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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1174366..1178164- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000555-T1 ID=KJC3_000555-T1|Name=KJC3_000555-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3799bp|location=Sequence derived from alignment at ch1:1174366..1178164- (Aspergillus niger KJC3)
CTCAAAGAAGAAATCCGACTTTGCCCACTCTTGATACCCAACGACCCGAG
ATACCCCCCTTTTTACCTTCCATCGCTCTTCTATTCTTACTCCACACACA
TACTCTCACACACATTCGCACTTCCAAAATACACCCATTACCCCTCCATA
CTACTTTGTGCTAGATTTGTCACAGTCAAATCAGCTTACTTGCCTACTAC
TATCCCATTTCCACTTGCTCTCAAGGCTTGACTACTTGCTTGACTCTTTT
GTTCTTTCTCTGTTCCTACAAGTGTCCAACCCGTGGATCTTGGAAAAGAA
AAGAAACTACTTGCCTTCCCCACCTGGCTAGATCAACCCTTGAACTGCCC
TTCTGGAAACCCAGTCCGTATCCTGGATAGGATTTGCTTGCTTTGTTTTG
TTTTTCGCTCCTCCCAGGCTTTAGTCTGAGTATACGGCAACACAATAACA
GGTAGTCCCCTCATCAATCTCCTTTCGTCTGTTTGCTTTGATTTTTCTGC
TTTTCGTTTTTTCCCTTTCTGCGATTGTTTGCATTTCGAAACTCGTGGAA
CCTACTTCTCGACCACACCATTCAACGACAAACAGCACTATAGAGGACCC
CTGGACTCTTGAATCTCTTTGCTTCCGCTGGATTCTTCCGTCGAAGCGAC
GGATTGACGAAAAACATGTTACCGTGGAATTCATTTGCTCGTCCACAGCA
GCCGCTGTGTGACTGGACACTCTTGAGTGTTGTTTAATGTTGCACACTCA
ATTCTCGATTACCCCTGGACTATCCTTTCTGCCTGGAACCACCCGGATCT
CTCCTCACTAAGCCTAGTGGGAGATTGGACATTTGCCTTGGACCCCCTTT
TTGTTGGCCTATTTTCTCCGTTCCCCGATTTGGACTCCCGTTCTGGATTT
AGAAGCCGTCTTTGGAAATAGCAATGACACAATGAACTCCGACCTTGGAT
TTTTCGATCAAATCATCGCTGGACCTCGACATCTAATGGACTGAACCATT
GATCAACTTATGTGTTGCATCTTTCACTTGAAGCCTTTGTAGTCTGGACC
CCTGGATGGATACCTTAACCCAAAACTAGACGACCCGATCGACTGCAGCT
GCAGCTTTTGACACTGGAAACAAGCACCACGGACATGTTGCCGCTCTTGC
CGATCGCTTTACTGGTCATTGCCTCAGATTTGTTCCTGGATTAACAACAG
CGCGCACCCCTTCTCTTGGACCGAGCGGTAACCTCCCTGGAGTGATATAC
ACACGACACCTTATTGGTTGGTGTGCCTCGACCTTGAAGCTTGCATGAAT
GATTTTCTGACTGATTATAGGCCCTTTGCTCGACATGGATCCCAGATGCA
GACCATCGTTCACTTTCTTGTCATTGTTGCAATAGCATTTAGGTGTAGAT
GTACTGACTTTTAGTTCCTTTCTAGTGCTTGCCTTTTGTCTTCCAGCTTG
TCTGGTCATAGAACACACACCCCACACACAATGTCCACCAAGATCAAGAA
CGACCCAGAGAACATGTCTTTGTCCCAGTCATCTTTGCACACTATGGACC
ACTTGTCTCAGCCGAGACAAAACCAAATGATCCCGGGGATCCCCAACATG
GCCTCCAGAGGAATCCAGGATGATGAACTTTCGAGCCAGGACAATTTCTC
