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KJC3_000556-T1, KJC3_000556-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000556-T1
Unique NameKJC3_000556-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1180965..1182581+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000556-T1 ID=KJC3_000556-T1|Name=KJC3_000556-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1617bp|location=Sequence derived from alignment at ch1:1180965..1182581+ (Aspergillus niger KJC3)
ATGATTAAGCATAAGCTGCTAGAGAAGACTGACTGGGCATCGGTTGCAGC
AGCACGACCACTCACGGTGCTGTTTCCTCCAGTAGAAGCTTTACGAAACT
TCGGGAGGCGGAGAAAAATAACGAATGATGACTGTGAGAGGCTGGGGTCT
TCTGTCCTGCGTCCAGAGCTTACCTACCGCCCCAAGCATCGCGGAGGTGC
AGAGCCTGATACGGAGAGTATACAGAACCTGGACATAAGGATAAATGGGC
AACCCGTTGGAGCTTACCATCCGAGGTGCAATGGCCCGTCAACTGATACT
ACATCGCAGTCAATGCTTTTAGACCATGAGTTCGCACCCACAACGCCGAA
GCCCCCTGTTCATGAGTATGTTTGTGAGAATATCGGCGTGGGAAGCTCAG
TCGTTGAGGGGTCTAGGATACTGGGCTCTTCCAGCGTTTCACCTTTATAT
GTGTCGTCTTCCGATGGAGGATTGTCCCTCCGGAGTAATTTCATGGTCCA
GGGCTCGGATCAGTCCATCGATGAGTCTAAGGGCAAGGAACAACTCGAGG
TTAGAGGTTTGGAAGTACTACAGTCAGCCGACGCCAGCCCAGAAGTTCAA
GAAGCGTGGACTCCGATCAGGAGACGATTTACGCTCGACGACCAGATTCG
CGCTGAAGAGGAGAGAAAGGCGAAGGCCGCTTACGACACATCCTTGGAGA
TAGACGATTGCTCGACTGCTCATCTGTTTCTCCGGGGCCCTTTTAACCCA
AGACTCTCTTCATCAGCTGCAAGTAGCGGTTGGCAGCGAGGATCTATGCA
GGATTCTATGAGCACATCATCGACATTGAACCACTCAAGTTATGGTTGGC
TCCCAGAACCGCGCCAGAACATACAACGACTTATATCACAGAGACCAGAT
GAGGGAGAAATTGATGTGCCTAGTGGATCTAGACAACGAAGCACCACGCT
CGCTCCGCCACGTACAGCAATAAAGCAAATCACCCCCTCCTTGGTAATAT
TTGGCCAGTCTGTTGATCTCGATAGCGGTCTATTCGCTAAGCAAATTGAG
CACGGGGATGAGCAGCAGCAGGCTCAACACGGTTTCACATGTTCTCCCAC
CATAATTTATGAAGCTAACTGTAATATATCAACGGATAACTATCCGTCCA
AGATGACACATCTCCGTCAGCCAGATGACTTTGCATTCTCGCCGAACATG
GTCAAGTCTAGAAAGCCCACCGTAGCGCCAAAGACCGCAAAAATATACAT
CGATCAAGCATGCGCTTCTCCTCTCTTAAGAACAGCGGTACCGGGACGGG
AGTTTTCTGGGATGAACCGGGAGGGTCAGCGTGCCCAGGAGTTGACCAAT
CGATATAGTTTATATAACTAGGTCCAGGCACATGAGACTAACTCGACAGG
ACATCGTCTCATGACCCACTTGTACTACACGGCGTGATAAAGCATGTCAC
TGCTCTGCATAAATGATACTTCGAAGTATGAAAGTGTATATAACACTGTG
AGGCACTCAAGACAATAACCAGCCTCAACAGTAAGTACAATTATGATCCG
TAAAATCGGCAGTCACATGCTAATCTTACGTCAGGTCCCGGAAGCAAGCC
CCGACAACGTGACCTCC
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Coding sequence (CDS) from alignment at ch1:1180965..1182581+

