGCTCCCCAACAA
CAGTCCTCTAATCTCTTCCGCGGGTTCTCCTCTCTCTCTAACCAACTGAC
TGACCGCATCACCTCCGGAGCCCTCGGCGCCAACTTCGATTCCCTCATTT
CCGGCGTCAAGAATTTTCTCCCTGCCAACAAGGACCTGACCCTGACCAAG
ATCACCGAATCCATCATGGACCCAACCTCCGCATCCAGCTCCGCTATCGC
CAAGACAGAAAGCTATCTCTACTTCGACCCCCGCAGCGCCAACGCCCGAG
GCGCCATGCCTCCGGCCTCGGCTTCGCGCAACGCCCAAGGGCAGAGCCTG
AACAGCTCCGGGCCCGGCATGAGTGCCACCTTCGGCCAACGCCGACAGGC
CTTCAACGAAGCGATCGTCTTCACCGTCGGTGGAGGCAGCATGGACGAAT
ACGGCAACTTGCAGGACTGGGTAAGCCGGACAAGCGGACAACCAGGCGCT
GACGGTGCCGGGGCCGCCAACCGTGGGGTGCATGGGGCGCCGAAGCGGAG
GGTTGTCTATGGTAGTACGGATTTGATGAACGCCAGAGACTTCCTTACAG
AATCATTGGCAAAATTGGGCAGAGAGGGTTGAATGGGAAGAGATGTCATC
AGCAGCGTGCTGCGTGTCAATGACCTCAGAGCTTGGGGAGTCACAATCCA
TCTAAACATCAATTCCACACGATACCCGATTCCCGACGTCCCTGTTGTAT
ACCTTGTCGAACCTACGCCTTCGAACGTCGAAGCGATCACAAATGACCTT
TCTCGCGGTCTTTACTCTCCCGCCTACGTCAACTTCCTCTCCTCCGTACC
CAGACCCCTCCTCGAAGACTTTGCGTCTCAGATAGCAACAACCGGCACCG
CAGAGCATGTCGCACAAGTTTACGACCAGTACTTGAATTTTATTGTGGCC
GAACCGGACCTTTTCAGCTTGGGGCTAGGAAACGATGCATACTGGAAGAT
TAACAGTGCGCAAACCAGCGACGATGATCTGGACGCCATTGTGGATAGGA
TTGTAAGCGGGTTGTTTAGCGTCAGCGTCACAATGGGTGCCATCCCGATC
ATTCGGTGCCCTAAGGGCGGCGCGGCAGAATTAATAGCAACCAAGCTGGA
CCGCAAGCTACGCGATCACATCCTTAACTCGAAAGACAATCTGTTTTCAA
ACAAGAAGAACACTCCGGGAGTTCCCTCATCGCGACCTGTTTTGATCATC
GTCGATCGCAACGTGGATTTGGTGCCTATGCTATCCCACTCGTGGACATA
CCAGTCTCTAGTGCAGGACGTTCTACAGATGCGCCTCAATCGGATTACCG
TTGAGTCAACTGATGAAGCAAACCCCGCCAAGGGCGTCGCAAAGAGAGCA
TACGACTTAAATAGCAATGACTTTTTCTGGAAGCGCAATGCCGGCGCGCC
ATTCCCTCAGGTTGCGGAAGACATCGATGCGGAGCTTACACGTTACAAGG
AGGACGCCACTGAGATCACAAAGAAGACCGGTGCTTCCTCAATTGAAGAT
CTCCAGAACGACACCAGCGCCTCTGCACAGCACCTCAAGGCTGCCATCAC
CCTCCTCCCCGAACTACGGGAACGCAAGGCGATTCTTGACATGCACATGA
ACATTGCGACCGCCCTGCTCAAGGGAATCAAAGACCGTCAGCTGGATAAC
TTCTTTGAACTGGAAGAAAATATCACCAAGCAAACAAAGGCCCAGATCAT
GGAACTCATCAACGACTCCAGTAAAGGCAACGAACCCCTGGACAAGCTCC
GTCTTTTCATCATCTGGTTCCTGAGCACTGAAACAGAGGTTTCCCGCTCT
GAGATGACACAATTCGAAGAGGCTCTCACCCGCATCGGCGTCACGGACGT
GACCCCCATCGCCTATGTCAGACAGGTCCGAGAAATAACCCGCATGACCA
TGATGACTACCGCAACAGGCGCTCCCCAACAACAGTCCTCTAATCTCTTC
CGCGGGTTCTCCTCTCTCTCTAACCAACTGACTGACCGCATCACCTCCGG
AGCCCTCGGCGCCAACTTCGATTCCCTCATTTCCGGCGTCAAGAATTTTC
TCCCTGCCAACAAGGACCTGACCCTGACCAAGATCACCGAATCCATCATG
GACCCAACCTCCGCATCCAGCTCCGCTATCGCCAAGACAGAAAGCTATCT
CTACTTCGACCCCCGCAGCGCCAACGCCCGAGGCGCCATGCCTCCGGCCT
CGGCTTCGCGCAACGCCCAAGGGCAGAGCCTGAACAGCTCCGGGCCCGGC
ATGAGTGCCACCTTCGGCCAACGCCGACAGGCCTTCAACGAAGCGATCGT
CTTCACCGTCGGTGGAGGCAGCATGGACGAATACGGCAACTTGCAGGACT
GGGTAAGCCGGACAAGCGGACAACCAGGCGCTGACGGTGCCGGGGCCGCC
AACCGTGGGGTGCATGGGGCGCCGAAGCGGAGGGTTGTCTATGGTAGTAC
GGATTTGATGAACGCCAGAGACTTCCTTACAGAATCATTGGCAAAATTGG