CTTGTGTTCAAGCACACACCCCAACCACGGAACCCCCAATGACTTAAAGG
GGTGGTCTCTGAGCGACGTGGATGCACTTGACAGTGGTGCGATGTCCAAA
CCAGAGTCCCCGGAAGTTCAGATGCTCTCTTTCTCTTTCTCTCAGCAACT
GCTGCCATCGACCGTTGGCCCCAGTGATGTAATGTATCATCACGCCGGAT
CCGATTTCTCAGGCATCCAGGATGTGACTGAACAAAATGACCTGGATTTC
TCCCATGCACATGACTTCAACCACTACTCCTCATTGGTTGACCTCTCTGC
CTTTGATAATGAAGTTTATGGCCAGAATGGTACCCAGTCCTCTTGCACTC
CTGATGATACTCTCTCCAGCCACAGCTCTCATGCGGATGACGGCCACCTG
GCCGGCAATGAGGCGTGGAACTCGATGAACTACCACGGATCATCCATGGA
TCAGTATACCACCGGCATGTTCCAATCAGTGCCTGTTTCTCCTCCCTTGT
CTGACGCCAGTAATGATGTTTCTGTTACTTCCTCTTGCTCTGCTTCTGGA
TACCCCACCTTCATGAGCCATGAAGATGCTATGCTCAAAGATGTTACAAC
CACTCCCGTTGGAAGCCATGGAATCAACCTAGGAGACCCATTGTTCCCCC
TCACTCCCCCCTTGAGTGAACAGGACCCCAACAGGTTAGTATTCCTCCAT
CGCACCTGCAGCCTCGAACAGTGAATCTGACTTGATTAGAACCATTCGGG
CTACTAAGAATGCACGTAGGCCAGCCCTGCAGACTTCCATGTCCCAGACC
CAGGTCAAGCAGGATCCTGAATTCTTCCCACCCCTGCCGGTCAAGGAAAC
GCTCCGCCAAAAGGCCAAGGAGGGCTCTGATCTTCGGAACCCCCGGGATC
ACCCTTACTACTCCCTGCCTACTCACAATGATGGAAAGTACTACTGCCCC
TTCGCCAACGGAGAGAAGCCCTGCAACCACCCCCCGACTACCCAGAAGTG
CGCCTATCAGTGAGTCAAACCCCAACCCTCCTATGATGGACTCAAACTAA
TCGTGGAACAGCAAATACTTGGACTCCCACTTGAAGCCATACCGCTGCAA
GGTGGCCGCCTGCATGGATGCTCAGCTGCAGTTCTCTTCGAACGCATGCC
TTTTCCGCCACGAGCGCGAAGCCCATGGATTCCACGGTCACGGAGACAAC
CCCCACCTGTGCCTGTTTGAGGGTTGTGACAGGTCGGTTCCTGGTTACGG
ATTCCCCCGCAGATGGAATCTGTTCGACCACATGCGACGTGTGCACGACT
TTGCCTCTTCTGACAGGCACAGCTCCCCGGATGCTTCCCCCACTACTGGA
CCGGCCAAGAAGAAGGAGACGGGCGGACGCAAGCGCAGAGTTGCTGGTGT
CACTGGAGCCCCCACCATGAAGCGCACTCGTTCCACCCAGTCCCAGACCA
ACCCTCTCAAGGCTGCCCAGCAGACTTCTGCTCATCACAACCAGAGACTC
CAGAATGCGGAGAGAAACTACTACAACTGCCGGTCCCGGCTGCTCGAGGA
ACTCACCAACATCACGCCCCAGGATTCTTCCATGCATGAGAAGGTCAATG
CCAGCCTTCAGGAGCTCATTACACTTGGACTTAACTACCGCCACATTGAA
GCCAGCCAGGCTGCGGCCCAGATCGCTCACGGCCTTCCTGCTTGAATGCT
TCACCGAGACGATCATGTGAAGTCCTTTTTTTAAAATTTATCTCCCCAGG
GATCGCCGAGTGCTTGATAGCCCTCATAGGAAGGATCTTATGGTAACGGG
AAAGAGCCGTGATGGATCGAAGTTTCATGGAAAGCGTCCGTGAAAGACTA
TTCTCTCACCACCGGTTGGATTTCTTATTTCATTCCAAAGGATCCCCTGG
CCTCCTGCGGCTGCCCGGAGAGCTCCCCTCTCCAGCCACAATGCGTCCAC