>KJC3_000556-T1 ID=KJC3_000556-T1|Name=KJC3_000556-T1|organism=Aspergillus niger KJC3|type=CDS|length=1371bp|location=Sequence derived from alignment at ch1:1180965..1182581+ (Aspergillus niger KJC3)
ATGATTAAGCATAAGCTGCTAGAGAAGACTGACTGGGCATCGGTTGCAGC
AGCACGACCACTCACGGTGCTGTTTCCTCCAGTAGAAGCTTTACGAAACT
TCGGGAGGCGGAGAAAAATAACGAATGATGACTGTGAGAGGCTGGGGTCT
TCTGTCCTGCGTCCAGAGCTTACCTACCGCCCCAAGCATCGCGGAGGTGC
AGAGCCTGATACGGAGAGTATACAGAACCTGGACATAAGGATAAATGGGC
AACCCGTTGGAGCTTACCATCCGAGGTGCAATGGCCCGTCAACTGATACT
ACATCGCAGTCAATGCTTTTAGACCATGAGTTCGCACCCACAACGCCGAA
GCCCCCTGTTCATGAGTATGTTTGTGAGAATATCGGCGTGGGAAGCTCAG
TCGTTGAGGGGTCTAGGATACTGGGCTCTTCCAGCGTTTCACCTTTATAT
GTGTCGTCTTCCGATGGAGGATTGTCCCTCCGGAGTAATTTCATGGTCCA
GGGCTCGGATCAGTCCATCGATGAGTCTAAGGGCAAGGAACAACTCGAGG
TTAGAGGTTTGGAAGTACTACAGTCAGCCGACGCCAGCCCAGAAGTTCAA
GAAGCGTGGACTCCGATCAGGAGACGATTTACGCTCGACGACCAGATTCG
CGCTGAAGAGGAGAGAAAGGCGAAGGCCGCTTACGACACATCCTTGGAGA
TAGACGATTGCTCGACTGCTCATCTGTTTCTCCGGGGCCCTTTTAACCCA
AGACTCTCTTCATCAGCTGCAAGTAGCGGTTGGCAGCGAGGATCTATGCA
GGATTCTATGAGCACATCATCGACATTGAACCACTCAAGTTATGGTTGGC
TCCCAGAACCGCGCCAGAACATACAACGACTTATATCACAGAGACCAGAT
GAGGGAGAAATTGATGTGCCTAGTGGATCTAGACAACGAAGCACCACGCT
CGCTCCGCCACGTACAGCAATAAAGCAAATCACCCCCTCCTTGGTAATAT
TTGGCCAGTCTGTTGATCTCGATAGCGGTCTATTCGCTAAGCAAATTGAG
CACGGGGATGAGCAGCAGCAGGCTCAACACGGTTTCACATGTTCTCCCAC
CATAATTTATGAAGCTAACTGTAATATATCAACGGATAACTATCCGTCCA
AGATGACACATCTCCGTCAGCCAGATGACTTTGCATTCTCGCCGAACATG
GTCAAGTCTAGAAAGCCCACCGTAGCGCCAAAGACCGCAAAAATATACAT
CGATCAAGCATGCGCTTCTCCTCTCTTAAGAACAGCGGTACCGGGACGGG
AGTTTTCTGGGATGAACCGGGAGGGTCAGCGTGCCCAGGAGTTGACCAAT
CGATATAGTTTATATAACTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000556KJC3_000556Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000556-T1.exon1KJC3_000556-T1.exon1Aspergillus niger KJC3exon
KJC3_000556-T1.exon2KJC3_000556-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000556-T1.cdsKJC3_000556-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000556-T1.utr3p1KJC3_000556-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_000556-T1.utr3p2KJC3_000556-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000556-T1KJC3_000556-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1180965..1182581 +
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