GCAGAGAGGGTTGAATGGGAAGAGATGTCATCAGCAGCGTGCTGCGTGTC
AATGACCTCAGAGCTTGGGGAGTCACAATCCATCTAAACATCAATTCCAC
ACGATACCCGATTCCCGACGTCCCTGTTGTATACCTTGTCGAACCTACGC
CTTCGAACGTCGAAGCGATCACAAATGACCTTTCTCGCGGTCTTTACTCT
CCCGCCTACGTCAACTTCCTCTCCTCCGTACCCAGACCCCTCCTCGAAGA
CTTTGCGTCTCAGATAGCAACAACCGGCACCGCAGAGCATGTCGCACAAG
TTTACGACCAGTACTTGAATTTTATTGTGGCCGAACCGGACCTTTTCAGC
TTGGGGCTAGGAAACGATGCATACTGGAAGATTAACAGTGCGCAAACCAG
CGACGATGATCTGGACGCCATTGTGGATAGGATTGTAAGCGGGTTGTTTA
GCGTCAGCGTCACAATGGGTGCCATCCCGATCATTCGGTGCCCTAAGGGC
GGCGCGGCAGAATTAATAGCAACCAAGCTGGACCGCAAGCTACGCGATCA
CATCCTTAACTCGAAAGACAATCTGTTTTCAAACAAGAAGAACACTCCGG
GAGTTCCCTCATCGCGACCTGTTTTGATCATCGTCGATCGCAACGTGGAT
TTGGTGCCTATGCTATCCCACTCGTGGACATACCAGTCTCTAGTGCAGGA
CGTTCTACAGATGCGCCTCAATCGGATTACCGTTGAGTCAACTGATGAAG
CAAACCCCGCCAAGGGCGTCGCAAAGAGAGCATACGACTTAAATAGCAAT
GACTTTTTCTGGAAGCGCAATGCCGGCGCGCCATTCCCTCAGGTTGCGGA
AGACATCGATGCGGAGCTTACACGTTACAAGGAGGACGCCACTGAGATCA
CAAAGAAGACCGGTGCTTCCTCAATTGAAGATCTCCAGAACGACACCAGC
GCCTCTGCACAGCACCTCAAGGCTGCCATCACCCTCCTCCCCGAACTACG
GGAACGCAAGGCGATTCTTGACATGCACATGAACATTGCGACCGCCCTGC
TCAAGGGAATCAAAGACCGTCAGCTGGATAACTTCTTTGAACTGGAAGAA
AATATCACCAAGCAAACAAAGGCCCAGATCATGGAACTCATCAACGACTC
CAGTAAAGGCAACGAACCCCTGGACAAGCTCCGTCTTTTCATCATCTGGT
TCCTGAGCACTGAAACAGAGGTTTCCCGCTCTGAGATGACACAATTCGAA
GAGGCTCTCACCCGCATCGGCGTCACGGACGTGACCCCCATCGCCTATGT
CAGACAGGTCCGAGAAATAACCCGCATGACCATGATGACTACCGCAACAG
GCGCTCCCCAACAACAGTCCTCTAATCTCTTCCGCGGGTTCTCCTCTCTC
TCTAACCAACTGACTGACCGCATCACCTCCGGAGCCCTCGGCGCCAACTT
CGATTCCCTCATTTCCGGCGTCAAGAATTTTCTCCCTGCCAACAAGGACC
TGACCCTGACCAAGATCACCGAATCCATCATGGACCCAACCTCCGCATCC
AGCTCCGCTATCGCCAAGACAGAAAGCTATCTCTACTTCGACCCCCGCAG
CGCCAACGCCCGAGGCGCCATGCCTCCGGCCTCGGCTTCGCGCAACGCCC
AAGGGCAGAGCCTGAACAGCTCCGGGCCCGGCATGAGTGCCACCTTCGGC
CAACGCCGACAGGCCTTCAACGAAGCGATCGTCTTCACCGTCGGTGGAGG
CAGCATGGACGAATACGGCAACTTGCAGGACTGGGTAAGCCGGACAAGCG
GACAACCAGGCGCTGACGGTGCCGGGGCCGCCAACCGTGGGGTGCATGGG
GCGCCGAAGCGGAGGGTTGTCTATGGTAGTACGGATTTGATGAACGCCAG
AGACTTCCTTACAGAATCATTGGCAAAATTGGGCAGAGAGGGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016192 | vesicle-mediated transport |
| GO:0006904 | vesicle docking involved in exocytosis |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000530-T2.utr3p1 | KJC3_000530-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092619MJ |
| DBxref | InterPro:IPR036045 |
| DBxref | InterPro:IPR043154 |
| DBxref | InterPro:IPR043127 |
| DBxref | InterPro:IPR027482 |
| DBxref | InterPro:IPR001619 |
| DBxref | PFAM:PF00995 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1109517..1112397 + |
|