GACGCATTACGCGGCTTCACCCTCGGTGATGCGGACTTGATCCCATCATC
TGGAGGGGCATCTTCCAGACCATTACCGGACTCACTACGGTGTAGGCTGG
TGTGGTGGAAGCATTGATTGGGGACGACAGCTCTGGGCGGTCGGATAGGA
GATGCCTCCTCCTTTCTTCATCATTGTCTTGCGACAGTTTACACTTCAT back to topCoding sequence (CDS) from alignment at ch1:1174366..1178164- >KJC3_000555-T1 ID=KJC3_000555-T1|Name=KJC3_000555-T1|organism=Aspergillus niger KJC3|type=CDS|length=5274bp|location=Sequence derived from alignment at ch1:1174366..1178164- (Aspergillus niger KJC3)
CAAATACTTGGACTCCCACTTGAAGCCATACCGCTGCAAGGTGGCCGCCT
GCATGGATGCTCAGCTGCAGTTCTCTTCGAACGCATGCCTTTTCCGCCAC
GAGCGCGAAGCCCATGGATTCCACGGTCACGGAGACAACCCCCACCTGTG
CCTGTTTGAGGGTTGTGACAGGTCGGTTCCTGGTTACGGATTCCCCCGCA
GATGGAATCTGTTCGACCACATGCGACGTGTGCACGACTTTGCCTCTTCT
GACAGGCACAGCTCCCCGGATGCTTCCCCCACTACTGGACCGGCCAAGAA
GAAGGAGACGGGCGGACGCAAGCGCAGAGTTGCTGGTGTCACTGGAGCCC
CCACCATGAAGCGCACTCGTTCCACCCAGTCCCAGACCAACCCTCTCAAG
GCTGCCCAGCAGACTTCTGCTCATCACAACCAGAGACTCCAGAATGCGGA
GAGAAACTACTACAACTGCCGGTCCCGGCTGCTCGAGGAACTCACCAACA
TCACGCCCCAGGATTCTTCCATGCATGAGAAGGTCAATGCCAGCCTTCAG
GAGCTCATTACACTTGGACTTAACTACCGCCACATTGAAGCCAGCCAGGC
TGCGGCCCAGATCGCTCACGGCCTTCCTGCTTGAAACCATTCGGGCTACT
AAGAATGCACGTAGGCCAGCCCTGCAGACTTCCATGTCCCAGACCCAGGT
CAAGCAGGATCCTGAATTCTTCCCACCCCTGCCGGTCAAGGAAACGCTCC
GCCAAAAGGCCAAGGAGGGCTCTGATCTTCGGAACCCCCGGGATCACCCT
TACTACTCCCTGCCTACTCACAATGATGGAAAGTACTACTGCCCCTTCGC
CAACGGAGAGAAGCCCTGCAACCACCCCCCGACTACCCAGAAGTGCGCCT
ATCAATGTCCACCAAGATCAAGAACGACCCAGAGAACATGTCTTTGTCCC
AGTCATCTTTGCACACTATGGACCACTTGTCTCAGCCGAGACAAAACCAA
ATGATCCCGGGGATCCCCAACATGGCCTCCAGAGGAATCCAGGATGATGA
ACTTTCGAGCCAGGACAATTTCTCCTTGTGTTCAAGCACACACCCCAACC
ACGGAACCCCCAATGACTTAAAGGGGTGGTCTCTGAGCGACGTGGATGCA
CTTGACAGTGGTGCGATGTCCAAACCAGAGTCCCCGGAAGTTCAGATGCT
CTCTTTCTCTTTCTCTCAGCAACTGCTGCCATCGACCGTTGGCCCCAGTG
ATGTAATGTATCATCACGCCGGATCCGATTTCTCAGGCATCCAGGATGTG
ACTGAACAAAATGACCTGGATTTCTCCCATGCACATGACTTCAACCACTA
CTCCTCATTGGTTGACCTCTCTGCCTTTGATAATGAAGTTTATGGCCAGA
ATGGTACCCAGTCCTCTTGCACTCCTGATGATACTCTCTCCAGCCACAGC
TCTCATGCGGATGACGGCCACCTGGCCGGCAATGAGGCGTGGAACTCGAT
GAACTACCACGGATCATCCATGGATCAGTATACCACCGGCATGTTCCAAT
CAGTGCCTGTTTCTCCTCCCTTGTCTGACGCCAGTAATGATGTTTCTGTT
ACTTCCTCTTGCTCTGCTTCTGGATACCCCACCTTCATGAGCCATGAAGA
TGCTATGCTCAAAGATGTTACAACCACTCCCGTTGGAAGCCATGGAATCA
ACCTAGGAGACCCATTGTTCCCCCTCACTCCCCCCTTGAGTGAACAGGAC
CCCAACAGCAAATACTTGGACTCCCACTTGAAGCCATACCGCTGCAAGGT
GGCCGCCTGCATGGATGCTCAGCTGCAGTTCTCTTCGAACGCATGCCTTT
TCCGCCACGAGCGCGAAGCCCATGGATTCCACGGTCACGGAGACAACCCC
CACCTGTGCCTGTTTGAGGGTTGTGACAGGTCGGTTCCTGGTTACGGATT
CCCCCGCAGATGGAATCTGTTCGACCACATGCGACGTGTGCACGACTTTG
CCTCTTCTGACAGGCACAGCTCCCCGGATGCTTCCCCCACTACTGGACCG
GCCAAGAAGAAGGAGACGGGCGGACGCAAGCGCAGAGTTGCTGGTGTCAC
TGGAGCCCCCACCATGAAGCGCACTCGTTCCACCCAGTCCCAGACCAACC
CTCTCAAGGCTGCCCAGCAGACTTCTGCTCATCACAACCAGAGACTCCAG
AATGCGGAGAGAAACTACTACAACTGCCGGTCCCGGCTGCTCGAGGAACT
CACCAACATCACGCCCCAGGATTCTTCCATGCATGAGAAGGTCAATGCCA
GCCTTCAGGAGCTCATTACACTTGGACTTAACTACCGCCACATTGAAGCC
AGCCAGGCTGCGGCCCAGATCGCTCACGGCCTTCCTGCTTGAAACCATTC
GGGCTACTAAGAATGCACGTAGGCCAGCCCTGCAGACTTCCATGTCCCAG
ACCCAGGTCAAGCAGGATCCTGAATTCTTCCCACCCCTGCCGGTCAAGGA
AACGCTCCGCCAAAAGGCCAAGGAGGGCTCTGATCTTCGGAACCCCCGGG
ATCACCCTTACTACTCCCTGCCTACTCACAATGATGGAAAGTACTACTGC
CCCTTCGCCAACGGAGAGAAGCCCTGCAACCACCCCCCGACTACCCAGAA
GTGCGCCTATCAATGTCCACCAAGATCAAGAACGACCCAGAGAACATGTC
TTTGTCCCAGTCATCTTTGCACACTATGGACCACTTGTCTCAGCCGAGAC
AAAACCAAATGATCCCGGGGATCCCCAACATGGCCTCCAGAGGAATCCAG
GATGATGAACTTTCGAGCCAGGACAATTTCTCCTTGTGTTCAAGCACACA
CCCCAACCACGGAACCCCCAATGACTTAAAGGGGTGGTCTCTGAGCGACG
TGGATGCACTTGACAGTGGTGCGATGTCCAAACCAGAGTCCCCGGAAGTT
CAGATGCTCTCTTTCTCTTTCTCTCAGCAACTGCTGCCATCGACCGTTGG
CCCCAGTGATGTAATGTATCATCACGCCGGATCCGATTTCTCAGGCATCC
AGGATGTGACTGAACAAAATGACCTGGATTTCTCCCATGCACATGACTTC
AACCACTACTCCTCATTGGTTGACCTCTCTGCCTTTGATAATGAAGTTTA
TGGCCAGAATGGTACCCAGTCCTCTTGCACTCCTGATGATACTCTCTCCA
GCCACAGCTCTCATGCGGATGACGGCCACCTGGCCGGCAATGAGGCGTGG
AACTCGATGAACTACCACGGATCATCCATGGATCAGTATACCACCGGCAT
GTTCCAATCAGTGCCTGTTTCTCCTCCCTTGTCTGACGCCAGTAATGATG
TTTCTGTTACTTCCTCTTGCTCTGCTTCTGGATACCCCACCTTCATGAGC
CATGAAGATGCTATGCTCAAAGATGTTACAACCACTCCCGTTGGAAGCCA
TGGAATCAACCTAGGAGACCCATTGTTCCCCCTCACTCCCCCCTTGAGTG
AACAGGACCCCAACAGCAAATACTTGGACTCCCACTTGAAGCCATACCGC
TGCAAGGTGGCCGCCTGCATGGATGCTCAGCTGCAGTTCTCTTCGAACGC
ATGCCTTTTCCGCCACGAGCGCGAAGCCCATGGATTCCACGGTCACGGAG
ACAACCCCCACCTGTGCCTGTTTGAGGGTTGTGACAGGTCGGTTCCTGGT
TACGGATTCCCCCGCAGATGGAATCTGTTCGACCACATGCGACGTGTGCA
CGACTTTGCCTCTTCTGACAGGCACAGCTCCCCGGATGCTTCCCCCACTA
CTGGACCGGCCAAGAAGAAGGAGACGGGCGGACGCAAGCGCAGAGTTGCT
GGTGTCACTGGAGCCCCCACCATGAAGCGCACTCGTTCCACCCAGTCCCA
GACCAACCCTCTCAAGGCTGCCCAGCAGACTTCTGCTCATCACAACCAGA
GACTCCAGAATGCGGAGAGAAACTACTACAACTGCCGGTCCCGGCTGCTC
GAGGAACTCACCAACATCACGCCCCAGGATTCTTCCATGCATGAGAAGGT
CAATGCCAGCCTTCAGGAGCTCATTACACTTGGACTTAACTACCGCCACA
TTGAAGCCAGCCAGGCTGCGGCCCAGATCGCTCACGGCCTTCCTGCTTGA
AACCATTCGGGCTACTAAGAATGCACGTAGGCCAGCCCTGCAGACTTCCA
TGTCCCAGACCCAGGTCAAGCAGGATCCTGAATTCTTCCCACCCCTGCCG
GTCAAGGAAACGCTCCGCCAAAAGGCCAAGGAGGGCTCTGATCTTCGGAA
CCCCCGGGATCACCCTTACTACTCCCTGCCTACTCACAATGATGGAAAGT
ACTACTGCCCCTTCGCCAACGGAGAGAAGCCCTGCAACCACCCCCCGACT
ACCCAGAAGTGCGCCTATCAATGTCCACCAAGATCAAGAACGACCCAGAG
AACATGTCTTTGTCCCAGTCATCTTTGCACACTATGGACCACTTGTCTCA
GCCGAGACAAAACCAAATGATCCCGGGGATCCCCAACATGGCCTCCAGAG
GAATCCAGGATGATGAACTTTCGAGCCAGGACAATTTCTCCTTGTGTTCA
AGCACACACCCCAACCACGGAACCCCCAATGACTTAAAGGGGTGGTCTCT
GAGCGACGTGGATGCACTTGACAGTGGTGCGATGTCCAAACCAGAGTCCC
CGGAAGTTCAGATGCTCTCTTTCTCTTTCTCTCAGCAACTGCTGCCATCG
ACCGTTGGCCCCAGTGATGTAATGTATCATCACGCCGGATCCGATTTCTC
AGGCATCCAGGATGTGACTGAACAAAATGACCTGGATTTCTCCCATGCAC
ATGACTTCAACCACTACTCCTCATTGGTTGACCTCTCTGCCTTTGATAAT
GAAGTTTATGGCCAGAATGGTACCCAGTCCTCTTGCACTCCTGATGATAC
TCTCTCCAGCCACAGCTCTCATGCGGATGACGGCCACCTGGCCGGCAATG
AGGCGTGGAACTCGATGAACTACCACGGATCATCCATGGATCAGTATACC
ACCGGCATGTTCCAATCAGTGCCTGTTTCTCCTCCCTTGTCTGACGCCAG
TAATGATGTTTCTGTTACTTCCTCTTGCTCTGCTTCTGGATACCCCACCT
TCATGAGCCATGAAGATGCTATGCTCAAAGATGTTACAACCACTCCCGTT
GGAAGCCATGGAATCAACCTAGGAGACCCATTGTTCCCCCTCACTCCCCC
CTTGAGTGAACAGGACCCCAACAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000555-T1.utr3p1 | KJC3_000555-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013087 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1174366..1178164 - |
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